RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 YEATS2Q9ULM3 1422 aa13.56□□□□□ -0.24
USP38-201ENST00000307017 EIF2AK2P19525 551 aaKnown RBP13.56□□□□□ -0.24
USP38-201ENST00000307017 ING2Q9H160 280 aa13.56□□□□□ -0.24
USP38-201ENST00000307017 TXLNGQ9NUQ3 528 aa13.56□□□□□ -0.24
USP38-201ENST00000307017 ANAPC7Q9UJX3 599 aa13.56□□□□□ -0.24
USP38-201ENST00000307017 LINC00854A0A1B0GVQ3 168 aa13.56□□□□□ -0.24
USP38-201ENST00000307017 MAPK13O15264 365 aa13.56□□□□□ -0.24
USP38-201ENST00000307017 HNRNPCP07910 306 aaKnown RBP eCLIP13.56□□□□□ -0.24
USP38-201ENST00000307017 ST13P4Q8IZP2 240 aaPredicted RBP13.56□□□□□ -0.24
USP38-201ENST00000307017 IL17REQ8NFR9 667 aa13.56□□□□□ -0.24
USP38-201ENST00000307017 OR2W6PQ8NHA6 318 aa13.56□□□□□ -0.24
USP38-201ENST00000307017 SNRNP27Q8WVK2 155 aaKnown RBP13.56□□□□□ -0.24
USP38-201ENST00000307017 RIN2Q8WYP3 895 aaPredicted RBP13.56□□□□□ -0.24
USP38-201ENST00000307017 ZSWIM5Q9P217 1185 aa13.56□□□□□ -0.24
USP38-201ENST00000307017 KDSRQ06136 332 aa13.56□□□□□ -0.24
USP38-201ENST00000307017 CCDC33Q8N5R6 958 aa13.56□□□□□ -0.24
USP38-201ENST00000307017 MB21D1Q8N884 522 aa13.56□□□□□ -0.24
USP38-201ENST00000307017 DDX28Q9NUL7 540 aaKnown RBP13.56□□□□□ -0.24
USP38-201ENST00000307017 ASAP1Q9ULH1 1129 aa13.56□□□□□ -0.24
USP38-201ENST00000307017 ADCY3O60266 1144 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 UTS2BQ765I0 119 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 CYFIP1Q7L576 1253 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 ZNF229Q9UJW7 825 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 DBR1Q9UK59 544 aaKnown RBP13.55□□□□□ -0.24
USP38-201ENST00000307017 PHLPP2Q6ZVD8 1323 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 PLA2G4BP0C869 781 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 LRRC8EQ6NSJ5 796 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 KIAA2013Q8IYS2 634 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 KIRREL3Q8IZU9 778 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 LARSQ9P2J5 1176 aaKnown RBP13.55□□□□□ -0.24
USP38-201ENST00000307017 LBRQ14739 615 aaKnown RBP13.55□□□□□ -0.24
USP38-201ENST00000307017 THNSL1Q8IYQ7 743 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 OR6B3Q8NGW1 331 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 TGS1Q96RS0 853 aaKnown RBP13.55□□□□□ -0.24
USP38-201ENST00000307017 IL1RL2Q9HB29 575 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 URB2Q14146 1524 aaKnown RBP13.55□□□□□ -0.24
USP38-201ENST00000307017 CHL1O00533 1208 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 ZBED1O96006 694 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 DEUP1Q05D60 604 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 MYO1EQ12965 1108 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 ISLR2Q6UXK2 745 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 GALNT4Q8N4A0 578 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 KIF2BQ8N4N8 673 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 CPSF3Q9UKF6 684 aaKnown RBP13.55□□□□□ -0.24
USP38-201ENST00000307017 IL17RAQ96F46 866 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 NUDCD1Q96RS6 583 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 ADNPQ9H2P0 1102 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 RGS12O14924 1447 aa13.55□□□□□ -0.24
USP38-201ENST00000307017 RPS8P62241 208 aaKnown RBP13.54□□□□□ -0.24
USP38-201ENST00000307017 PWP1Q13610 501 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 RNPEPQ9H4A4 650 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 EMILIN3Q9NT22 766 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 COPB2P35606 906 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 CRLF3Q8IUI8 442 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 DDIASQ8IXT1 998 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 DDX47Q9H0S4 455 aaKnown RBP13.54□□□□□ -0.24
USP38-201ENST00000307017 MRPL11Q9Y3B7 192 aaKnown RBP13.54□□□□□ -0.24
USP38-201ENST00000307017 MAST3O60307 1309 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 CDC25BP30305 580 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 GCLMP48507 274 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 MXD4Q14582 209 aaPredicted RBP13.54□□□□□ -0.24
USP38-201ENST00000307017 LZTS2Q9BRK4 669 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 IRX2Q9BZI1 471 aaPredicted RBP13.54□□□□□ -0.24
USP38-201ENST00000307017 SERPING1P05155 500 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 PLIN5Q00G26 463 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 KRT17Q04695 432 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 BTNL9Q6UXG8 535 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 SHCBP1LQ9BZQ2 653 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 L3MBTL1Q9Y468 752 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 ABCB11O95342 1321 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 TCIRG1Q13488 830 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 PPM1NQ8N819 430 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 ADAM21Q9UKJ8 722 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 A0A087WUV0 522 aaPredicted RBP13.54□□□□□ -0.24
USP38-201ENST00000307017 UBTFL6P0CB48 400 aaPredicted RBP13.54□□□□□ -0.24
USP38-201ENST00000307017 APOA5Q6Q788 366 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 SYNE4Q8N205 404 aa13.54□□□□□ -0.24
USP38-201ENST00000307017 LRRC53A6NM62 1247 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 ATP1A1P05023 1023 aaKnown RBP13.53□□□□□ -0.24
USP38-201ENST00000307017 KCTD19Q17RG1 926 aaPredicted RBP13.53□□□□□ -0.24
USP38-201ENST00000307017 VSTM4Q8IW00 320 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 ABI1Q8IZP0 508 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 OSBP2Q969R2 916 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 SAAL1Q96ER3 474 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 UBA6A0AVT1 1052 aaPredicted RBP13.53□□□□□ -0.24
USP38-201ENST00000307017 MOCS2O96007 188 aaPredicted RBP13.53□□□□□ -0.24
USP38-201ENST00000307017 MMP1P03956 469 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 TBL3Q12788 808 aaKnown RBP13.53□□□□□ -0.24
USP38-201ENST00000307017 C19orf44Q9H6X5 657 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 STK32BQ9NY57 414 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 PSDA5PKW4 1024 aaPredicted RBP13.53□□□□□ -0.24
USP38-201ENST00000307017 COPEO14579 308 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 TEX33O43247 280 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 PRAMEP78395 509 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 CUL3Q13618 768 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 TBCCQ15814 346 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 ZNF280CQ8ND82 737 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 NEK9Q8TD19 979 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 CHURC1Q8WUH1 139 aa13.53□□□□□ -0.24
USP38-201ENST00000307017 KDM1AO60341 852 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms