RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 PRKCEQ02156 737 aa29.8■■■□□ 2.36
CDKN2A-201ENST00000304494 B3GNT9Q6UX72 402 aa29.8■■■□□ 2.36
CDKN2A-201ENST00000304494 ZSCAN31Q96LW9 406 aaPredicted RBP29.8■■■□□ 2.36
CDKN2A-201ENST00000304494 UNC80Q8N2C7 3258 aa29.8■■■□□ 2.36
CDKN2A-201ENST00000304494 MAGEB2O15479 319 aa29.79■■■□□ 2.36
CDKN2A-201ENST00000304494 MMP1P03956 469 aa29.79■■■□□ 2.36
CDKN2A-201ENST00000304494 RBM25P49756 843 aaKnown RBP29.79■■■□□ 2.36
CDKN2A-201ENST00000304494 KIAA0319LQ8IZA0 1049 aa29.79■■■□□ 2.36
CDKN2A-201ENST00000304494 YME1L1Q96TA2 773 aa29.79■■■□□ 2.36
CDKN2A-201ENST00000304494 FTHL17Q9BXU8 183 aa29.79■■■□□ 2.36
CDKN2A-201ENST00000304494 MYH9P35579 1960 aaKnown RBP29.79■■■□□ 2.36
CDKN2A-201ENST00000304494 TBX3O15119 743 aa29.78■■■□□ 2.36
CDKN2A-201ENST00000304494 ZNF862O60290 1169 aa29.78■■■□□ 2.36
CDKN2A-201ENST00000304494 CD52P31358 61 aa29.78■■■□□ 2.36
CDKN2A-201ENST00000304494 NR5A1Q13285 461 aa29.78■■■□□ 2.36
CDKN2A-201ENST00000304494 FAM43BQ6ZT52 329 aaPredicted RBP29.78■■■□□ 2.36
CDKN2A-201ENST00000304494 TGS1Q96RS0 853 aaKnown RBP29.78■■■□□ 2.36
CDKN2A-201ENST00000304494 KIF2CQ99661 725 aa29.78■■■□□ 2.36
CDKN2A-201ENST00000304494 LLPHQ9BRT6 129 aaKnown RBP29.78■■■□□ 2.36
CDKN2A-201ENST00000304494 AGO3Q9H9G7 860 aaKnown RBP29.78■■■□□ 2.36
CDKN2A-201ENST00000304494 KCNMB3Q9NPA1 279 aa29.78■■■□□ 2.36
CDKN2A-201ENST00000304494 LINC01553A4QN01 128 aa29.77■■■□□ 2.36
CDKN2A-201ENST00000304494 GTPBP6O43824 516 aaPredicted RBP29.77■■■□□ 2.36
CDKN2A-201ENST00000304494 UPP2O95045 317 aa29.77■■■□□ 2.36
CDKN2A-201ENST00000304494 ST3GAL1Q11201 340 aa29.77■■■□□ 2.36
CDKN2A-201ENST00000304494 PAK2Q13177 524 aa29.77■■■□□ 2.36
CDKN2A-201ENST00000304494 UGCGQ16739 394 aa29.77■■■□□ 2.36
CDKN2A-201ENST00000304494 METTL13Q8N6R0 699 aa29.77■■■□□ 2.36
CDKN2A-201ENST00000304494 SP7Q8TDD2 431 aaPredicted RBP29.77■■■□□ 2.36
CDKN2A-201ENST00000304494 TNFRSF25Q93038 417 aa29.77■■■□□ 2.36
CDKN2A-201ENST00000304494 SH2B1Q9NRF2 756 aaPredicted RBP29.77■■■□□ 2.36
CDKN2A-201ENST00000304494 ENPP3O14638 875 aa29.76■■■□□ 2.35
CDKN2A-201ENST00000304494 MARCH6O60337 910 aa29.76■■■□□ 2.35
CDKN2A-201ENST00000304494 TMOD1P28289 359 aa29.76■■■□□ 2.35
CDKN2A-201ENST00000304494 ERVK-21P61565 698 aa29.76■■■□□ 2.35
CDKN2A-201ENST00000304494 EARS2Q5JPH6 523 aaKnown RBP29.76■■■□□ 2.35
CDKN2A-201ENST00000304494 CCDC83Q8IWF9 413 aa29.76■■■□□ 2.35
CDKN2A-201ENST00000304494 UPF2Q9HAU5 1272 aaKnown RBP29.76■■■□□ 2.35
CDKN2A-201ENST00000304494 PADI3Q9ULW8 664 aa29.76■■■□□ 2.35
CDKN2A-201ENST00000304494 GINS2Q9Y248 185 aa29.76■■■□□ 2.35
CDKN2A-201ENST00000304494 EPOPA6NHQ4 379 aa29.75■■■□□ 2.35
CDKN2A-201ENST00000304494 RFXAPO00287 272 aa29.75■■■□□ 2.35
CDKN2A-201ENST00000304494 POU3F3P20264 500 aaPredicted RBP29.75■■■□□ 2.35
CDKN2A-201ENST00000304494 PPP2R5CQ13362 524 aa29.75■■■□□ 2.35
CDKN2A-201ENST00000304494 ODR4Q5SWX8 454 aa29.75■■■□□ 2.35
CDKN2A-201ENST00000304494 KRT40Q6A162 431 aa29.75■■■□□ 2.35
CDKN2A-201ENST00000304494 DIS3L2Q8IYB7 885 aaKnown RBP29.75■■■□□ 2.35
CDKN2A-201ENST00000304494 PRUNE2Q8WUY3 3088 aa29.75■■■□□ 2.35
CDKN2A-201ENST00000304494 PPM1EQ8WY54 764 aa29.75■■■□□ 2.35
CDKN2A-201ENST00000304494 XKR3Q5GH77 459 aa29.74■■■□□ 2.35
CDKN2A-201ENST00000304494 SLFN12Q8IYM2 578 aa29.74■■■□□ 2.35
CDKN2A-201ENST00000304494 ZNF710Q8N1W2 664 aa29.74■■■□□ 2.35
CDKN2A-201ENST00000304494 MAP7D2Q96T17 732 aa29.74■■■□□ 2.35
CDKN2A-201ENST00000304494 VAV3Q9UKW4 847 aa29.74■■■□□ 2.35
CDKN2A-201ENST00000304494 COL4A6Q14031 1691 aa29.73■■■□□ 2.35
CDKN2A-201ENST00000304494 BTBD18B2RXH4 712 aa29.73■■■□□ 2.35
CDKN2A-201ENST00000304494 BAG4O95429 457 aaKnown RBP29.73■■■□□ 2.35
CDKN2A-201ENST00000304494 FOSBP53539 338 aa29.73■■■□□ 2.35
CDKN2A-201ENST00000304494 CRYBB1P53674 252 aaPredicted RBP29.73■■■□□ 2.35
CDKN2A-201ENST00000304494 SAFBQ15424 915 aaKnown RBP eCLIP29.73■■■□□ 2.35
CDKN2A-201ENST00000304494 EFCAB12Q6NXP0 572 aa29.73■■■□□ 2.35
CDKN2A-201ENST00000304494 SPRED2Q7Z698 418 aa29.73■■■□□ 2.35
CDKN2A-201ENST00000304494 NIFKQ9BYG3 293 aaKnown RBP29.73■■■□□ 2.35
CDKN2A-201ENST00000304494 SEPT9Q9UHD8 586 aaPredicted RBP29.73■■■□□ 2.35
CDKN2A-201ENST00000304494 FAM205CA6NFA0 338 aa29.72■■■□□ 2.35
CDKN2A-201ENST00000304494 DKC1O60832 514 aaKnown RBP eCLIP29.72■■■□□ 2.35
CDKN2A-201ENST00000304494 RPS6KA5O75582 802 aa29.72■■■□□ 2.35
CDKN2A-201ENST00000304494 CLCN3P51790 818 aa29.72■■■□□ 2.35
CDKN2A-201ENST00000304494 PSMC5P62195 406 aa29.72■■■□□ 2.35
CDKN2A-201ENST00000304494 HMGN5P82970 282 aaKnown RBP29.72■■■□□ 2.35
CDKN2A-201ENST00000304494 TBC1D8BQ0IIM8 1120 aa29.72■■■□□ 2.35
CDKN2A-201ENST00000304494 CCDC85BQ15834 202 aaPredicted RBP29.72■■■□□ 2.35
CDKN2A-201ENST00000304494 POTEDQ86YR6 584 aa29.72■■■□□ 2.35
CDKN2A-201ENST00000304494 IL27Q8NEV9 243 aa29.72■■■□□ 2.35
CDKN2A-201ENST00000304494 HAS1Q92839 578 aa29.72■■■□□ 2.35
CDKN2A-201ENST00000304494 SAMD11Q96NU1 681 aa29.72■■■□□ 2.35
CDKN2A-201ENST00000304494 MTUS1Q9ULD2 1270 aa29.72■■■□□ 2.35
CDKN2A-201ENST00000304494 MTCH2Q9Y6C9 303 aa29.72■■■□□ 2.35
CDKN2A-201ENST00000304494 TRANK1O15050 2925 aa29.72■■■□□ 2.35
CDKN2A-201ENST00000304494 VTNP04004 478 aa29.71■■■□□ 2.35
CDKN2A-201ENST00000304494 GRB10Q13322 594 aa29.71■■■□□ 2.35
CDKN2A-201ENST00000304494 RABEP1Q15276 862 aa29.71■■■□□ 2.35
CDKN2A-201ENST00000304494 KIZQ2M2Z5 673 aa29.71■■■□□ 2.35
CDKN2A-201ENST00000304494 MICALL1Q8N3F8 863 aa29.71■■■□□ 2.35
CDKN2A-201ENST00000304494 LINC01465Q8N7H1 131 aa29.71■■■□□ 2.35
CDKN2A-201ENST00000304494 CDHR5Q9HBB8 845 aa29.71■■■□□ 2.35
CDKN2A-201ENST00000304494 AKT3Q9Y243 479 aa29.71■■■□□ 2.35
CDKN2A-201ENST00000304494 WDR81Q562E7 1941 aa29.71■■■□□ 2.35
CDKN2A-201ENST00000304494 A0A0C4DFX4 3053 aa29.7■■■□□ 2.35
CDKN2A-201ENST00000304494 GPR182O15218 404 aa29.7■■■□□ 2.35
CDKN2A-201ENST00000304494 NFX1Q12986 1120 aaKnown RBP29.7■■■□□ 2.35
CDKN2A-201ENST00000304494 TARBP2Q15633 366 aaKnown RBP29.7■■■□□ 2.35
CDKN2A-201ENST00000304494 TMEM266Q2M3C6 531 aa29.7■■■□□ 2.35
CDKN2A-201ENST00000304494 BANK1Q8NDB2 785 aa29.7■■■□□ 2.35
CDKN2A-201ENST00000304494 C8orf76Q96K31 380 aa29.7■■■□□ 2.35
CDKN2A-201ENST00000304494 TSPYL2Q9H2G4 693 aaPredicted RBP29.7■■■□□ 2.35
CDKN2A-201ENST00000304494 NOC2LQ9Y3T9 749 aaKnown RBP29.7■■■□□ 2.35
CDKN2A-201ENST00000304494 EML1O00423 815 aa29.69■■■□□ 2.34
CDKN2A-201ENST00000304494 GPR32O75388 356 aa29.69■■■□□ 2.34
CDKN2A-201ENST00000304494 QARSP47897 775 aaKnown RBP29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms