RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 TBX3O15119 743 aa14.12□□□□□ -0.15
HIF3A-204ENST00000300862 FAM153BP0C7A2 387 aa14.12□□□□□ -0.15
HIF3A-204ENST00000300862 GUCY2DQ02846 1103 aa14.12□□□□□ -0.15
HIF3A-204ENST00000300862 COG2Q14746 738 aa14.12□□□□□ -0.15
HIF3A-204ENST00000300862 FAM153CQ494X1 144 aa14.12□□□□□ -0.15
HIF3A-204ENST00000300862 DNAJC21Q5F1R6 531 aaKnown RBP14.12□□□□□ -0.15
HIF3A-204ENST00000300862 MEI1Q5TIA1 1274 aa14.12□□□□□ -0.15
HIF3A-204ENST00000300862 RINT1Q6NUQ1 792 aa14.12□□□□□ -0.15
HIF3A-204ENST00000300862 ARHGAP27Q6ZUM4 889 aa14.12□□□□□ -0.15
HIF3A-204ENST00000300862 FRMD5Q7Z6J6 570 aa14.12□□□□□ -0.15
HIF3A-204ENST00000300862 RABEP2Q9H5N1 569 aa14.12□□□□□ -0.15
HIF3A-204ENST00000300862 EPB41L5Q9HCM4 733 aa14.12□□□□□ -0.15
HIF3A-204ENST00000300862 FAM153AQ9UHL3 310 aa14.12□□□□□ -0.15
HIF3A-204ENST00000300862 NFU1Q9UMS0 254 aa14.12□□□□□ -0.15
HIF3A-204ENST00000300862 CLRN2A0PK11 232 aa14.12□□□□□ -0.15
HIF3A-204ENST00000300862 CALUO43852 315 aaPredicted RBP14.12□□□□□ -0.15
HIF3A-204ENST00000300862 PPFIA4O75335 1185 aa14.12□□□□□ -0.15
HIF3A-204ENST00000300862 FOSP01100 380 aaPredicted RBP14.12□□□□□ -0.15
HIF3A-204ENST00000300862 KLHL7Q8IXQ5 586 aa14.12□□□□□ -0.15
HIF3A-204ENST00000300862 DYDC2Q96IM9 177 aa14.12□□□□□ -0.15
HIF3A-204ENST00000300862 PCDHGC5Q9Y5F6 944 aa14.12□□□□□ -0.15
HIF3A-204ENST00000300862 GOLGA6CA6NDK9 693 aa14.11□□□□□ -0.15
HIF3A-204ENST00000300862 PDXKO00764 312 aa14.11□□□□□ -0.15
HIF3A-204ENST00000300862 HEXIM1O94992 359 aaKnown RBP14.11□□□□□ -0.15
HIF3A-204ENST00000300862 GOLGA6DP0CG33 693 aa14.11□□□□□ -0.15
HIF3A-204ENST00000300862 EPHA7Q15375 998 aa14.11□□□□□ -0.15
HIF3A-204ENST00000300862 TTC19Q6DKK2 380 aaPredicted RBP14.11□□□□□ -0.15
HIF3A-204ENST00000300862 MYCT1Q8N699 235 aa14.11□□□□□ -0.15
HIF3A-204ENST00000300862 SLC35C1Q96A29 364 aa14.11□□□□□ -0.15
HIF3A-204ENST00000300862 GOLGA6AQ9NYA3 693 aa14.11□□□□□ -0.15
HIF3A-204ENST00000300862 GCNT4Q9P109 453 aa14.11□□□□□ -0.15
HIF3A-204ENST00000300862 IGLV3-22A0A075B6J6 115 aa14.11□□□□□ -0.15
HIF3A-204ENST00000300862 KCNK3O14649 394 aa14.11□□□□□ -0.15
HIF3A-204ENST00000300862 TGFB1I1O43294 461 aa14.11□□□□□ -0.15
HIF3A-204ENST00000300862 CIITAP33076 1130 aa14.11□□□□□ -0.15
HIF3A-204ENST00000300862 GUCY2FP51841 1108 aa14.11□□□□□ -0.15
HIF3A-204ENST00000300862 INPP4AQ96PE3 977 aaPredicted RBP14.11□□□□□ -0.15
HIF3A-204ENST00000300862 TYW1Q9NV66 732 aaKnown RBP14.11□□□□□ -0.15
HIF3A-204ENST00000300862 TSKSQ9UJT2 592 aa14.11□□□□□ -0.15
HIF3A-204ENST00000300862 NAGPAQ9UK23 515 aa14.11□□□□□ -0.15
HIF3A-204ENST00000300862 SERPINA10Q9UK55 444 aa14.11□□□□□ -0.15
HIF3A-204ENST00000300862 COL11A2P13942 1736 aaPredicted RBP14.1□□□□□ -0.15
HIF3A-204ENST00000300862 SLITRK3O94933 977 aa14.1□□□□□ -0.15
HIF3A-204ENST00000300862 FAM13AO94988 1023 aa14.1□□□□□ -0.15
HIF3A-204ENST00000300862 EYA4O95677 639 aa14.1□□□□□ -0.15
HIF3A-204ENST00000300862 EPB41P11171 864 aaKnown RBP14.1□□□□□ -0.15
HIF3A-204ENST00000300862 MMP14P50281 582 aa14.1□□□□□ -0.15
HIF3A-204ENST00000300862 EPHB4P54760 987 aa14.1□□□□□ -0.15
HIF3A-204ENST00000300862 LRCH2Q5VUJ6 765 aa14.1□□□□□ -0.15
HIF3A-204ENST00000300862 ALKBH5Q6P6C2 394 aaKnown RBP14.1□□□□□ -0.15
HIF3A-204ENST00000300862 AKT1S1Q96B36 256 aa14.1□□□□□ -0.15
HIF3A-204ENST00000300862 ARL8AQ96BM9 186 aa14.1□□□□□ -0.15
HIF3A-204ENST00000300862 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.1□□□□□ -0.15
HIF3A-204ENST00000300862 SIX2Q9NPC8 291 aa14.1□□□□□ -0.15
HIF3A-204ENST00000300862 GFPT2O94808 682 aa14.1□□□□□ -0.15
HIF3A-204ENST00000300862 APBA3O96018 575 aa14.1□□□□□ -0.15
HIF3A-204ENST00000300862 STAT2P52630 851 aa14.1□□□□□ -0.15
HIF3A-204ENST00000300862 PLS1Q14651 629 aa14.1□□□□□ -0.15
HIF3A-204ENST00000300862 OTOP1Q7RTM1 612 aa14.1□□□□□ -0.15
HIF3A-204ENST00000300862 FAM76AQ8TAV0 307 aa14.1□□□□□ -0.15
HIF3A-204ENST00000300862 PPM1EQ8WY54 764 aa14.1□□□□□ -0.15
HIF3A-204ENST00000300862 HSD17B14Q9BPX1 270 aa14.1□□□□□ -0.15
HIF3A-204ENST00000300862 MRIQ9BWK5 157 aa14.1□□□□□ -0.15
HIF3A-204ENST00000300862 PLCB1Q9NQ66 1216 aa14.1□□□□□ -0.15
HIF3A-204ENST00000300862 WRAP73Q9P2S5 460 aaPredicted RBP14.1□□□□□ -0.15
HIF3A-204ENST00000300862 BCS1LQ9Y276 419 aa14.1□□□□□ -0.15
HIF3A-204ENST00000300862 H0YIN7 160 aa14.09□□□□□ -0.15
HIF3A-204ENST00000300862 HDLBPQ00341 1268 aaKnown RBP14.09□□□□□ -0.15
HIF3A-204ENST00000300862 GBP6Q6ZN66 633 aa14.09□□□□□ -0.15
HIF3A-204ENST00000300862 CDAN1Q8IWY9 1227 aa14.09□□□□□ -0.15
HIF3A-204ENST00000300862 POLR3CQ9BUI4 534 aaPredicted RBP14.09□□□□□ -0.15
HIF3A-204ENST00000300862 PKD2L1Q9P0L9 805 aa14.09□□□□□ -0.15
HIF3A-204ENST00000300862 TMCO5BA8MYB1 307 aa14.09□□□□□ -0.15
HIF3A-204ENST00000300862 SLC26A4O43511 780 aa14.09□□□□□ -0.15
HIF3A-204ENST00000300862 KRT14P02533 472 aa14.09□□□□□ -0.15
HIF3A-204ENST00000300862 RPL13P26373 211 aaKnown RBP14.09□□□□□ -0.15
HIF3A-204ENST00000300862 GTF2A1P52655 376 aaPredicted RBP14.09□□□□□ -0.15
HIF3A-204ENST00000300862 RPS6KA1Q15418 735 aa14.09□□□□□ -0.15
HIF3A-204ENST00000300862 KCTD16Q68DU8 428 aa14.09□□□□□ -0.15
HIF3A-204ENST00000300862 MAEAQ7L5Y9 396 aa14.09□□□□□ -0.15
HIF3A-204ENST00000300862 CNPY4Q8N129 248 aa14.09□□□□□ -0.15
HIF3A-204ENST00000300862 CASKIN2Q8WXE0 1202 aa14.09□□□□□ -0.15
HIF3A-204ENST00000300862 AP1M1Q9BXS5 423 aa14.09□□□□□ -0.15
HIF3A-204ENST00000300862 YDJCA8MPS7 323 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 DDX39AO00148 427 aaKnown RBP14.08□□□□□ -0.16
HIF3A-204ENST00000300862 RAD51CO43502 376 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 CEP104O60308 925 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 CYP2J2P51589 502 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 IRX3P78415 501 aaPredicted RBP14.08□□□□□ -0.16
HIF3A-204ENST00000300862 EMBQ6PCB8 327 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 BTNL9Q6UXG8 535 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 C1orf186Q6ZWK4 172 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 IFT20Q8IY31 132 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 SH2D3CQ8N5H7 860 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 RDH13Q8NBN7 331 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 TAF4BQ92750 862 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 ZIM3Q96PE6 472 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 FBXO28Q9NVF7 368 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 ZMYM2Q9UBW7 1377 aa14.08□□□□□ -0.16
HIF3A-204ENST00000300862 DDX3XO00571 662 aaKnown RBP eCLIP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms