RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 ALDH5A1P51649 535 aaPredicted RBP11.68□□□□□ -0.54
CLP1-201ENST00000302731 FKBP1BP68106 108 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 ZBED6P86452 979 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 CDK17Q00537 523 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 MAPK7Q13164 816 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 SNAPC2Q13487 334 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 MYBPC2Q14324 1141 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 PWP2Q15269 919 aaKnown RBP11.68□□□□□ -0.54
CLP1-201ENST00000302731 MEA1Q16626 185 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 MOB2Q70IA6 237 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 REXO1L1PQ8IX06 675 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 ZNF397Q8NF99 534 aaPredicted RBP11.68□□□□□ -0.54
CLP1-201ENST00000302731 GOLGA5Q8TBA6 731 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 TMEM174Q8WUU8 243 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 STRA6Q9BX79 667 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 ST6GALNAC4Q9H4F1 302 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 METTL14Q9HCE5 456 aaKnown RBP11.68□□□□□ -0.54
CLP1-201ENST00000302731 JPH1Q9HDC5 661 aaPredicted RBP11.68□□□□□ -0.54
CLP1-201ENST00000302731 SIK3Q9Y2K2 1263 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 POTEB2H3BUK9 544 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 HIP1RO75146 1068 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 CNMDO75829 334 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 PPP1R37O75864 691 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 PRPF6O94906 941 aaKnown RBP11.68□□□□□ -0.54
CLP1-201ENST00000302731 PSAPP07602 524 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 ODR4Q5SWX8 454 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 OTUD6AQ7L8S5 288 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 DAW1Q8N136 415 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 FAM133AQ8N9E0 248 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 KIF18AQ8NI77 898 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 DRC1Q96MC2 740 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 CCDC43Q96MW1 224 aaKnown RBP11.68□□□□□ -0.54
CLP1-201ENST00000302731 MPHOSPH6Q99547 160 aaKnown RBP11.68□□□□□ -0.54
CLP1-201ENST00000302731 MKNK1Q9BUB5 465 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 CGNQ9P2M7 1197 aaKnown RBP11.68□□□□□ -0.54
CLP1-201ENST00000302731 SLC9A2Q9UBY0 812 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 SLC45A1Q9Y2W3 748 aa11.68□□□□□ -0.54
CLP1-201ENST00000302731 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.68□□□□□ -0.54
CLP1-201ENST00000302731 ASTN1O14525 1302 aa11.67□□□□□ -0.54
CLP1-201ENST00000302731 SOWAHDA6NJG2 315 aa11.67□□□□□ -0.54
CLP1-201ENST00000302731 RASSF10A6NK89 507 aa11.67□□□□□ -0.54
CLP1-201ENST00000302731 SFI1A8K8P3 1242 aa11.67□□□□□ -0.54
CLP1-201ENST00000302731 RNF225M0QZC1 329 aaPredicted RBP11.67□□□□□ -0.54
CLP1-201ENST00000302731 TGFB1I1O43294 461 aa11.67□□□□□ -0.54
CLP1-201ENST00000302731 NR3C1P04150 777 aa11.67□□□□□ -0.54
CLP1-201ENST00000302731 TGFB3P10600 412 aa11.67□□□□□ -0.54
CLP1-201ENST00000302731 PLS3P13797 630 aa11.67□□□□□ -0.54
CLP1-201ENST00000302731 HNRNPH3P31942 346 aaKnown RBP11.67□□□□□ -0.54
CLP1-201ENST00000302731 SNRPFP62306 86 aaKnown RBP11.67□□□□□ -0.54
CLP1-201ENST00000302731 GPAT2Q6NUI2 795 aa11.67□□□□□ -0.54
CLP1-201ENST00000302731 RAD9BQ6WBX8 426 aa11.67□□□□□ -0.54
CLP1-201ENST00000302731 NCAPG2Q86XI2 1143 aa11.67□□□□□ -0.54
CLP1-201ENST00000302731 SHCBP1Q8NEM2 672 aa11.67□□□□□ -0.54
CLP1-201ENST00000302731 MYRIPQ8NFW9 859 aa11.67□□□□□ -0.54
CLP1-201ENST00000302731 SLC10A4Q96EP9 437 aa11.67□□□□□ -0.54
CLP1-201ENST00000302731 TMEM206Q9H813 350 aa11.67□□□□□ -0.54
CLP1-201ENST00000302731 C17orf75Q9HAS0 396 aa11.67□□□□□ -0.54
CLP1-201ENST00000302731 PNMA3Q9UL41 463 aa11.67□□□□□ -0.54
CLP1-201ENST00000302731 ADGRG1Q9Y653 693 aa11.67□□□□□ -0.54
CLP1-201ENST00000302731 KIAA1217Q5T5P2 1943 aa11.67□□□□□ -0.54
CLP1-201ENST00000302731 ZMYM2Q9UBW7 1377 aa11.66□□□□□ -0.54
CLP1-201ENST00000302731 NKRFO15226 690 aaKnown RBP eCLIP11.66□□□□□ -0.54
CLP1-201ENST00000302731 ATG7O95352 703 aa11.66□□□□□ -0.54
CLP1-201ENST00000302731 EPB41P11171 864 aaKnown RBP11.66□□□□□ -0.54
CLP1-201ENST00000302731 ERCC3P19447 782 aa11.66□□□□□ -0.54
CLP1-201ENST00000302731 NMT1P30419 496 aaKnown RBP11.66□□□□□ -0.54
CLP1-201ENST00000302731 GTF2F1P35269 517 aaKnown RBP eCLIP11.66□□□□□ -0.54
CLP1-201ENST00000302731 ETF1P62495 437 aaKnown RBP11.66□□□□□ -0.54
CLP1-201ENST00000302731 ERVK-24P63145 666 aa11.66□□□□□ -0.54
CLP1-201ENST00000302731 CNTN2Q02246 1040 aa11.66□□□□□ -0.54
CLP1-201ENST00000302731 UGCGQ16739 394 aa11.66□□□□□ -0.54
CLP1-201ENST00000302731 MIS18BP1Q6P0N0 1132 aa11.66□□□□□ -0.54
CLP1-201ENST00000302731 ABHD15Q6UXT9 468 aa11.66□□□□□ -0.54
CLP1-201ENST00000302731 TOGARAM2Q6ZUX3 1019 aa11.66□□□□□ -0.54
CLP1-201ENST00000302731 HS2ST1Q7LGA3 356 aa11.66□□□□□ -0.54
CLP1-201ENST00000302731 SLC9A9Q8IVB4 645 aa11.66□□□□□ -0.54
CLP1-201ENST00000302731 PCMTD1Q96MG8 357 aaPredicted RBP11.66□□□□□ -0.54
CLP1-201ENST00000302731 GBP3Q9H0R5 595 aa11.66□□□□□ -0.54
CLP1-201ENST00000302731 MROH8Q9H579 483 aa11.66□□□□□ -0.54
CLP1-201ENST00000302731 ZNHIT6Q9NWK9 470 aaKnown RBP11.66□□□□□ -0.54
CLP1-201ENST00000302731 RBPJLQ9UBG7 517 aa11.66□□□□□ -0.54
CLP1-201ENST00000302731 ARMCX3Q9UH62 379 aaPredicted RBP11.66□□□□□ -0.54
CLP1-201ENST00000302731 MYH11P35749 1972 aa11.66□□□□□ -0.54
CLP1-201ENST00000302731 GJA5P36382 358 aa11.65□□□□□ -0.54
CLP1-201ENST00000302731 RTP1P59025 263 aa11.65□□□□□ -0.54
CLP1-201ENST00000302731 ACTR2P61160 394 aa11.65□□□□□ -0.54
CLP1-201ENST00000302731 XKR9Q5GH70 373 aa11.65□□□□□ -0.54
CLP1-201ENST00000302731 KCNV1Q6PIU1 500 aa11.65□□□□□ -0.54
CLP1-201ENST00000302731 ANO5Q75V66 913 aa11.65□□□□□ -0.54
CLP1-201ENST00000302731 CCDC170Q8IYT3 715 aa11.65□□□□□ -0.54
CLP1-201ENST00000302731 HVCN1Q96D96 273 aa11.65□□□□□ -0.54
CLP1-201ENST00000302731 PAGR1Q9BTK6 254 aa11.65□□□□□ -0.54
CLP1-201ENST00000302731 NUCKS1Q9H1E3 243 aaKnown RBP11.65□□□□□ -0.54
CLP1-201ENST00000302731 AGPAT5Q9NUQ2 364 aa11.65□□□□□ -0.54
CLP1-201ENST00000302731 DMAC2Q9NW81 257 aa11.65□□□□□ -0.54
CLP1-201ENST00000302731 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.65□□□□□ -0.54
CLP1-201ENST00000302731 GABBR1Q9UBS5 961 aa11.65□□□□□ -0.54
CLP1-201ENST00000302731 KCNG1Q9UIX4 513 aa11.65□□□□□ -0.54
CLP1-201ENST00000302731 PLAGL2Q9UPG8 496 aa11.65□□□□□ -0.54
CLP1-201ENST00000302731 PHLPP2Q6ZVD8 1323 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms