RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ERVV-1B6SEH8 477 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 DNAJC8O75937 253 aaPredicted RBP15.93■□□□□ 0.14
COL6A2-201ENST00000300527 GALNT17Q6IS24 598 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 ARMC9Q7Z3E5 817 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 GPR101Q96P66 508 aaPredicted RBP15.93■□□□□ 0.14
COL6A2-201ENST00000300527 EYA3Q99504 573 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 EDEM3Q9BZQ6 932 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 DUOX1Q9NRD9 1551 aa15.93■□□□□ 0.14
COL6A2-201ENST00000300527 CCDC188H7C350 402 aa15.92■□□□□ 0.14
COL6A2-201ENST00000300527 FGRP09769 529 aa15.92■□□□□ 0.14
COL6A2-201ENST00000300527 ALDH5A1P51649 535 aaPredicted RBP15.92■□□□□ 0.14
COL6A2-201ENST00000300527 SLC51AQ86UW1 340 aa15.92■□□□□ 0.14
COL6A2-201ENST00000300527 TXNRD3Q86VQ6 643 aa15.92■□□□□ 0.14
COL6A2-201ENST00000300527 TRIM59Q8IWR1 403 aa15.92■□□□□ 0.14
COL6A2-201ENST00000300527 LMBR1Q8WVP7 490 aa15.92■□□□□ 0.14
COL6A2-201ENST00000300527 LBHD1Q9BQE6 289 aaPredicted RBP15.92■□□□□ 0.14
COL6A2-201ENST00000300527 GOLGA6L10A0A0M3HER8 536 aa15.92■□□□□ 0.14
COL6A2-201ENST00000300527 GALCP54803 685 aa15.92■□□□□ 0.14
COL6A2-201ENST00000300527 ARHGAP44Q17R89 818 aa15.92■□□□□ 0.14
COL6A2-201ENST00000300527 ERVK-5Q9HDB9 667 aa15.92■□□□□ 0.14
COL6A2-201ENST00000300527 AJAP1Q9UKB5 411 aaPredicted RBP15.92■□□□□ 0.14
COL6A2-201ENST00000300527 RTCBQ9Y3I0 505 aaKnown RBP15.92■□□□□ 0.14
COL6A2-201ENST00000300527 TCP11X1B4DZS4 312 aa15.92■□□□□ 0.14
COL6A2-201ENST00000300527 ADCY7P51828 1080 aa15.92■□□□□ 0.14
COL6A2-201ENST00000300527 UBE4AQ14139 1066 aa15.92■□□□□ 0.14
COL6A2-201ENST00000300527 LACTB2Q53H82 288 aaPredicted RBP15.92■□□□□ 0.14
COL6A2-201ENST00000300527 C12orf60Q5U649 245 aa15.92■□□□□ 0.14
COL6A2-201ENST00000300527 NUGGCQ68CJ6 796 aa15.92■□□□□ 0.14
COL6A2-201ENST00000300527 RAB17Q9H0T7 212 aa15.92■□□□□ 0.14
COL6A2-201ENST00000300527 GANQ9H2C0 597 aa15.92■□□□□ 0.14
COL6A2-201ENST00000300527 PNMA3Q9UL41 463 aa15.92■□□□□ 0.14
COL6A2-201ENST00000300527 PPP1R9AQ9ULJ8 1098 aa15.92■□□□□ 0.14
COL6A2-201ENST00000300527 TIAM2Q8IVF5 1701 aa15.92■□□□□ 0.14
COL6A2-201ENST00000300527 C5orf60A6NFR6 353 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 ACSL3O95573 720 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 PLCG2P16885 1265 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 RBM46Q8TBY0 533 aaKnown RBP15.91■□□□□ 0.14
COL6A2-201ENST00000300527 NSRP1Q9H0G5 558 aaKnown RBP15.91■□□□□ 0.14
COL6A2-201ENST00000300527 IKZF4Q9H2S9 585 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 PCDHA12Q9UN75 941 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 C15orf41Q9Y2V0 281 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 XRCC5P13010 732 aaKnown RBP15.91■□□□□ 0.14
COL6A2-201ENST00000300527 CRKLP46109 303 aaKnown RBP15.91■□□□□ 0.14
COL6A2-201ENST00000300527 CASP5P51878 434 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 SARNPP82979 210 aaKnown RBP15.91■□□□□ 0.14
COL6A2-201ENST00000300527 PABPC4Q13310 644 aaKnown RBP eCLIP15.91■□□□□ 0.14
COL6A2-201ENST00000300527 IRF2BP2Q7Z5L9 587 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 LRRC57Q8N9N7 239 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 DAGLBQ8NCG7 672 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 SLC17A8Q8NDX2 589 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 RNF25Q96BH1 459 aaPredicted RBP15.91■□□□□ 0.14
COL6A2-201ENST00000300527 C18orf8Q96DM3 657 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 NOP53Q9NZM5 478 aaKnown RBP15.91■□□□□ 0.14
COL6A2-201ENST00000300527 GCNT4Q9P109 453 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 DDX25Q9UHL0 483 aaKnown RBP15.91■□□□□ 0.14
COL6A2-201ENST00000300527 PALM3A6NDB9 673 aaPredicted RBP15.91■□□□□ 0.14
COL6A2-201ENST00000300527 CCDC169A6NNP5 214 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 SFI1A8K8P3 1242 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 EVI5O60447 810 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 PLA2G4BP0C869 781 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 TLDC1Q6P9B6 456 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 ERICH1Q86X53 443 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 PROM2Q8N271 834 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 SCFD1Q8WVM8 642 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 TRPC6Q9Y210 931 aa15.91■□□□□ 0.14
COL6A2-201ENST00000300527 SLC16A2P36021 539 aa15.9■□□□□ 0.14
COL6A2-201ENST00000300527 LONRF1Q17RB8 773 aa15.9■□□□□ 0.14
COL6A2-201ENST00000300527 C1orf131Q8NDD1 294 aaKnown RBP15.9■□□□□ 0.14
COL6A2-201ENST00000300527 SYN2Q92777 582 aaPredicted RBP15.9■□□□□ 0.14
COL6A2-201ENST00000300527 SLITRK6Q9H5Y7 841 aa15.9■□□□□ 0.14
COL6A2-201ENST00000300527 BCAS3Q9H6U6 928 aa15.9■□□□□ 0.14
COL6A2-201ENST00000300527 AIPL1Q9NZN9 384 aa15.9■□□□□ 0.14
COL6A2-201ENST00000300527 TBK1Q9UHD2 729 aa15.9■□□□□ 0.14
COL6A2-201ENST00000300527 EME2A4GXA9 379 aaPredicted RBP15.9■□□□□ 0.14
COL6A2-201ENST00000300527 POTEFA5A3E0 1075 aa15.9■□□□□ 0.14
COL6A2-201ENST00000300527 PPP1R12AO14974 1030 aaPredicted RBP15.9■□□□□ 0.14
COL6A2-201ENST00000300527 LRRN2O75325 713 aa15.9■□□□□ 0.14
COL6A2-201ENST00000300527 AFPP02771 609 aaKnown RBP15.9■□□□□ 0.14
COL6A2-201ENST00000300527 POTEIP0CG38 1075 aa15.9■□□□□ 0.14
COL6A2-201ENST00000300527 CAPRIN2Q6IMN6 1127 aaKnown RBP15.9■□□□□ 0.14
COL6A2-201ENST00000300527 POTEGQ6S5H5 508 aa15.9■□□□□ 0.14
COL6A2-201ENST00000300527 POTEEQ6S8J3 1075 aa15.9■□□□□ 0.14
COL6A2-201ENST00000300527 CTNNBL1Q8WYA6 563 aaPredicted RBP15.9■□□□□ 0.14
COL6A2-201ENST00000300527 DNAJC19Q96DA6 116 aa15.9■□□□□ 0.14
COL6A2-201ENST00000300527 ZBTB10Q96DT7 871 aa15.9■□□□□ 0.14
COL6A2-201ENST00000300527 ZNF804BA4D1E1 1349 aa15.89■□□□□ 0.14
COL6A2-201ENST00000300527 CREB1P16220 341 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 KCNJ1P48048 391 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 CASP4P49662 377 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 TNIP1Q15025 636 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 BZW1Q7L1Q6 419 aaKnown RBP15.89■□□□□ 0.13
COL6A2-201ENST00000300527 NT5DC3Q86UY8 548 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 C3orf20Q8ND61 904 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 SLC35G2Q8TBE7 412 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 CALR3Q96L12 384 aaKnown RBP15.89■□□□□ 0.13
COL6A2-201ENST00000300527 CCDC87Q9NVE4 849 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 DDX3XO00571 662 aaKnown RBP eCLIP15.89■□□□□ 0.13
COL6A2-201ENST00000300527 NTSR2O95665 410 aa15.89■□□□□ 0.13
COL6A2-201ENST00000300527 NQO1P15559 274 aaKnown RBP15.89■□□□□ 0.13
COL6A2-201ENST00000300527 VPS41P49754 854 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 1049.1 ms