RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 NOL4O94818 638 aa14.98□□□□□ -0.01
CHMP4C-201ENST00000297265 HNRNPH3P31942 346 aaKnown RBP14.98□□□□□ -0.01
CHMP4C-201ENST00000297265 YWHABP31946 246 aaKnown RBP14.98□□□□□ -0.01
CHMP4C-201ENST00000297265 CASP4P49662 377 aa14.98□□□□□ -0.01
CHMP4C-201ENST00000297265 KRT76Q01546 638 aa14.98□□□□□ -0.01
CHMP4C-201ENST00000297265 SP2Q02086 613 aa14.98□□□□□ -0.01
CHMP4C-201ENST00000297265 CCDC40Q4G0X9 1142 aa14.98□□□□□ -0.01
CHMP4C-201ENST00000297265 DPY19L2P1Q6NXN4 242 aa14.98□□□□□ -0.01
CHMP4C-201ENST00000297265 RIOX2Q8IUF8 465 aa14.98□□□□□ -0.01
CHMP4C-201ENST00000297265 SMCR8Q8TEV9 937 aaPredicted RBP14.98□□□□□ -0.01
CHMP4C-201ENST00000297265 BORCS6Q96GS4 357 aa14.98□□□□□ -0.01
CHMP4C-201ENST00000297265 WDR24Q96S15 920 aa14.98□□□□□ -0.01
CHMP4C-201ENST00000297265 WDR64B1ANS9 1081 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 DYNC1I1O14576 645 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 ZNF862O60290 1169 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 SFNP31947 248 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 JAK3P52333 1124 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 PSMC5P62195 406 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 ODR4Q5SWX8 454 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 ZNF746Q6NUN9 644 aaPredicted RBP14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 GADL1Q6ZQY3 521 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 ANO5Q75V66 913 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 BAP1Q92560 729 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 MOV10L1Q9BXT6 1211 aaKnown RBP14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 ASCC2Q9H1I8 757 aaPredicted RBP14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 TAF1DQ9H5J8 278 aaPredicted RBP14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 L2HGDHQ9H9P8 463 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 FAM207AQ9NSI2 230 aaPredicted RBP14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 DNAI1Q9UI46 699 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 PLAGL2Q9UPG8 496 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 EPN1Q9Y6I3 576 aaPredicted RBP14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 PHLPP2Q6ZVD8 1323 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 GOLGA6L9A6NEM1 432 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 BACH1O14867 736 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 CLIC2O15247 247 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 CALUO43852 315 aaPredicted RBP14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 NDUFA10O95299 355 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 NR3C1P04150 777 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 ARHGAP25P42331 645 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 NFIL3Q16649 462 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 FRMD5Q7Z6J6 570 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 NLRX1Q86UT6 975 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 FAM178BQ8IXR5 827 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 DNERQ8NFT8 737 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 SPATC1LQ9H0A9 340 aa14.97□□□□□ -0.01
CHMP4C-201ENST00000297265 SCN4AP35499 1836 aa14.96□□□□□ -0.01
CHMP4C-201ENST00000297265 STAM2O75886 525 aa14.96□□□□□ -0.01
CHMP4C-201ENST00000297265 GJA5P36382 358 aa14.96□□□□□ -0.01
CHMP4C-201ENST00000297265 NPEPPSP55786 919 aa14.96□□□□□ -0.01
CHMP4C-201ENST00000297265 CDK17Q00537 523 aa14.96□□□□□ -0.01
CHMP4C-201ENST00000297265 KCNH2Q12809 1159 aa14.96□□□□□ -0.01
CHMP4C-201ENST00000297265 LDLRAD1Q5T700 205 aa14.96□□□□□ -0.01
CHMP4C-201ENST00000297265 UTP14CQ5TAP6 766 aaKnown RBP14.96□□□□□ -0.01
CHMP4C-201ENST00000297265 MAEAQ7L5Y9 396 aa14.96□□□□□ -0.01
CHMP4C-201ENST00000297265 RDM1Q8NG50 284 aa14.96□□□□□ -0.01
CHMP4C-201ENST00000297265 IQCDQ96DY2 449 aa14.96□□□□□ -0.01
CHMP4C-201ENST00000297265 IWS1Q96ST2 819 aa14.96□□□□□ -0.01
CHMP4C-201ENST00000297265 MMRN2Q9H8L6 949 aa14.96□□□□□ -0.01
CHMP4C-201ENST00000297265 TXNRD2Q9NNW7 524 aa14.96□□□□□ -0.01
CHMP4C-201ENST00000297265 DMAC2Q9NW81 257 aa14.96□□□□□ -0.01
CHMP4C-201ENST00000297265 PCDHA10Q9Y5I2 948 aa14.96□□□□□ -0.01
CHMP4C-201ENST00000297265 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.96□□□□□ -0.01
CHMP4C-201ENST00000297265 NFASCO94856 1347 aa14.96□□□□□ -0.01
CHMP4C-201ENST00000297265 SOWAHBA6NEL2 793 aa14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 HERVK_113P62684 666 aa14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 APBA1Q02410 837 aa14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 PPIL2Q13356 520 aa14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 Q3C1V9 767 aa14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 GPAT2Q6NUI2 795 aa14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 OPTNQ96CV9 577 aa14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 PCMTD1Q96MG8 357 aaPredicted RBP14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 ANKEF1Q9NU02 776 aa14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 RBPJLQ9UBG7 517 aa14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 FAM184BQ9ULE4 1060 aa14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 AGTPBP1Q9UPW5 1226 aa14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 PLEKP08567 350 aaPredicted RBP14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 POTEJP0CG39 1038 aa14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 EDNRBP24530 442 aa14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 ICAM3P32942 547 aa14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 PLA2G4FQ68DD2 849 aa14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 ABHD15Q6UXT9 468 aa14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 ANKRD35Q8N283 1001 aa14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 LZTFL1Q9NQ48 299 aa14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 GPRC5CQ9NQ84 441 aa14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 ARHGAP20Q9P2F6 1191 aa14.95□□□□□ -0.02
CHMP4C-201ENST00000297265 ZNF263O14978 683 aa14.94□□□□□ -0.02
CHMP4C-201ENST00000297265 USO1O60763 962 aaKnown RBP14.94□□□□□ -0.02
CHMP4C-201ENST00000297265 EIF3JO75822 258 aaKnown RBP14.94□□□□□ -0.02
CHMP4C-201ENST00000297265 MAPTP10636 758 aaKnown RBP14.94□□□□□ -0.02
CHMP4C-201ENST00000297265 NF2P35240 595 aa14.94□□□□□ -0.02
CHMP4C-201ENST00000297265 ALDH5A1P51649 535 aaPredicted RBP14.94□□□□□ -0.02
CHMP4C-201ENST00000297265 TRMT1LQ7Z2T5 733 aaKnown RBP14.94□□□□□ -0.02
CHMP4C-201ENST00000297265 CCDC60Q8IWA6 550 aaPredicted RBP14.94□□□□□ -0.02
CHMP4C-201ENST00000297265 SMAP1Q8IYB5 467 aaPredicted RBP14.94□□□□□ -0.02
CHMP4C-201ENST00000297265 FAM133AQ8N9E0 248 aa14.94□□□□□ -0.02
CHMP4C-201ENST00000297265 ZNF526Q8TF50 670 aaPredicted RBP14.94□□□□□ -0.02
CHMP4C-201ENST00000297265 SLC35C1Q96A29 364 aa14.94□□□□□ -0.02
CHMP4C-201ENST00000297265 CRACR2AQ9BSW2 395 aa14.94□□□□□ -0.02
CHMP4C-201ENST00000297265 NHEJ1Q9H9Q4 299 aaPredicted RBP14.94□□□□□ -0.02
CHMP4C-201ENST00000297265 PDLIM7Q9NR12 457 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms