RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 NPAS4Q8IUM7 802 aa23.27■■□□□ 1.32
RER1-201ENST00000306256 CKAP2LQ8IYA6 745 aa23.27■■□□□ 1.32
RER1-201ENST00000306256 KIAA0319LQ8IZA0 1049 aa23.27■■□□□ 1.32
RER1-201ENST00000306256 CRIPAKQ8N1N5 446 aa23.27■■□□□ 1.32
RER1-201ENST00000306256 NME8Q8N427 588 aa23.27■■□□□ 1.32
RER1-201ENST00000306256 FBXL16Q8N461 479 aa23.27■■□□□ 1.32
RER1-201ENST00000306256 NEK9Q8TD19 979 aa23.27■■□□□ 1.32
RER1-201ENST00000306256 C1QTNF1Q9BXJ1 281 aa23.27■■□□□ 1.32
RER1-201ENST00000306256 VPS54Q9P1Q0 977 aa23.27■■□□□ 1.32
RER1-201ENST00000306256 REC8O95072 547 aa23.26■■□□□ 1.31
RER1-201ENST00000306256 NFX1Q12986 1120 aaKnown RBP23.26■■□□□ 1.31
RER1-201ENST00000306256 ZNF484Q5JVG2 852 aa23.26■■□□□ 1.31
RER1-201ENST00000306256 MCTP2Q6DN12 878 aa23.26■■□□□ 1.31
RER1-201ENST00000306256 PABPC5Q96DU9 382 aaKnown RBP23.26■■□□□ 1.31
RER1-201ENST00000306256 RNF26Q9BY78 433 aaPredicted RBP23.26■■□□□ 1.31
RER1-201ENST00000306256 NOC2LQ9Y3T9 749 aaKnown RBP23.26■■□□□ 1.31
RER1-201ENST00000306256 MGEA5O60502 916 aa23.25■■□□□ 1.31
RER1-201ENST00000306256 PSMA5P28066 241 aa23.25■■□□□ 1.31
RER1-201ENST00000306256 PDIA3P30101 505 aaKnown RBP23.25■■□□□ 1.31
RER1-201ENST00000306256 ZNF746Q6NUN9 644 aaPredicted RBP23.25■■□□□ 1.31
RER1-201ENST00000306256 FAM178BQ8IXR5 827 aa23.25■■□□□ 1.31
RER1-201ENST00000306256 CMTR2Q8IYT2 770 aaKnown RBP23.25■■□□□ 1.31
RER1-201ENST00000306256 TMEM40Q8WWA1 233 aa23.25■■□□□ 1.31
RER1-201ENST00000306256 LMAN2LQ9H0V9 348 aa23.25■■□□□ 1.31
RER1-201ENST00000306256 ERVK-5Q9HDB9 667 aa23.25■■□□□ 1.31
RER1-201ENST00000306256 ALG13Q9NP73 1137 aaKnown RBP23.25■■□□□ 1.31
RER1-201ENST00000306256 TBC1D22BQ9NU19 505 aa23.25■■□□□ 1.31
RER1-201ENST00000306256 CLDND1Q9NY35 253 aa23.25■■□□□ 1.31
RER1-201ENST00000306256 TCEAL9Q9UHQ7 104 aa23.25■■□□□ 1.31
RER1-201ENST00000306256 GRXCR2A6NFK2 248 aa23.24■■□□□ 1.31
RER1-201ENST00000306256 C22orf31O95567 290 aa23.24■■□□□ 1.31
RER1-201ENST00000306256 STAG3L1P0CL83 205 aa23.24■■□□□ 1.31
RER1-201ENST00000306256 IFNAR1P17181 557 aa23.24■■□□□ 1.31
RER1-201ENST00000306256 COL19A1Q14993 1142 aa23.24■■□□□ 1.31
RER1-201ENST00000306256 CCDC148Q8NFR7 591 aa23.24■■□□□ 1.31
RER1-201ENST00000306256 BICD2Q8TD16 824 aa23.24■■□□□ 1.31
RER1-201ENST00000306256 LENG9Q96B70 501 aa23.24■■□□□ 1.31
RER1-201ENST00000306256 MAFBQ9Y5Q3 323 aaPredicted RBP23.24■■□□□ 1.31
RER1-201ENST00000306256 RPS6KA5O75582 802 aa23.23■■□□□ 1.31
RER1-201ENST00000306256 CIITAP33076 1130 aa23.23■■□□□ 1.31
RER1-201ENST00000306256 HYAL1Q12794 435 aa23.23■■□□□ 1.31
RER1-201ENST00000306256 TOB2Q14106 344 aaPredicted RBP23.23■■□□□ 1.31
RER1-201ENST00000306256 KIZQ2M2Z5 673 aa23.23■■□□□ 1.31
RER1-201ENST00000306256 SMAP1Q8IYB5 467 aaPredicted RBP23.23■■□□□ 1.31
RER1-201ENST00000306256 METTL13Q8N6R0 699 aa23.23■■□□□ 1.31
RER1-201ENST00000306256 BBXQ8WY36 941 aaPredicted RBP23.23■■□□□ 1.31
RER1-201ENST00000306256 PLVAPQ9BX97 442 aa23.23■■□□□ 1.31
RER1-201ENST00000306256 GABBR1Q9UBS5 961 aa23.23■■□□□ 1.31
RER1-201ENST00000306256 LRFN2Q9ULH4 789 aa23.23■■□□□ 1.31
RER1-201ENST00000306256 PLAGL2Q9UPG8 496 aa23.23■■□□□ 1.31
RER1-201ENST00000306256 PCDHA10Q9Y5I2 948 aa23.23■■□□□ 1.31
RER1-201ENST00000306256 EDIL3O43854 480 aa23.22■■□□□ 1.31
RER1-201ENST00000306256 MMP1P03956 469 aa23.22■■□□□ 1.31
RER1-201ENST00000306256 VTNP04004 478 aa23.22■■□□□ 1.31
RER1-201ENST00000306256 PSAPP07602 524 aa23.22■■□□□ 1.31
RER1-201ENST00000306256 SSTR3P32745 418 aaPredicted RBP23.22■■□□□ 1.31
RER1-201ENST00000306256 GTF2F1P35269 517 aaKnown RBP eCLIP23.22■■□□□ 1.314e-7■■■■■ 31.2
RER1-201ENST00000306256 SARSP49591 514 aaKnown RBP23.22■■□□□ 1.31
RER1-201ENST00000306256 EVCP57679 992 aa23.22■■□□□ 1.31
RER1-201ENST00000306256 CAMK1Q14012 370 aa23.22■■□□□ 1.31
RER1-201ENST00000306256 GJD3Q8N144 294 aa23.22■■□□□ 1.31
RER1-201ENST00000306256 OSMRQ99650 979 aa23.22■■□□□ 1.31
RER1-201ENST00000306256 ST3GAL5Q9UNP4 418 aa23.22■■□□□ 1.31
RER1-201ENST00000306256 SAMM50Q9Y512 469 aa23.22■■□□□ 1.31
RER1-201ENST00000306256 ITGB1P05556 798 aa23.21■■□□□ 1.31
RER1-201ENST00000306256 LTBRP36941 435 aa23.21■■□□□ 1.31
RER1-201ENST00000306256 CLCN3P51790 818 aa23.21■■□□□ 1.31
RER1-201ENST00000306256 RUFY3Q7L099 469 aa23.21■■□□□ 1.31
RER1-201ENST00000306256 GJA10Q969M2 543 aa23.21■■□□□ 1.31
RER1-201ENST00000306256 ADAM2Q99965 735 aa23.21■■□□□ 1.31
RER1-201ENST00000306256 LARP6Q9BRS8 491 aaKnown RBP23.21■■□□□ 1.31
RER1-201ENST00000306256 LRFN3Q9BTN0 628 aa23.21■■□□□ 1.31
RER1-201ENST00000306256 DENND3A2RUS2 1198 aa23.2■■□□□ 1.3
RER1-201ENST00000306256 FAM86C2PA6NEL3 165 aa23.2■■□□□ 1.3
RER1-201ENST00000306256 MSH4O15457 936 aa23.2■■□□□ 1.3
RER1-201ENST00000306256 DNAJB1P25685 340 aa23.2■■□□□ 1.3
RER1-201ENST00000306256 NLRP5P59047 1200 aa23.2■■□□□ 1.3
RER1-201ENST00000306256 DLX2Q07687 328 aaPredicted RBP23.2■■□□□ 1.3
RER1-201ENST00000306256 CLUL1Q15846 466 aa23.2■■□□□ 1.3
RER1-201ENST00000306256 PUS10Q3MIT2 529 aaKnown RBP23.2■■□□□ 1.3
RER1-201ENST00000306256 FAM228AQ86W67 206 aa23.2■■□□□ 1.3
RER1-201ENST00000306256 KLHL23Q8NBE8 558 aa23.2■■□□□ 1.3
RER1-201ENST00000306256 P2RX5Q93086 422 aa23.2■■□□□ 1.3
RER1-201ENST00000306256 IGFLR1Q9H665 355 aa23.2■■□□□ 1.3
RER1-201ENST00000306256 ZSWIM6Q9HCJ5 1215 aa23.2■■□□□ 1.3
RER1-201ENST00000306256 PCDHB7Q9Y5E2 793 aa23.2■■□□□ 1.3
RER1-201ENST00000306256 WDR64B1ANS9 1081 aa23.19■■□□□ 1.3
RER1-201ENST00000306256 CHMP2AO43633 222 aa23.19■■□□□ 1.3
RER1-201ENST00000306256 ZNF862O60290 1169 aa23.19■■□□□ 1.3
RER1-201ENST00000306256 TMEM31Q5JXX7 168 aa23.19■■□□□ 1.3
RER1-201ENST00000306256 SPPL3Q8TCT6 385 aa23.19■■□□□ 1.3
RER1-201ENST00000306256 C11orf16Q9NQ32 467 aa23.19■■□□□ 1.3
RER1-201ENST00000306256 DISC1Q9NRI5 854 aa23.19■■□□□ 1.3
RER1-201ENST00000306256 GPR182O15218 404 aa23.18■■□□□ 1.3
RER1-201ENST00000306256 LINC01565O15544 149 aa23.18■■□□□ 1.3
RER1-201ENST00000306256 GPR32O75388 356 aa23.18■■□□□ 1.3
RER1-201ENST00000306256 CRYBB1P53674 252 aaPredicted RBP23.18■■□□□ 1.3
RER1-201ENST00000306256 SSRP1Q08945 709 aaKnown RBP23.18■■□□□ 1.3
RER1-201ENST00000306256 UGCGQ16739 394 aa23.18■■□□□ 1.3
RER1-201ENST00000306256 CTC1Q2NKJ3 1217 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms