RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 NFIBO00712 420 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 BACH1O14867 736 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 TLR2O60603 784 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 NR3C1P04150 777 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 EPB41P11171 864 aaKnown RBP17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 LRRC63Q05C16 580 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 WDR78Q5VTH9 848 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 LMBRD2Q68DH5 695 aaPredicted RBP17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 TRAPPC11Q7Z392 1133 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 SAMD7Q7Z3H4 446 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 SPATA4Q8NEY3 305 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 EGFRP00533 1210 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 NPEPPSP55786 919 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 GIT2Q14161 759 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 GRIPAP1Q4V328 841 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 STRIP1Q5VSL9 837 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 DAAM2Q86T65 1068 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 ZDHHC15Q96MV8 337 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 SELENOOQ9BVL4 669 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 LRRC27Q9C0I9 530 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 SUGT1Q9Y2Z0 365 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 SMCHD1A6NHR9 2005 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 CEP350Q5VT06 3117 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 K7ENM7 598 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 SSR1P43307 286 aaKnown RBP17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 USP14P54578 494 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 CKAP4Q07065 602 aaKnown RBP17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 EEPD1Q7L9B9 569 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 WDR11Q9BZH6 1224 aa17.06■□□□□ 0.32
CHAF1A-201ENST00000301280 ASTN2O75129 1339 aaPredicted RBP17.05■□□□□ 0.32
CHAF1A-201ENST00000301280 SPATA31A6Q5VVP1 1343 aa17.05■□□□□ 0.32
CHAF1A-201ENST00000301280 A0A1W2PQJ5 194 aa17.05■□□□□ 0.32
CHAF1A-201ENST00000301280 MYO1CO00159 1063 aa17.05■□□□□ 0.32
CHAF1A-201ENST00000301280 GCLMP48507 274 aa17.05■□□□□ 0.32
CHAF1A-201ENST00000301280 PLA2G4FQ68DD2 849 aa17.05■□□□□ 0.32
CHAF1A-201ENST00000301280 HS2ST1Q7LGA3 356 aa17.05■□□□□ 0.32
CHAF1A-201ENST00000301280 CLK2P49760 499 aaKnown RBP17.05■□□□□ 0.32
CHAF1A-201ENST00000301280 KNOP1Q1ED39 458 aaKnown RBP17.05■□□□□ 0.32
CHAF1A-201ENST00000301280 EPC2Q52LR7 807 aa17.05■□□□□ 0.32
CHAF1A-201ENST00000301280 PPP4R3AQ6IN85 833 aa17.05■□□□□ 0.32
CHAF1A-201ENST00000301280 FAM186BQ8IYM0 893 aa17.05■□□□□ 0.32
CHAF1A-201ENST00000301280 ZSWIM2Q8NEG5 633 aa17.05■□□□□ 0.32
CHAF1A-201ENST00000301280 EXOC4Q96A65 974 aa17.05■□□□□ 0.32
CHAF1A-201ENST00000301280 ERGIC2Q96RQ1 377 aa17.05■□□□□ 0.32
CHAF1A-201ENST00000301280 SH2D4AQ9H788 454 aa17.05■□□□□ 0.32
CHAF1A-201ENST00000301280 GOLGA6BA6NDN3 693 aa17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 HNRNPH3P31942 346 aaKnown RBP17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 ALKBH5Q6P6C2 394 aaKnown RBP17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 RETREG2Q8NC44 543 aa17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 SAAL1Q96ER3 474 aa17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 WDR18Q9BV38 432 aa17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 GBP3Q9H0R5 595 aa17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 DDX47Q9H0S4 455 aaKnown RBP17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 KDM3AQ9Y4C1 1321 aa17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 ATMINO43313 823 aaPredicted RBP17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 HEXIM1O94992 359 aaKnown RBP17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 KRT14P02533 472 aa17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 DLATP10515 647 aaKnown RBP17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 CARSP49589 748 aaKnown RBP17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 FAM102BQ5T8I3 360 aa17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 LDHDQ86WU2 507 aa17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 SLFN12Q8IYM2 578 aa17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 OR2W6PQ8NHA6 318 aa17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 AJAP1Q9UKB5 411 aaPredicted RBP17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 SNX12Q9UMY4 172 aa17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 RGPD3A6NKT7 1758 aaPredicted RBP17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 RGPD4Q7Z3J3 1758 aa17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 SPATA31C1P0DKV0 1188 aa17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 CCDC170Q8IYT3 715 aa17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 IL31RAQ8NI17 732 aa17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 JRKLQ9Y4A0 524 aa17.04■□□□□ 0.32
CHAF1A-201ENST00000301280 ATP2C2O75185 946 aa17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 AFPP02771 609 aaKnown RBP17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 INPP5BP32019 993 aa17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 ODF2Q5BJF6 829 aa17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 MIER3Q7Z3K6 550 aa17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 IQCDQ96DY2 449 aa17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 LXNQ9BS40 222 aa17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 ACBD3Q9H3P7 528 aa17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 TLDC2A0PJX2 215 aa17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 UCHL3P15374 230 aa17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 FAM212AQ96EL1 285 aa17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 IPO5O00410 1097 aaKnown RBP17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 PPP1R12BO60237 982 aaPredicted RBP17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 KRT13P13646 458 aa17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 GCFC2P16383 781 aaKnown RBP17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 TMEM119Q4V9L6 283 aa17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 PLCD3Q8N3E9 789 aa17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 BAP1Q92560 729 aa17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 POP1Q99575 1024 aaKnown RBP17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 OSGEPQ9NPF4 335 aa17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 WRAP73Q9P2S5 460 aaPredicted RBP17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 ZNF70Q9UC06 446 aaPredicted RBP17.03■□□□□ 0.32
CHAF1A-201ENST00000301280 SLC16A4O15374 487 aa17.02■□□□□ 0.32
CHAF1A-201ENST00000301280 ZNF571Q7Z3V5 609 aaPredicted RBP17.02■□□□□ 0.32
CHAF1A-201ENST00000301280 PPM1KQ8N3J5 372 aa17.02■□□□□ 0.32
CHAF1A-201ENST00000301280 LUC7LQ9NQ29 371 aaKnown RBP17.02■□□□□ 0.32
CHAF1A-201ENST00000301280 PSD3Q9NYI0 1048 aa17.02■□□□□ 0.32
CHAF1A-201ENST00000301280 SLX4Q8IY92 1834 aa17.02■□□□□ 0.32
CHAF1A-201ENST00000301280 POTEB2H3BUK9 544 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms