RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 ZNF277Q9NRM2 450 aaPredicted RBP22.4■■□□□ 1.18
LTBP3-201ENST00000301873 CNOT8Q9UFF9 292 aaKnown RBP22.4■■□□□ 1.18
LTBP3-201ENST00000301873 ARHGEF40Q8TER5 1519 aa22.4■■□□□ 1.18
LTBP3-201ENST00000301873 CCDC188H7C350 402 aa22.39■■□□□ 1.18
LTBP3-201ENST00000301873 MCF2LO15068 1137 aa22.39■■□□□ 1.18
LTBP3-201ENST00000301873 ZNF211Q13398 564 aaPredicted RBP22.39■■□□□ 1.18
LTBP3-201ENST00000301873 ALS2CLQ60I27 953 aa22.39■■□□□ 1.18
LTBP3-201ENST00000301873 DDX47Q9H0S4 455 aaKnown RBP22.39■■□□□ 1.18
LTBP3-201ENST00000301873 NGRNQ9NPE2 291 aaKnown RBP22.39■■□□□ 1.18
LTBP3-201ENST00000301873 PALM3A6NDB9 673 aaPredicted RBP22.39■■□□□ 1.17
LTBP3-201ENST00000301873 TRIM49P0CI25 452 aa22.39■■□□□ 1.17
LTBP3-201ENST00000301873 TRIM49CP0CI26 452 aa22.39■■□□□ 1.17
LTBP3-201ENST00000301873 MAP2K2P36507 400 aa22.39■■□□□ 1.17
LTBP3-201ENST00000301873 HNRNPH2P55795 449 aaKnown RBP22.39■■□□□ 1.17
LTBP3-201ENST00000301873 PDIA6Q15084 440 aa22.39■■□□□ 1.17
LTBP3-201ENST00000301873 PLA2G12BQ9BX93 195 aa22.39■■□□□ 1.17
LTBP3-201ENST00000301873 ADAM22Q9P0K1 906 aa22.39■■□□□ 1.17
LTBP3-201ENST00000301873 WDR91A4D1P6 747 aa22.39■■□□□ 1.17
LTBP3-201ENST00000301873 MKRN3Q13064 507 aaKnown RBP22.39■■□□□ 1.17
LTBP3-201ENST00000301873 ZHX2Q9Y6X8 837 aa22.39■■□□□ 1.17
LTBP3-201ENST00000301873 ECE2O60344 883 aa22.39■■□□□ 1.17
LTBP3-201ENST00000301873 MUM1Q2TAK8 710 aa22.39■■□□□ 1.17
LTBP3-201ENST00000301873 SCYL3Q8IZE3 742 aa22.39■■□□□ 1.17
LTBP3-201ENST00000301873 KLHL29Q96CT2 875 aa22.39■■□□□ 1.17
LTBP3-201ENST00000301873 ZMYND12Q9H0C1 365 aa22.39■■□□□ 1.17
LTBP3-201ENST00000301873 EXOC1LA0A1B0GW35 172 aa22.38■■□□□ 1.17
LTBP3-201ENST00000301873 CTDNEP1O95476 244 aa22.38■■□□□ 1.17
LTBP3-201ENST00000301873 PRELPP51888 382 aa22.38■■□□□ 1.17
LTBP3-201ENST00000301873 RTKN2Q8IZC4 609 aa22.38■■□□□ 1.17
LTBP3-201ENST00000301873 DNAAF3Q8N9W5 541 aa22.38■■□□□ 1.17
LTBP3-201ENST00000301873 FAM81BQ96LP2 452 aa22.38■■□□□ 1.17
LTBP3-201ENST00000301873 ANO9A1A5B4 782 aa22.38■■□□□ 1.17
LTBP3-201ENST00000301873 SLMAPQ14BN4 828 aa22.38■■□□□ 1.17
LTBP3-201ENST00000301873 E2F5Q15329 346 aa22.38■■□□□ 1.17
LTBP3-201ENST00000301873 NLRP7Q8WX94 980 aa22.38■■□□□ 1.17
LTBP3-201ENST00000301873 CHD1O14646 1710 aa22.38■■□□□ 1.17
LTBP3-201ENST00000301873 IPO5O00410 1097 aaKnown RBP22.38■■□□□ 1.17
LTBP3-201ENST00000301873 XPOTO43592 962 aaKnown RBP22.38■■□□□ 1.17
LTBP3-201ENST00000301873 ZRANB2O95218 330 aaKnown RBP eCLIP22.38■■□□□ 1.17
LTBP3-201ENST00000301873 GSTA1P08263 222 aa22.38■■□□□ 1.17
LTBP3-201ENST00000301873 GSTA2P09210 222 aa22.38■■□□□ 1.17
LTBP3-201ENST00000301873 HOXA7P31268 230 aaPredicted RBP22.38■■□□□ 1.17
LTBP3-201ENST00000301873 MSH2P43246 934 aa22.38■■□□□ 1.17
LTBP3-201ENST00000301873 RCN2Q14257 317 aa22.38■■□□□ 1.17
LTBP3-201ENST00000301873 PASD1Q8IV76 773 aa22.38■■□□□ 1.17
LTBP3-201ENST00000301873 EPB41L4AQ9HCS5 686 aaPredicted RBP22.38■■□□□ 1.17
LTBP3-201ENST00000301873 RGL1Q9NZL6 768 aa22.38■■□□□ 1.17
LTBP3-201ENST00000301873 CA4P22748 312 aa22.37■■□□□ 1.17
LTBP3-201ENST00000301873 DARS2Q6PI48 645 aaKnown RBP22.37■■□□□ 1.17
LTBP3-201ENST00000301873 TMED8Q6PL24 325 aaPredicted RBP22.37■■□□□ 1.17
LTBP3-201ENST00000301873 ZNF668Q96K58 619 aaPredicted RBP22.37■■□□□ 1.17
LTBP3-201ENST00000301873 PHLDB3Q6NSJ2 640 aa22.37■■□□□ 1.17
LTBP3-201ENST00000301873 KCTD6Q8NC69 237 aa22.37■■□□□ 1.17
LTBP3-201ENST00000301873 TNS3Q68CZ2 1445 aa22.37■■□□□ 1.17
LTBP3-201ENST00000301873 ALCAMQ13740 583 aa22.37■■□□□ 1.17
LTBP3-201ENST00000301873 DRAP1Q14919 205 aaPredicted RBP22.37■■□□□ 1.17
LTBP3-201ENST00000301873 CDO1Q16878 200 aa22.37■■□□□ 1.17
LTBP3-201ENST00000301873 ZNF34Q8IZ26 560 aa22.37■■□□□ 1.17
LTBP3-201ENST00000301873 FAM49AQ9H0Q0 323 aaPredicted RBP22.37■■□□□ 1.17
LTBP3-201ENST00000301873 ABCB11O95342 1321 aa22.37■■□□□ 1.17
LTBP3-201ENST00000301873 ERICH1Q86X53 443 aa22.37■■□□□ 1.17
LTBP3-201ENST00000301873 RPUSD2Q8IZ73 545 aaKnown RBP22.37■■□□□ 1.17
LTBP3-201ENST00000301873 GSDMBQ8TAX9 411 aa22.37■■□□□ 1.17
LTBP3-201ENST00000301873 HEXIM2Q96MH2 286 aaKnown RBP22.37■■□□□ 1.17
LTBP3-201ENST00000301873 WDR64B1ANS9 1081 aa22.36■■□□□ 1.17
LTBP3-201ENST00000301873 FXR1P51114 621 aaKnown RBP eCLIP22.36■■□□□ 1.17
LTBP3-201ENST00000301873 ARHGEF18Q6ZSZ5 1173 aa22.36■■□□□ 1.17
LTBP3-201ENST00000301873 GLYCTKQ8IVS8 523 aa22.36■■□□□ 1.17
LTBP3-201ENST00000301873 MCUQ8NE86 351 aa22.36■■□□□ 1.17
LTBP3-201ENST00000301873 GDAP1Q8TB36 358 aa22.36■■□□□ 1.17
LTBP3-201ENST00000301873 FAM193BQ96PV7 902 aaPredicted RBP22.36■■□□□ 1.17
LTBP3-201ENST00000301873 OSBPL9Q96SU4 736 aa22.36■■□□□ 1.17
LTBP3-201ENST00000301873 FAM213AQ9BRX8 229 aa22.36■■□□□ 1.17
LTBP3-201ENST00000301873 SLC38A10Q9HBR0 1119 aa22.36■■□□□ 1.17
LTBP3-201ENST00000301873 CLDN3O15551 220 aa22.36■■□□□ 1.17
LTBP3-201ENST00000301873 RAB3IPQ96QF0 476 aaPredicted RBP22.36■■□□□ 1.17
LTBP3-201ENST00000301873 SPZ1Q9BXG8 430 aa22.36■■□□□ 1.17
LTBP3-201ENST00000301873 PLAAQ9Y263 795 aa22.36■■□□□ 1.17
LTBP3-201ENST00000301873 UNC13BO14795 1591 aa22.36■■□□□ 1.17
LTBP3-201ENST00000301873 DENND3A2RUS2 1198 aa22.36■■□□□ 1.17
LTBP3-201ENST00000301873 STK4Q13043 487 aa22.36■■□□□ 1.17
LTBP3-201ENST00000301873 DALRD3Q5D0E6 543 aaKnown RBP22.36■■□□□ 1.17
LTBP3-201ENST00000301873 CCSER1Q9C0I3 900 aa22.36■■□□□ 1.17
LTBP3-201ENST00000301873 LRRC4Q9HBW1 653 aa22.36■■□□□ 1.17
LTBP3-201ENST00000301873 LAMC1P11047 1609 aa22.35■■□□□ 1.17
LTBP3-201ENST00000301873 ABCA6Q8N139 1617 aa22.35■■□□□ 1.17
LTBP3-201ENST00000301873 SPDYE16A6NNV3 312 aaPredicted RBP22.35■■□□□ 1.17
LTBP3-201ENST00000301873 ZNF18P17022 549 aa22.35■■□□□ 1.17
LTBP3-201ENST00000301873 SPDYE2Q495Y8 402 aa22.35■■□□□ 1.17
LTBP3-201ENST00000301873 FAM133BQ5BKY9 247 aaKnown RBP22.35■■□□□ 1.17
LTBP3-201ENST00000301873 SNX25Q9H3E2 840 aa22.35■■□□□ 1.17
LTBP3-201ENST00000301873 MT-ND3P03897 115 aa22.35■■□□□ 1.17
LTBP3-201ENST00000301873 MCPH1Q8NEM0 835 aa22.35■■□□□ 1.17
LTBP3-201ENST00000301873 C11orf70Q9BRQ4 267 aa22.35■■□□□ 1.17
LTBP3-201ENST00000301873 RNF146Q9NTX7 359 aa22.35■■□□□ 1.17
LTBP3-201ENST00000301873 GRIN1Q05586 938 aa22.35■■□□□ 1.17
LTBP3-201ENST00000301873 NUGGCQ68CJ6 796 aa22.35■■□□□ 1.17
LTBP3-201ENST00000301873 HIBCHQ6NVY1 386 aaPredicted RBP22.35■■□□□ 1.17
LTBP3-201ENST00000301873 PDIK1LQ8N165 341 aa22.35■■□□□ 1.17
LTBP3-201ENST00000301873 MARCH10Q8NA82 808 aaPredicted RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms