RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 CALCOCO2Q13137 446 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 EPS8L3Q8TE67 593 aaKnown RBP12.37□□□□□ -0.43
TRUB1-201ENST00000298746 SYN2Q92777 582 aaPredicted RBP12.37□□□□□ -0.43
TRUB1-201ENST00000298746 GCNT4Q9P109 453 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 TBK1Q9UHD2 729 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 DISP2A7MBM2 1401 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 C1orf167Q5SNV9 1468 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 SRRM3A6NNA2 597 aaPredicted RBP12.37□□□□□ -0.43
TRUB1-201ENST00000298746 H0YGN5 161 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 MEIS1O00470 390 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 HIP1RO75146 1068 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 C10orf76Q5T2E6 689 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 AP1ARQ63HQ0 302 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 LRRC4CQ9HCJ2 640 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 C15orf41Q9Y2V0 281 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 NFS1Q9Y697 457 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 ECM29Q5VYK3 1845 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 F8W031 263 aaPredicted RBP12.37□□□□□ -0.43
TRUB1-201ENST00000298746 MGRN1O60291 552 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 VPS41P49754 854 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 CCNHP51946 323 aaPredicted RBP12.37□□□□□ -0.43
TRUB1-201ENST00000298746 GALCP54803 685 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 PABPC4Q13310 644 aaKnown RBP eCLIP12.37□□□□□ -0.43
TRUB1-201ENST00000298746 PARP10Q53GL7 1025 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 CADPS2Q86UW7 1296 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 LRRC47Q8N1G4 583 aaKnown RBP12.37□□□□□ -0.43
TRUB1-201ENST00000298746 LZTS2Q9BRK4 669 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 CARD10Q9BWT7 1032 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 FGFBP2Q9BYJ0 223 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 SEMA4AQ9H3S1 761 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 NR2E1Q9Y466 385 aa12.37□□□□□ -0.43
TRUB1-201ENST00000298746 POTEB3A0JP26 581 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 CFAP73A6NFT4 308 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 POTECB2RU33 542 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 UPP2O95045 317 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 PLA2G4BP0C869 781 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 PLCG2P16885 1265 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 STX2P32856 288 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 C6orf118Q5T5N4 469 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 POTEBQ6S5H4 581 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 RDH13Q8NBN7 331 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 C1orf131Q8NDD1 294 aaKnown RBP12.36□□□□□ -0.43
TRUB1-201ENST00000298746 CEP63Q96MT8 703 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 TRPC6Q9Y210 931 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 SIPA1L3O60292 1781 aaPredicted RBP12.36□□□□□ -0.43
TRUB1-201ENST00000298746 BCL9LQ86UU0 1499 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 GCNT3O95395 438 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 GHRP10912 638 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 INTS8Q75QN2 995 aaKnown RBP12.36□□□□□ -0.43
TRUB1-201ENST00000298746 CCHCR1Q8TD31 782 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 SH3RF3Q8TEJ3 882 aaPredicted RBP12.36□□□□□ -0.43
TRUB1-201ENST00000298746 ZBTB10Q96DT7 871 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 ERP44Q9BS26 406 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 TRIM7Q9C029 511 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 KLHL14Q9P2G3 628 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 A0A1W2PRG0 241 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 H0Y3Z8 333 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 RBAK-RBAKDNI3L0D1 243 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 LRRN2O75325 713 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 TBCAO75347 108 aaKnown RBP12.36□□□□□ -0.43
TRUB1-201ENST00000298746 ALDH5A1P51649 535 aaPredicted RBP12.36□□□□□ -0.43
TRUB1-201ENST00000298746 GNPTABQ3T906 1256 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 LACTB2Q53H82 288 aaPredicted RBP12.36□□□□□ -0.43
TRUB1-201ENST00000298746 TRIM59Q8IWR1 403 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 FBF1Q8TES7 1133 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 CELF1Q92879 486 aaKnown RBP12.36□□□□□ -0.43
TRUB1-201ENST00000298746 PABPC3Q9H361 631 aaKnown RBP12.36□□□□□ -0.43
TRUB1-201ENST00000298746 CHORDC1Q9UHD1 332 aaPredicted RBP12.36□□□□□ -0.43
TRUB1-201ENST00000298746 MINPP1Q9UNW1 487 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 ZNF652Q9Y2D9 606 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 CHD4Q14839 1912 aa12.36□□□□□ -0.43
TRUB1-201ENST00000298746 ABCB11O95342 1321 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 KIF1AQ12756 1690 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 PPIP5K2O43314 1243 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 PDHA1P08559 390 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 NQO1P15559 274 aaKnown RBP12.35□□□□□ -0.43
TRUB1-201ENST00000298746 ECHS1P30084 290 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 ADCY2Q08462 1091 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 IKQ13123 557 aaPredicted RBP12.35□□□□□ -0.43
TRUB1-201ENST00000298746 NKX1-1Q15270 411 aaPredicted RBP12.35□□□□□ -0.43
TRUB1-201ENST00000298746 LONRF1Q17RB8 773 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 KIAA1755Q5JYT7 1200 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 ZFYVE27Q5T4F4 411 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 FAM47EQ6ZV65 393 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 SPICE1Q8N0Z3 855 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 SLC35G2Q8TBE7 412 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.35□□□□□ -0.43
TRUB1-201ENST00000298746 AIPL1Q9NZN9 384 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 ASIC3Q9UHC3 531 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 A8MUI8 341 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 USP17L5A8MUK1 530 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 SESN3P58005 492 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 IRX1P78414 480 aaPredicted RBP12.35□□□□□ -0.43
TRUB1-201ENST00000298746 ERFEQ4G0M1 354 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 C12orf60Q5U649 245 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 EMC10Q5UCC4 262 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 JAMLQ86YT9 394 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 MRRFQ96E11 262 aaKnown RBP12.35□□□□□ -0.43
TRUB1-201ENST00000298746 FAXDC2Q96IV6 333 aa12.35□□□□□ -0.43
TRUB1-201ENST00000298746 SLC4A9Q96Q91 983 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms