RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 SSTR3P32745 418 aaPredicted RBP17.3■□□□□ 0.36
SMAD6-201ENST00000288840 GTF2A1P52655 376 aaPredicted RBP17.3■□□□□ 0.36
SMAD6-201ENST00000288840 COG2Q14746 738 aa17.3■□□□□ 0.36
SMAD6-201ENST00000288840 XKR9Q5GH70 373 aa17.3■□□□□ 0.36
SMAD6-201ENST00000288840 KLHDC7AQ5VTJ3 777 aa17.3■□□□□ 0.36
SMAD6-201ENST00000288840 EMBQ6PCB8 327 aa17.3■□□□□ 0.36
SMAD6-201ENST00000288840 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.3■□□□□ 0.36
SMAD6-201ENST00000288840 TMEM179Q6ZVK1 233 aa17.3■□□□□ 0.36
SMAD6-201ENST00000288840 SP8Q8IXZ3 490 aa17.3■□□□□ 0.36
SMAD6-201ENST00000288840 TAB3Q8N5C8 712 aaPredicted RBP17.3■□□□□ 0.36
SMAD6-201ENST00000288840 TSEN2Q8NCE0 465 aaKnown RBP17.3■□□□□ 0.36
SMAD6-201ENST00000288840 SART1O43290 800 aaKnown RBP17.29■□□□□ 0.36
SMAD6-201ENST00000288840 NEFHP12036 1026 aa17.29■□□□□ 0.36
SMAD6-201ENST00000288840 TRIP13Q15645 432 aaPredicted RBP17.29■□□□□ 0.36
SMAD6-201ENST00000288840 CCDC121Q6ZUS5 278 aa17.29■□□□□ 0.36
SMAD6-201ENST00000288840 MICALCLQ6ZW33 695 aa17.29■□□□□ 0.36
SMAD6-201ENST00000288840 PHRF1Q9P1Y6 1649 aaKnown RBP17.29■□□□□ 0.36
SMAD6-201ENST00000288840 CAPN12Q6ZSI9 719 aa17.29■□□□□ 0.36
SMAD6-201ENST00000288840 CABS1Q96KC9 395 aa17.29■□□□□ 0.36
SMAD6-201ENST00000288840 ADAMTSL3P82987 1691 aa17.29■□□□□ 0.36
SMAD6-201ENST00000288840 ESYT2A0FGR8 921 aa17.29■□□□□ 0.36
SMAD6-201ENST00000288840 NPR1P16066 1061 aa17.29■□□□□ 0.36
SMAD6-201ENST00000288840 MAP2K1Q02750 393 aaPredicted RBP17.29■□□□□ 0.36
SMAD6-201ENST00000288840 DPH6Q7L8W6 267 aa17.29■□□□□ 0.36
SMAD6-201ENST00000288840 MAGOHBQ96A72 148 aaKnown RBP17.29■□□□□ 0.36
SMAD6-201ENST00000288840 TRIM51Q9BSJ1 452 aa17.29■□□□□ 0.36
SMAD6-201ENST00000288840 ASIC3Q9UHC3 531 aa17.29■□□□□ 0.36
SMAD6-201ENST00000288840 FEZ2Q9UHY8 353 aaPredicted RBP17.29■□□□□ 0.36
SMAD6-201ENST00000288840 A0A1W2PQJ5 194 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 FAM86B1E9PN63 330 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 FAM86B2P0C5J1 330 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 IRAK1P51617 712 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 PPP4R3AQ6IN85 833 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 LRRC55Q6ZSA7 311 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 LARSQ9P2J5 1176 aaKnown RBP17.28■□□□□ 0.36
SMAD6-201ENST00000288840 SPEF2Q9C093 1822 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 NID2Q14112 1375 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 TAF1P21675 1872 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 AKAP11Q9UKA4 1901 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 TARSL2A2RTX5 802 aaKnown RBP17.28■□□□□ 0.36
SMAD6-201ENST00000288840 RASSF10A6NK89 507 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 TTI1O43156 1089 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 PLCB3Q01970 1234 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 CC2D2BQ6DHV5 1058 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 ZNF571Q7Z3V5 609 aaPredicted RBP17.28■□□□□ 0.36
SMAD6-201ENST00000288840 ARFGAP2Q8N6H7 521 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 PPM1EQ8WY54 764 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 NOC2LQ9Y3T9 749 aaKnown RBP17.28■□□□□ 0.36
SMAD6-201ENST00000288840 MSH4O15457 936 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 BCRP11274 1271 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 GRIPAP1Q4V328 841 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 SEL1L2Q5TEA6 688 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 KRT27Q7Z3Y8 459 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 CHURC1Q8WUH1 139 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 OSGEPQ9NPF4 335 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 FAM169AQ9Y6X4 670 aa17.28■□□□□ 0.36
SMAD6-201ENST00000288840 PARP4Q9UKK3 1724 aaKnown RBP17.28■□□□□ 0.36
SMAD6-201ENST00000288840 MYH8P13535 1937 aa17.27■□□□□ 0.36
SMAD6-201ENST00000288840 EVI5O60447 810 aa17.27■□□□□ 0.36
SMAD6-201ENST00000288840 GALCP54803 685 aa17.27■□□□□ 0.36
SMAD6-201ENST00000288840 PEX3P56589 373 aa17.27■□□□□ 0.36
SMAD6-201ENST00000288840 GSTA5Q7RTV2 222 aa17.27■□□□□ 0.36
SMAD6-201ENST00000288840 SYCE1Q8N0S2 351 aa17.27■□□□□ 0.36
SMAD6-201ENST00000288840 RNF10Q8N5U6 811 aaKnown RBP17.27■□□□□ 0.36
SMAD6-201ENST00000288840 DNAJC19Q96DA6 116 aa17.27■□□□□ 0.36
SMAD6-201ENST00000288840 SCLT1Q96NL6 688 aa17.27■□□□□ 0.36
SMAD6-201ENST00000288840 TEKT3Q9BXF9 490 aa17.27■□□□□ 0.36
SMAD6-201ENST00000288840 PRR12Q9ULL5 1215 aa17.27■□□□□ 0.36
SMAD6-201ENST00000288840 N4BP2Q86UW6 1770 aaPredicted RBP17.27■□□□□ 0.36
SMAD6-201ENST00000288840 SSU72P8A0A1W2PR75 194 aa17.27■□□□□ 0.36
SMAD6-201ENST00000288840 ATMINO43313 823 aaPredicted RBP17.27■□□□□ 0.36
SMAD6-201ENST00000288840 KIF4AO95239 1232 aa17.27■□□□□ 0.36
SMAD6-201ENST00000288840 SYF2O95926 243 aaKnown RBP17.27■□□□□ 0.36
SMAD6-201ENST00000288840 IL1R1P14778 569 aa17.27■□□□□ 0.36
SMAD6-201ENST00000288840 USP11P51784 963 aa17.27■□□□□ 0.36
SMAD6-201ENST00000288840 TAOK3Q9H2K8 898 aa17.27■□□□□ 0.36
SMAD6-201ENST00000288840 RASAL2Q9UJF2 1139 aa17.27■□□□□ 0.35
SMAD6-201ENST00000288840 GJA3Q9Y6H8 435 aa17.27■□□□□ 0.35
SMAD6-201ENST00000288840 ITGA4P13612 1032 aa17.26■□□□□ 0.35
SMAD6-201ENST00000288840 FERP16591 822 aa17.26■□□□□ 0.35
SMAD6-201ENST00000288840 GIT2Q14161 759 aa17.26■□□□□ 0.35
SMAD6-201ENST00000288840 ANKRD42Q8N9B4 389 aa17.26■□□□□ 0.35
SMAD6-201ENST00000288840 SAAL1Q96ER3 474 aa17.26■□□□□ 0.35
SMAD6-201ENST00000288840 TYW1Q9NV66 732 aaKnown RBP17.26■□□□□ 0.35
SMAD6-201ENST00000288840 NAB2Q15742 525 aa17.26■□□□□ 0.35
SMAD6-201ENST00000288840 PRMT6Q96LA8 375 aaPredicted RBP17.26■□□□□ 0.35
SMAD6-201ENST00000288840 TRPC5Q9UL62 973 aaPredicted RBP17.26■□□□□ 0.35
SMAD6-201ENST00000288840 EML1O00423 815 aa17.26■□□□□ 0.35
SMAD6-201ENST00000288840 TMOD1P28289 359 aa17.26■□□□□ 0.35
SMAD6-201ENST00000288840 CALCOCO2Q13137 446 aa17.26■□□□□ 0.35
SMAD6-201ENST00000288840 CASKIN2Q8WXE0 1202 aa17.26■□□□□ 0.35
SMAD6-201ENST00000288840 BAP1Q92560 729 aa17.26■□□□□ 0.35
SMAD6-201ENST00000288840 FBXL5Q9UKA1 691 aa17.26■□□□□ 0.35
SMAD6-201ENST00000288840 BZW2Q9Y6E2 419 aaKnown RBP17.26■□□□□ 0.35
SMAD6-201ENST00000288840 SIPA1L3O60292 1781 aaPredicted RBP17.26■□□□□ 0.35
SMAD6-201ENST00000288840 MYH13Q9UKX3 1938 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 M0R2N6 131 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 PON1P27169 355 aa17.25■□□□□ 0.35
SMAD6-201ENST00000288840 APOBEC3HQ6NTF7 200 aaKnown RBP17.25■□□□□ 0.35
SMAD6-201ENST00000288840 OTUD6AQ7L8S5 288 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms