RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 BBXQ8WY36 941 aaPredicted RBP24.31■■□□□ 1.48
PDLIM3-203ENST00000284771 CLSTN2Q9H4D0 955 aa24.31■■□□□ 1.48
PDLIM3-203ENST00000284771 SEPT9Q9UHD8 586 aaPredicted RBP24.31■■□□□ 1.48
PDLIM3-203ENST00000284771 MYMKA6NI61 221 aa24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 SSBP05455 408 aaKnown RBP eCLIP24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 TARBP2Q15633 366 aaKnown RBP24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 XKR9Q5GH70 373 aa24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 RINT1Q6NUQ1 792 aa24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 RNF180Q86T96 592 aa24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 TNMDQ9H2S6 317 aa24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 CYP26B1Q9NR63 512 aa24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 NRBP2Q9NSY0 501 aa24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 CYP11B2P19099 503 aa24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 PNOCQ13519 176 aa24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 CUL4BQ13620 913 aa24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 KIAA0753Q2KHM9 967 aa24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 C1orf186Q6ZWK4 172 aa24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 OTUD6AQ7L8S5 288 aa24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 ELOA2Q8IYF1 753 aaPredicted RBP24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 CEP170P1Q96L14 293 aa24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 RUSC1Q9BVN2 902 aa24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 BLZF1Q9H2G9 400 aa24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 ZNF215Q9UL58 517 aaPredicted RBP24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 SCN10AQ9Y5Y9 1956 aa24.3■■□□□ 1.48
PDLIM3-203ENST00000284771 ARID2Q68CP9 1835 aa24.29■■□□□ 1.48
PDLIM3-203ENST00000284771 NUP62CLQ9H1M0 184 aa24.29■■□□□ 1.48
PDLIM3-203ENST00000284771 MAGEF1Q9HAY2 307 aa24.29■■□□□ 1.48
PDLIM3-203ENST00000284771 POLD4Q9HCU8 107 aa24.29■■□□□ 1.48
PDLIM3-203ENST00000284771 OGDHLQ9ULD0 1010 aa24.29■■□□□ 1.48
PDLIM3-203ENST00000284771 TRPC6Q9Y210 931 aa24.29■■□□□ 1.48
PDLIM3-203ENST00000284771 KIAA0100Q14667 2235 aaKnown RBP24.29■■□□□ 1.48
PDLIM3-203ENST00000284771 LOXHD1Q8IVV2 1947 aa24.29■■□□□ 1.48
PDLIM3-203ENST00000284771 NPHP3-ACAD11A0A0J9YXS1 232 aa24.28■■□□□ 1.48
PDLIM3-203ENST00000284771 KPNA6O60684 536 aa24.28■■□□□ 1.48
PDLIM3-203ENST00000284771 INSRRP14616 1297 aa24.28■■□□□ 1.48
PDLIM3-203ENST00000284771 MFSD10Q14728 455 aa24.28■■□□□ 1.48
PDLIM3-203ENST00000284771 MTERF2Q49AM1 385 aa24.28■■□□□ 1.48
PDLIM3-203ENST00000284771 KANK3Q6NY19 840 aa24.28■■□□□ 1.48
PDLIM3-203ENST00000284771 PADI6Q6TGC4 694 aa24.28■■□□□ 1.48
PDLIM3-203ENST00000284771 PCSK9Q8NBP7 692 aaKnown RBP24.28■■□□□ 1.48
PDLIM3-203ENST00000284771 TRAPPC12Q8WVT3 735 aa24.28■■□□□ 1.48
PDLIM3-203ENST00000284771 FAM167AQ96KS9 214 aa24.28■■□□□ 1.48
PDLIM3-203ENST00000284771 TRIM9Q9C026 710 aa24.28■■□□□ 1.48
PDLIM3-203ENST00000284771 ZEB2O60315 1214 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 HBP1O60381 514 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 PSEN2P49810 448 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 ACLYP53396 1101 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 RAD51AP2Q09MP3 1159 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 POSTNQ15063 836 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 GPBP1Q86WP2 473 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 DDX12PQ92771 950 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 MTG1Q9BT17 334 aaPredicted RBP24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 CRISPLD2Q9H0B8 497 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 PDLIM7Q9NR12 457 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 ARHGEF35A5YM69 484 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 SGPL1O95470 568 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 GJB1P08034 283 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 CHMP4BP1P59074 171 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 DPYDQ12882 1025 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 HIC1Q14526 733 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 DYMQ7RTS9 669 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 ARRDC4Q8NCT1 418 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 U2AF1L4Q8WU68 220 aaKnown RBP24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 DNAJC19Q96DA6 116 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 ZBTB10Q96DT7 871 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 C7orf25Q9BPX7 421 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 BMP2KQ9NSY1 1161 aaPredicted RBP24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 GRIN2DO15399 1336 aa24.27■■□□□ 1.48
PDLIM3-203ENST00000284771 CACNB1Q02641 598 aaPredicted RBP24.26■■□□□ 1.47
PDLIM3-203ENST00000284771 CCDC183Q5T5S1 534 aa24.26■■□□□ 1.47
PDLIM3-203ENST00000284771 TSEN34Q9BSV6 310 aaKnown RBP24.26■■□□□ 1.47
PDLIM3-203ENST00000284771 KAT6AQ92794 2004 aa24.26■■□□□ 1.47
PDLIM3-203ENST00000284771 GTPBP6O43824 516 aaPredicted RBP24.25■■□□□ 1.47
PDLIM3-203ENST00000284771 USO1O60763 962 aaKnown RBP24.25■■□□□ 1.47
PDLIM3-203ENST00000284771 MNX1P50219 401 aaPredicted RBP24.25■■□□□ 1.47
PDLIM3-203ENST00000284771 GIT2Q14161 759 aa24.25■■□□□ 1.47
PDLIM3-203ENST00000284771 MARCH8Q5T0T0 291 aa24.25■■□□□ 1.47
PDLIM3-203ENST00000284771 DHX33Q9H6R0 707 aaKnown RBP24.25■■□□□ 1.47
PDLIM3-203ENST00000284771 XPNPEP1Q9NQW7 623 aa24.25■■□□□ 1.47
PDLIM3-203ENST00000284771 SETD4Q9NVD3 440 aa24.25■■□□□ 1.47
PDLIM3-203ENST00000284771 PCDHA5Q9Y5H7 936 aa24.25■■□□□ 1.47
PDLIM3-203ENST00000284771 SMIM10L2AP0DMW4 78 aa24.24■■□□□ 1.47
PDLIM3-203ENST00000284771 SMIM10L2BP0DMW5 78 aa24.24■■□□□ 1.47
PDLIM3-203ENST00000284771 AMPD3Q01432 767 aa24.24■■□□□ 1.47
PDLIM3-203ENST00000284771 NBPF20Q3BBV1 942 aa24.24■■□□□ 1.47
PDLIM3-203ENST00000284771 CNNM4Q6P4Q7 775 aa24.24■■□□□ 1.47
PDLIM3-203ENST00000284771 RBM43Q6ZSC3 357 aaKnown RBP24.24■■□□□ 1.47
PDLIM3-203ENST00000284771 SPATA20Q8TB22 786 aa24.24■■□□□ 1.47
PDLIM3-203ENST00000284771 KATNAL1Q9BW62 490 aa24.24■■□□□ 1.47
PDLIM3-203ENST00000284771 MKI67P46013 3256 aaKnown RBP24.24■■□□□ 1.47
PDLIM3-203ENST00000284771 MOXD2PA6NHM9 499 aa24.24■■□□□ 1.47
PDLIM3-203ENST00000284771 SOX10P56693 466 aa24.24■■□□□ 1.47
PDLIM3-203ENST00000284771 IGBP1P78318 339 aa24.24■■□□□ 1.47
PDLIM3-203ENST00000284771 MAEAQ7L5Y9 396 aa24.24■■□□□ 1.47
PDLIM3-203ENST00000284771 REEP2Q9BRK0 252 aa24.24■■□□□ 1.47
PDLIM3-203ENST00000284771 HDAC6Q9UBN7 1215 aa24.24■■□□□ 1.47
PDLIM3-203ENST00000284771 TRIP12Q14669 1992 aaPredicted RBP24.24■■□□□ 1.47
PDLIM3-203ENST00000284771 RSPH10B2B2RC85 870 aa24.23■■□□□ 1.47
PDLIM3-203ENST00000284771 DNM1LO00429 736 aa24.23■■□□□ 1.47
PDLIM3-203ENST00000284771 KLRC4O43908 158 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms