RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 SH3GLB2Q9NR46 395 aa28.6■■■□□ 2.17
U2AF1-201ENST00000291552 MSH4O15457 936 aa28.59■■■□□ 2.17
U2AF1-201ENST00000291552 MGEA5O60502 916 aa28.59■■■□□ 2.17
U2AF1-201ENST00000291552 BMPR1AP36894 532 aa28.59■■■□□ 2.17
U2AF1-201ENST00000291552 NPY5RQ15761 445 aa28.59■■■□□ 2.17
U2AF1-201ENST00000291552 TIGD5Q53EQ6 642 aa28.59■■■□□ 2.17
U2AF1-201ENST00000291552 TCEAL5Q5H9L2 206 aa28.59■■■□□ 2.17
U2AF1-201ENST00000291552 SMAP1Q8IYB5 467 aaPredicted RBP28.59■■■□□ 2.17
U2AF1-201ENST00000291552 AIFM3Q96NN9 605 aa28.59■■■□□ 2.17
U2AF1-201ENST00000291552 ERVK-5Q9HDB9 667 aa28.59■■■□□ 2.17
U2AF1-201ENST00000291552 NOC2LQ9Y3T9 749 aaKnown RBP28.59■■■□□ 2.17
U2AF1-201ENST00000291552 PCDHA10Q9Y5I2 948 aa28.59■■■□□ 2.17
U2AF1-201ENST00000291552 PLXNA4Q9HCM2 1894 aa28.58■■■□□ 2.17
U2AF1-201ENST00000291552 GRM6O15303 877 aa28.58■■■□□ 2.17
U2AF1-201ENST00000291552 BTG3Q14201 252 aaPredicted RBP28.58■■■□□ 2.17
U2AF1-201ENST00000291552 NPAS4Q8IUM7 802 aa28.58■■■□□ 2.17
U2AF1-201ENST00000291552 BANK1Q8NDB2 785 aa28.58■■■□□ 2.17
U2AF1-201ENST00000291552 BBXQ8WY36 941 aaPredicted RBP28.58■■■□□ 2.17
U2AF1-201ENST00000291552 ZNF274Q96GC6 653 aaPredicted RBP28.58■■■□□ 2.17
U2AF1-201ENST00000291552 GABBR1Q9UBS5 961 aa28.58■■■□□ 2.17
U2AF1-201ENST00000291552 MRPL42Q9Y6G3 142 aaKnown RBP28.58■■■□□ 2.17
U2AF1-201ENST00000291552 ZNF862O60290 1169 aa28.57■■■□□ 2.16
U2AF1-201ENST00000291552 PSAPP07602 524 aa28.57■■■□□ 2.16
U2AF1-201ENST00000291552 KCNA5P22460 613 aa28.57■■■□□ 2.16
U2AF1-201ENST00000291552 GATMP50440 423 aa28.57■■■□□ 2.16
U2AF1-201ENST00000291552 NLRP5P59047 1200 aa28.57■■■□□ 2.16
U2AF1-201ENST00000291552 COL19A1Q14993 1142 aa28.57■■■□□ 2.16
U2AF1-201ENST00000291552 CKAP2LQ8IYA6 745 aa28.57■■■□□ 2.16
U2AF1-201ENST00000291552 GJA10Q969M2 543 aa28.57■■■□□ 2.16
U2AF1-201ENST00000291552 GINS2Q9Y248 185 aa28.57■■■□□ 2.16
U2AF1-201ENST00000291552 M0R2N6 131 aa28.56■■■□□ 2.16
U2AF1-201ENST00000291552 RB1P06400 928 aa28.56■■■□□ 2.16
U2AF1-201ENST00000291552 SSRP1Q08945 709 aaKnown RBP28.56■■■□□ 2.16
U2AF1-201ENST00000291552 STK3Q13188 491 aa28.56■■■□□ 2.16
U2AF1-201ENST00000291552 UGCGQ16739 394 aa28.56■■■□□ 2.16
U2AF1-201ENST00000291552 LEXMQ3ZCV2 418 aa28.56■■■□□ 2.16
U2AF1-201ENST00000291552 TRMT1LQ7Z2T5 733 aaKnown RBP28.56■■■□□ 2.16
U2AF1-201ENST00000291552 TRIM22Q8IYM9 498 aa28.56■■■□□ 2.16
U2AF1-201ENST00000291552 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.56■■■□□ 2.16
U2AF1-201ENST00000291552 TBCKQ8TEA7 893 aa28.56■■■□□ 2.16
U2AF1-201ENST00000291552 SLC5A5Q92911 643 aa28.56■■■□□ 2.16
U2AF1-201ENST00000291552 PPP1R16BQ96T49 567 aa28.56■■■□□ 2.16
U2AF1-201ENST00000291552 PCDHA4Q9UN74 947 aa28.56■■■□□ 2.16
U2AF1-201ENST00000291552 USP11P51784 963 aa28.55■■■□□ 2.16
U2AF1-201ENST00000291552 CMTR2Q8IYT2 770 aaKnown RBP28.55■■■□□ 2.16
U2AF1-201ENST00000291552 LINC01465Q8N7H1 131 aa28.55■■■□□ 2.16
U2AF1-201ENST00000291552 C11orf84Q9BUA3 381 aaPredicted RBP28.55■■■□□ 2.16
U2AF1-201ENST00000291552 NSUN3Q9H649 340 aaKnown RBP28.55■■■□□ 2.16
U2AF1-201ENST00000291552 RWDD3Q9Y3V2 267 aa28.55■■■□□ 2.16
U2AF1-201ENST00000291552 WDR64B1ANS9 1081 aa28.54■■■□□ 2.16
U2AF1-201ENST00000291552 DEXIO95424 95 aa28.54■■■□□ 2.16
U2AF1-201ENST00000291552 VTNP04004 478 aa28.54■■■□□ 2.16
U2AF1-201ENST00000291552 NFX1Q12986 1120 aaKnown RBP28.54■■■□□ 2.16
U2AF1-201ENST00000291552 KIZQ2M2Z5 673 aa28.54■■■□□ 2.16
U2AF1-201ENST00000291552 DAGLBQ8NCG7 672 aa28.54■■■□□ 2.16
U2AF1-201ENST00000291552 UNC45AQ9H3U1 944 aa28.54■■■□□ 2.16
U2AF1-201ENST00000291552 DISC1Q9NRI5 854 aa28.54■■■□□ 2.16
U2AF1-201ENST00000291552 GPR32O75388 356 aa28.53■■■□□ 2.16
U2AF1-201ENST00000291552 RPS6KA5O75582 802 aa28.53■■■□□ 2.16
U2AF1-201ENST00000291552 TDP2O95551 362 aa28.53■■■□□ 2.16
U2AF1-201ENST00000291552 CLCN3P51790 818 aa28.53■■■□□ 2.16
U2AF1-201ENST00000291552 CAMK1Q14012 370 aa28.53■■■□□ 2.16
U2AF1-201ENST00000291552 PAN2Q504Q3 1202 aaKnown RBP28.53■■■□□ 2.16
U2AF1-201ENST00000291552 FAM228AQ86W67 206 aa28.53■■■□□ 2.16
U2AF1-201ENST00000291552 NEK9Q8TD19 979 aa28.53■■■□□ 2.16
U2AF1-201ENST00000291552 RIT2Q99578 217 aa28.53■■■□□ 2.16
U2AF1-201ENST00000291552 OSMRQ99650 979 aa28.53■■■□□ 2.16
U2AF1-201ENST00000291552 CD320Q9NPF0 282 aa28.53■■■□□ 2.16
U2AF1-201ENST00000291552 PDRG1Q9NUG6 133 aa28.53■■■□□ 2.16
U2AF1-201ENST00000291552 TCEAL9Q9UHQ7 104 aa28.53■■■□□ 2.16
U2AF1-201ENST00000291552 SAMM50Q9Y512 469 aa28.53■■■□□ 2.16
U2AF1-201ENST00000291552 CPLX1O14810 134 aa28.52■■■□□ 2.16
U2AF1-201ENST00000291552 SARSP49591 514 aaKnown RBP28.52■■■□□ 2.16
U2AF1-201ENST00000291552 PRKCEQ02156 737 aa28.52■■■□□ 2.16
U2AF1-201ENST00000291552 Q4G0T1 1027 aa28.52■■■□□ 2.16
U2AF1-201ENST00000291552 BLIDQ8IZY5 108 aa28.52■■■□□ 2.16
U2AF1-201ENST00000291552 KHSRPQ92945 711 aaKnown RBP eCLIP28.52■■■□□ 2.16
U2AF1-201ENST00000291552 FAM167AQ96KS9 214 aa28.52■■■□□ 2.16
U2AF1-201ENST00000291552 LMAN2LQ9H0V9 348 aa28.52■■■□□ 2.16
U2AF1-201ENST00000291552 ST3GAL5Q9UNP4 418 aa28.52■■■□□ 2.16
U2AF1-201ENST00000291552 H3BQ06 376 aaPredicted RBP28.51■■■□□ 2.15
U2AF1-201ENST00000291552 CHMP2AO43633 222 aa28.51■■■□□ 2.15
U2AF1-201ENST00000291552 GAS7O60861 476 aa28.51■■■□□ 2.15
U2AF1-201ENST00000291552 PSMD10O75832 226 aa28.51■■■□□ 2.15
U2AF1-201ENST00000291552 OATP04181 439 aa28.51■■■□□ 2.15
U2AF1-201ENST00000291552 STAG3L1P0CL83 205 aa28.51■■■□□ 2.15
U2AF1-201ENST00000291552 LRCH2Q5VUJ6 765 aa28.51■■■□□ 2.15
U2AF1-201ENST00000291552 B3GNT9Q6UX72 402 aa28.51■■■□□ 2.15
U2AF1-201ENST00000291552 METTL13Q8N6R0 699 aa28.51■■■□□ 2.15
U2AF1-201ENST00000291552 PABPC5Q96DU9 382 aaKnown RBP28.51■■■□□ 2.15
U2AF1-201ENST00000291552 MBOAT7Q96N66 472 aa28.51■■■□□ 2.15
U2AF1-201ENST00000291552 PLVAPQ9BX97 442 aa28.51■■■□□ 2.15
U2AF1-201ENST00000291552 TEKT3Q9BXF9 490 aa28.51■■■□□ 2.15
U2AF1-201ENST00000291552 CYP3A7-CYP3A51PA0A087WV96 503 aa28.5■■■□□ 2.15
U2AF1-201ENST00000291552 DTNBO60941 627 aa28.5■■■□□ 2.15
U2AF1-201ENST00000291552 MMP1P03956 469 aa28.5■■■□□ 2.15
U2AF1-201ENST00000291552 NEFLP07196 543 aa28.5■■■□□ 2.15
U2AF1-201ENST00000291552 IL9P15248 144 aa28.5■■■□□ 2.15
U2AF1-201ENST00000291552 IBSPP21815 317 aaPredicted RBP28.5■■■□□ 2.15
U2AF1-201ENST00000291552 CYP3A7P24462 503 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms