RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 DCP1AQ9NPI6 582 aaPredicted RBP7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 SNAP23O00161 211 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 TADA2AO75478 443 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 GH1P01241 217 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 CYBBP04839 570 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 TCP1P17987 556 aaKnown RBP7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 RPS12P25398 132 aaKnown RBP7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 STX1BP61266 288 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 PSMC5P62195 406 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 EHHADHQ08426 723 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 SGO2Q562F6 1265 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 FAM117BQ6P1L5 589 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 BARGINQ6ZT62 677 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 ZNF467Q7Z7K2 595 aaPredicted RBP7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 RNF217Q8TC41 542 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 DDX50Q9BQ39 737 aaKnown RBP7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 FAM114A2Q9NRY5 505 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 POLR3EQ9NVU0 708 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 PIN4Q9Y237 131 aaKnown RBP7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 ZBTB12Q9Y330 459 aaPredicted RBP7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 ADCY10Q96PN6 1610 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 LRRD1A4D1F6 860 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 NDUFAB1O14561 156 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 CTSHP09668 335 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 PAMP19021 973 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 CDC42EP1Q00587 391 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 ZNF394Q53GI3 561 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 DDX53Q86TM3 631 aaKnown RBP7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 SMYD4Q8IYR2 804 aaPredicted RBP7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 LINC00116Q8NCU8 138 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 GPRC5AQ8NFJ5 357 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 DPF3Q92784 378 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 FAM20AQ96MK3 541 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 FAM213AQ9BRX8 229 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 DESI2Q9BSY9 194 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 MYOZ2Q9NPC6 264 aa7.45□□□□□ -1.22
GAPVD1-202ENST00000297933 GOLGA8QA0A0J9YX86 632 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 GOLGA8OA6NCC3 632 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 POC1B-GALNT4F8VUJ3 575 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 GOLGA8NF8WBI6 632 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 CA4P22748 312 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 TOGARAM2Q6ZUX3 1019 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 LDHDQ86WU2 507 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 FAM71BQ8TC56 605 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 DHX38Q92620 1227 aaKnown RBP7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 MAGOHBQ96A72 148 aaKnown RBP7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 HVCN1Q96D96 273 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 HAUS4Q9H6D7 363 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 NGRNQ9NPE2 291 aaKnown RBP7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 SCINQ9Y6U3 715 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 ZBED1O96006 694 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 ALDH1A1P00352 501 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 MAPK8IP2Q13387 824 aaPredicted RBP7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 GRM4Q14833 912 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 IER5Q5VY09 327 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 RNF180Q86T96 592 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 CDC26Q8NHZ8 85 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 ACAP3Q96P50 834 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 HACD3Q9P035 362 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 ITM2BQ9Y287 266 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 NEDD4P46934 1319 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 GTF2A2P52657 109 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 RAD51Q06609 339 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 C9orf131Q5VYM1 1079 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 ARL6IP4Q66PJ3 421 aaKnown RBP7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 TADA2BQ86TJ2 420 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 KIF12Q96FN5 646 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 ZNF560Q96MR9 790 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 ISCA1Q9BUE6 129 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 HOMER3Q9NSC5 361 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 PCDHB6Q9Y5E3 794 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 SRPRBQ9Y5M8 271 aaKnown RBP7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 EPN1Q9Y6I3 576 aaPredicted RBP7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 ARHGAP42A6NI28 874 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 APOEP02649 317 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 SLFN14P0C7P3 912 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 FBXW4P57775 412 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 SF3A3Q12874 501 aaKnown RBP eCLIP7.44□□□□□ -1.221e-7■■■■□ 19.8
GAPVD1-202ENST00000297933 PFKFB3Q16875 520 aaPredicted RBP7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 QRICH1Q2TAL8 776 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 DCAF4L1Q3SXM0 396 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 SPATA2LQ8IUW3 424 aaPredicted RBP7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 ANKRD13AQ8IZ07 590 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 UHMK1Q8TAS1 419 aaKnown RBP7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 CFAP36Q96G28 342 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 FAM84BQ96KN1 310 aaPredicted RBP7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 RWDD2AQ9UIY3 292 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 SPATA31E1Q6ZUB1 1445 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 NMT2O60551 498 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 ADORA2BP29275 332 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 GRIK1P39086 918 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 MAP3K21Q5TCX8 1036 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 PRAMEF18Q5VWM3 479 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 FRA10AC1Q70Z53 315 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 ANKRD13CQ8N6S4 541 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 LPAR1Q92633 364 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 CPVLQ9H3G5 476 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 THAP9Q9H5L6 903 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 LMBRD1Q9NUN5 540 aa7.44□□□□□ -1.22
GAPVD1-202ENST00000297933 SLC13A4Q9UKG4 626 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms