RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 TACC1O75410 805 aa12.93□□□□□ -0.34
RHO-201ENST00000296271 UCHL3P15374 230 aa12.93□□□□□ -0.34
RHO-201ENST00000296271 KLHL30Q0D2K2 578 aa12.93□□□□□ -0.34
RHO-201ENST00000296271 IRF2BP2Q7Z5L9 587 aa12.93□□□□□ -0.34
RHO-201ENST00000296271 DAW1Q8N136 415 aa12.93□□□□□ -0.34
RHO-201ENST00000296271 PROCA1Q8NCQ7 364 aaPredicted RBP12.93□□□□□ -0.34
RHO-201ENST00000296271 CLEC4DQ8WXI8 215 aa12.93□□□□□ -0.34
RHO-201ENST00000296271 OSBPL9Q96SU4 736 aa12.93□□□□□ -0.34
RHO-201ENST00000296271 LRRC1Q9BTT6 524 aa12.93□□□□□ -0.34
RHO-201ENST00000296271 SIX2Q9NPC8 291 aa12.93□□□□□ -0.34
RHO-201ENST00000296271 DMGDHQ9UI17 866 aaKnown RBP12.93□□□□□ -0.34
RHO-201ENST00000296271 PDXKO00764 312 aa12.92□□□□□ -0.34
RHO-201ENST00000296271 PALMO75781 387 aa12.92□□□□□ -0.34
RHO-201ENST00000296271 AFPP02771 609 aaKnown RBP12.92□□□□□ -0.34
RHO-201ENST00000296271 SERPING1P05155 500 aa12.92□□□□□ -0.34
RHO-201ENST00000296271 EIF2AK2P19525 551 aaKnown RBP12.92□□□□□ -0.34
RHO-201ENST00000296271 HMGB2P26583 209 aaKnown RBP12.92□□□□□ -0.34
RHO-201ENST00000296271 PTGER2P43116 358 aa12.92□□□□□ -0.34
RHO-201ENST00000296271 ITGB3BPQ13352 177 aaPredicted RBP12.92□□□□□ -0.34
RHO-201ENST00000296271 PPP2R5CQ13362 524 aa12.92□□□□□ -0.34
RHO-201ENST00000296271 MAPK8IP2Q13387 824 aaPredicted RBP12.92□□□□□ -0.34
RHO-201ENST00000296271 TUBB2AQ13885 445 aa12.92□□□□□ -0.34
RHO-201ENST00000296271 EPHA7Q15375 998 aa12.92□□□□□ -0.34
RHO-201ENST00000296271 RIN2Q8WYP3 895 aaPredicted RBP12.92□□□□□ -0.34
RHO-201ENST00000296271 ELMO3Q96BJ8 720 aa12.92□□□□□ -0.34
RHO-201ENST00000296271 TEPSINQ96N21 525 aa12.92□□□□□ -0.34
RHO-201ENST00000296271 TUBB2BQ9BVA1 445 aa12.92□□□□□ -0.34
RHO-201ENST00000296271 KCNH7Q9NS40 1196 aa12.92□□□□□ -0.34
RHO-201ENST00000296271 MRPL11Q9Y3B7 192 aaKnown RBP12.92□□□□□ -0.34
RHO-201ENST00000296271 GNA14O95837 355 aa12.92□□□□□ -0.34
RHO-201ENST00000296271 XRCC5P13010 732 aaKnown RBP12.92□□□□□ -0.34
RHO-201ENST00000296271 MRPS9P82933 396 aaKnown RBP12.92□□□□□ -0.34
RHO-201ENST00000296271 CASP8Q14790 479 aa12.92□□□□□ -0.34
RHO-201ENST00000296271 EXOC3L4Q17RC7 722 aa12.92□□□□□ -0.34
RHO-201ENST00000296271 KIAA0753Q2KHM9 967 aa12.92□□□□□ -0.34
RHO-201ENST00000296271 TRIM58Q8NG06 486 aa12.92□□□□□ -0.34
RHO-201ENST00000296271 TAAR1Q96RJ0 339 aa12.92□□□□□ -0.34
RHO-201ENST00000296271 PCIF1Q9H4Z3 704 aa12.92□□□□□ -0.34
RHO-201ENST00000296271 TYW1Q9NV66 732 aaKnown RBP12.92□□□□□ -0.34
RHO-201ENST00000296271 JRKLQ9Y4A0 524 aa12.92□□□□□ -0.34
RHO-201ENST00000296271 ATP9AO75110 1047 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 ASIC2Q16515 512 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 UGCGQ16739 394 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 CBWD6Q4V339 395 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 CBWD3Q5JTY5 395 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 CBWD5Q5RIA9 395 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 ODR4Q5SWX8 454 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 UTP14CQ5TAP6 766 aaKnown RBP12.91□□□□□ -0.34
RHO-201ENST00000296271 DLK2Q6UY11 383 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 EHBP1Q8NDI1 1231 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 ZBED3Q96IU2 234 aaPredicted RBP12.91□□□□□ -0.34
RHO-201ENST00000296271 PKNOX2Q96KN3 472 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 GPRC5CQ9NQ84 441 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 GCNT4Q9P109 453 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 COL2A1P02458 1487 aaPredicted RBP12.91□□□□□ -0.34
RHO-201ENST00000296271 SSU72P8A0A1W2PR75 194 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 ZSCAN5CA6NGD5 496 aaPredicted RBP12.91□□□□□ -0.34
RHO-201ENST00000296271 PEX10O60683 326 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 HIP1RO75146 1068 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 MAPK7Q13164 816 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 MTMR2Q13614 643 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 FOXR2Q6PJQ5 311 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 FRMD5Q7Z6J6 570 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 HNRNPLLQ8WVV9 542 aaKnown RBP12.91□□□□□ -0.34
RHO-201ENST00000296271 BORCS6Q96GS4 357 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 SPAG5Q96R06 1193 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 MXRA8Q9BRK3 442 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 PARVGQ9HBI0 331 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 RIPK3Q9Y572 518 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 FER1L6Q2WGJ9 1857 aa12.91□□□□□ -0.34
RHO-201ENST00000296271 ANO9A1A5B4 782 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 DHX15O43143 795 aaKnown RBP12.9□□□□□ -0.34
RHO-201ENST00000296271 PJA2O43164 708 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 CALUO43852 315 aaPredicted RBP12.9□□□□□ -0.34
RHO-201ENST00000296271 MYCLP12524 364 aaPredicted RBP12.9□□□□□ -0.34
RHO-201ENST00000296271 SOX10P56693 466 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 DLG4P78352 724 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 SLC18A3Q16572 532 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 NBPF12Q5TAG4 269 aaPredicted RBP12.9□□□□□ -0.34
RHO-201ENST00000296271 IQCEQ6IPM2 695 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 B3GNT9Q6UX72 402 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 ZNF720Q7Z2F6 126 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 FAM178BQ8IXR5 827 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 FAM84AQ96KN4 292 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 TSGA10Q9BZW7 698 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 RBM12Q9NTZ6 932 aaKnown RBP12.9□□□□□ -0.34
RHO-201ENST00000296271 FEM1BQ9UK73 627 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 FAM184BQ9ULE4 1060 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 SAMM50Q9Y512 469 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 MYH11P35749 1972 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 TMCO5BA8MYB1 307 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 RBAK-RBAKDNI3L0D1 243 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 FLOT1O75955 427 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 GFPT2O94808 682 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 ASNSP08243 561 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 TNNT3P45378 269 aaPredicted RBP12.9□□□□□ -0.34
RHO-201ENST00000296271 BMT2Q1RMZ1 405 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 CIAPIN1Q6FI81 312 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 PPP4R3CPQ6ZMV5 832 aa12.9□□□□□ -0.34
RHO-201ENST00000296271 SPATA4Q8NEY3 305 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms