RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 CELF4Q9BZC1 486 aaKnown RBP6.63□□□□□ -1.35
ZNF440-201ENST00000304060 CCDC69A6NI79 296 aa6.63□□□□□ -1.35
ZNF440-201ENST00000304060 CTC1Q2NKJ3 1217 aa6.63□□□□□ -1.35
ZNF440-201ENST00000304060 CCDC184Q52MB2 194 aa6.63□□□□□ -1.35
ZNF440-201ENST00000304060 CLP1Q92989 425 aaKnown RBP6.63□□□□□ -1.35
ZNF440-201ENST00000304060 RILPL2Q969X0 211 aa6.63□□□□□ -1.35
ZNF440-201ENST00000304060 ADAM7Q9H2U9 754 aa6.63□□□□□ -1.35
ZNF440-201ENST00000304060 RNPEPQ9H4A4 650 aa6.63□□□□□ -1.35
ZNF440-201ENST00000304060 ELAC1Q9H777 363 aaKnown RBP6.63□□□□□ -1.35
ZNF440-201ENST00000304060 CD320Q9NPF0 282 aa6.63□□□□□ -1.35
ZNF440-201ENST00000304060 KLRF2D3W0D1 207 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 HAS3O00219 553 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 PDHBP11177 359 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 AOC1P19801 751 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 SFPQP23246 707 aaKnown RBP eCLIP6.62□□□□□ -1.35
ZNF440-201ENST00000304060 MCM5P33992 734 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 CTDSPL2Q05D32 466 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 ZMYM1Q5SVZ6 1142 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 CCDC62Q6P9F0 684 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 C1orf228Q6PIY5 440 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 METTL13Q8N6R0 699 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 KLHL5Q96PQ7 755 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 IER2Q9BTL4 223 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 UBA5Q9GZZ9 404 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 WNT16Q9UBV4 365 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 ANAPC4Q9UJX5 808 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 IFIT3O14879 490 aaKnown RBP6.62□□□□□ -1.35
ZNF440-201ENST00000304060 CYFIP1Q7L576 1253 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 CCDC105Q8IYK2 499 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 CCDC26Q8TAB7 109 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 GCOM2Q9BZD3 368 aaPredicted RBP6.62□□□□□ -1.35
ZNF440-201ENST00000304060 C22orf23Q9BZE7 217 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.62□□□□□ -1.35
ZNF440-201ENST00000304060 AKT3Q9Y243 479 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 SAMM50Q9Y512 469 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 C8orf34Q49A92 452 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 TTBK2Q6IQ55 1244 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 PDXDC1Q6P996 788 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 VSIG10LQ86VR7 867 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 YAF2Q8IY57 180 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 DNAJB3Q8WWF6 145 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 APOL5Q9BWW9 433 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 MRPL17Q9NRX2 175 aaKnown RBP6.62□□□□□ -1.35
ZNF440-201ENST00000304060 LIMD1Q9UGP4 676 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 NAV1Q8NEY1 1877 aa6.62□□□□□ -1.35
ZNF440-201ENST00000304060 PNMA6FA0A0J9YX94 578 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 MX1P20591 662 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 UBA1P22314 1058 aaKnown RBP6.61□□□□□ -1.35
ZNF440-201ENST00000304060 SP100P23497 879 aaPredicted RBP6.61□□□□□ -1.35
ZNF440-201ENST00000304060 CD52P31358 61 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 STAT5BP51692 787 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 FBXO47Q5MNV8 452 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 ELMOD1Q8N336 334 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 NETO1Q8TDF5 533 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 RASGRP4Q8TDF6 673 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 OSBP2Q969R2 916 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 ADAM2Q99965 735 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 COLEC11Q9BWP8 271 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 APOL6Q9BWW8 343 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 UBN1Q9NPG3 1134 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 FRMPD3Q5JV73 1810 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 SMIM35A0A1B0GVV1 85 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 SORBS3O60504 671 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 ITGB1P05556 798 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 ELF1P32519 619 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 WTAPQ15007 396 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 PTPAQ15257 358 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 RSPO2Q6UXX9 243 aaPredicted RBP6.61□□□□□ -1.35
ZNF440-201ENST00000304060 COLGALT1Q8NBJ5 622 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 FGD4Q96M96 766 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 RCAN3Q9UKA8 241 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 SIT1Q9Y3P8 196 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 MAN2B1O00754 1011 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 MARK3P27448 753 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 DDIT3P35638 169 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 PLCB3Q01970 1234 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 VARS2Q5ST30 1063 aaKnown RBP6.61□□□□□ -1.35
ZNF440-201ENST00000304060 CPLX2Q6PUV4 134 aaKnown RBP6.61□□□□□ -1.35
ZNF440-201ENST00000304060 ZSCAN10Q96SZ4 725 aaPredicted RBP6.61□□□□□ -1.35
ZNF440-201ENST00000304060 MRPL42Q9Y6G3 142 aaKnown RBP6.61□□□□□ -1.35
ZNF440-201ENST00000304060 CACNA1BQ00975 2339 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 ADCY6O43306 1168 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 DGKIO75912 1065 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 RGS20O76081 388 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 TCF7P36402 384 aaPredicted RBP6.61□□□□□ -1.35
ZNF440-201ENST00000304060 AMPD2Q01433 879 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 PDXDC2PQ6P474 469 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 KCNT2Q6UVM3 1135 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 HAUS6Q7Z4H7 955 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 TMCO2Q7Z6W1 182 aaPredicted RBP6.61□□□□□ -1.35
ZNF440-201ENST00000304060 CREBRFQ8IUR6 639 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 ADGRF4Q8IZF3 695 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 SIX5Q8N196 739 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 SLC9A2Q9UBY0 812 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 FBXO4Q9UKT5 387 aa6.61□□□□□ -1.35
ZNF440-201ENST00000304060 CACNA1HO95180 2353 aa6.6□□□□□ -1.35
ZNF440-201ENST00000304060 COL1A2P08123 1366 aa6.6□□□□□ -1.35
ZNF440-201ENST00000304060 RIF1Q5UIP0 2472 aaKnown RBP6.6□□□□□ -1.35
ZNF440-201ENST00000304060 TCF15Q12870 199 aa6.6□□□□□ -1.35
ZNF440-201ENST00000304060 MTMR1Q13613 665 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms