RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 NLRP12P59046 1061 aa21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 MORC3Q14149 939 aa21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 KCNB1Q14721 858 aa21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 PLA2G4FQ68DD2 849 aa21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 ISM2Q6H9L7 571 aa21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 PADI6Q6TGC4 694 aa21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 C11orf57Q6ZUT1 292 aaPredicted RBP21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 FAM200AQ8TCP9 573 aa21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 NIFKQ9BYG3 293 aaKnown RBP21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 SEPT9Q9UHD8 586 aaPredicted RBP21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 WDR81Q562E7 1941 aa21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 NPHP3-ACAD11A0A0J9YXS1 232 aa21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 KRT18P05783 430 aaKnown RBP21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 GRK4P32298 578 aa21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 NPEPPSP55786 919 aa21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 GIT2Q14161 759 aa21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 DPCR1Q3MIW9 517 aa21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 KMT5BQ4FZB7 885 aa21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 UNC13DQ70J99 1090 aa21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 FAM167AQ96KS9 214 aa21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 CEP170P1Q96L14 293 aa21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 ERAP1Q9NZ08 941 aa21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 PTCH2Q9Y6C5 1203 aa21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 RHOBTB3O94955 611 aa21.01■□□□□ 0.95
PDLIM3-202ENST00000284770 BMP6P22004 513 aa21.01■□□□□ 0.95
PDLIM3-202ENST00000284770 CCND3P30281 292 aaPredicted RBP21.01■□□□□ 0.95
PDLIM3-202ENST00000284770 CPT1AP50416 773 aa21.01■□□□□ 0.95
PDLIM3-202ENST00000284770 RAD51AP2Q09MP3 1159 aa21.01■□□□□ 0.95
PDLIM3-202ENST00000284770 BBXQ8WY36 941 aaPredicted RBP21.01■□□□□ 0.95
PDLIM3-202ENST00000284770 CCDC47Q96A33 483 aaKnown RBP21.01■□□□□ 0.95
PDLIM3-202ENST00000284770 SH2D3AQ9BRG2 576 aa21.01■□□□□ 0.95
PDLIM3-202ENST00000284770 REEP2Q9BRK0 252 aa21.01■□□□□ 0.95
PDLIM3-202ENST00000284770 C16orf70Q9BSU1 422 aa21.01■□□□□ 0.95
PDLIM3-202ENST00000284770 CYP26B1Q9NR63 512 aa21.01■□□□□ 0.95
PDLIM3-202ENST00000284770 LOXHD1Q8IVV2 1947 aa21.01■□□□□ 0.95
PDLIM3-202ENST00000284770 IDEP14735 1019 aa21■□□□□ 0.95
PDLIM3-202ENST00000284770 GUCY2CP25092 1073 aa21■□□□□ 0.95
PDLIM3-202ENST00000284770 BRDTQ58F21 947 aaPredicted RBP21■□□□□ 0.95
PDLIM3-202ENST00000284770 ATP8B4Q8TF62 1192 aa21■□□□□ 0.95
PDLIM3-202ENST00000284770 PTPN22Q9Y2R2 807 aa21■□□□□ 0.95
PDLIM3-202ENST00000284770 MYH9P35579 1960 aaKnown RBP21■□□□□ 0.95
PDLIM3-202ENST00000284770 FRMD3A2A2Y4 597 aa21■□□□□ 0.95
PDLIM3-202ENST00000284770 INHAP05111 366 aa21■□□□□ 0.95
PDLIM3-202ENST00000284770 RARBP10826 455 aa21■□□□□ 0.95
PDLIM3-202ENST00000284770 MARK3P27448 753 aa21■□□□□ 0.95
PDLIM3-202ENST00000284770 ZNF165P49910 485 aa21■□□□□ 0.95
PDLIM3-202ENST00000284770 GJA9P57773 515 aa21■□□□□ 0.95
PDLIM3-202ENST00000284770 PLCB4Q15147 1175 aa21■□□□□ 0.95
PDLIM3-202ENST00000284770 CBX8Q9HC52 389 aa21■□□□□ 0.95
PDLIM3-202ENST00000284770 EXOC1Q9NV70 894 aa21■□□□□ 0.95
PDLIM3-202ENST00000284770 PANK4Q9NVE7 773 aa21■□□□□ 0.95
PDLIM3-202ENST00000284770 ZNF286BP0CG31 522 aa20.99■□□□□ 0.95
PDLIM3-202ENST00000284770 CACNB1Q02641 598 aaPredicted RBP20.99■□□□□ 0.95
PDLIM3-202ENST00000284770 CCDC65Q8IXS2 484 aa20.99■□□□□ 0.95
PDLIM3-202ENST00000284770 ZNF215Q9UL58 517 aaPredicted RBP20.99■□□□□ 0.95
PDLIM3-202ENST00000284770 ODF2LQ9ULJ1 636 aa20.99■□□□□ 0.95
PDLIM3-202ENST00000284770 H3BRB1 525 aa20.98■□□□□ 0.95
PDLIM3-202ENST00000284770 USO1O60763 962 aaKnown RBP20.98■□□□□ 0.95
PDLIM3-202ENST00000284770 NKX3-2P78367 333 aa20.98■□□□□ 0.95
PDLIM3-202ENST00000284770 EHHADHQ08426 723 aa20.98■□□□□ 0.95
PDLIM3-202ENST00000284770 TARBP2Q15633 366 aaKnown RBP20.98■□□□□ 0.95
PDLIM3-202ENST00000284770 FSCN1Q16658 493 aaKnown RBP20.98■□□□□ 0.95
PDLIM3-202ENST00000284770 UVSSAQ2YD98 709 aa20.98■□□□□ 0.95
PDLIM3-202ENST00000284770 MTERF2Q49AM1 385 aa20.98■□□□□ 0.95
PDLIM3-202ENST00000284770 ZNF658Q5TYW1 1059 aaPredicted RBP20.98■□□□□ 0.95
PDLIM3-202ENST00000284770 TIPINQ9BVW5 301 aa20.98■□□□□ 0.95
PDLIM3-202ENST00000284770 UPF3AQ9H1J1 476 aaKnown RBP20.98■□□□□ 0.95
PDLIM3-202ENST00000284770 RNPEPQ9H4A4 650 aa20.98■□□□□ 0.95
PDLIM3-202ENST00000284770 TUT1Q9H6E5 874 aaKnown RBP20.98■□□□□ 0.95
PDLIM3-202ENST00000284770 SPC25Q9HBM1 224 aa20.98■□□□□ 0.95
PDLIM3-202ENST00000284770 PPME1Q9Y570 386 aa20.98■□□□□ 0.95
PDLIM3-202ENST00000284770 HBP1O60381 514 aa20.97■□□□□ 0.95
PDLIM3-202ENST00000284770 DGAT1O75907 488 aa20.97■□□□□ 0.95
PDLIM3-202ENST00000284770 IRX5P78411 483 aaPredicted RBP20.97■□□□□ 0.95
PDLIM3-202ENST00000284770 COASYQ13057 564 aa20.97■□□□□ 0.95
PDLIM3-202ENST00000284770 IQCB1Q15051 598 aa20.97■□□□□ 0.95
PDLIM3-202ENST00000284770 MLKLQ8NB16 471 aa20.97■□□□□ 0.95
PDLIM3-202ENST00000284770 CEP89Q96ST8 783 aa20.97■□□□□ 0.95
PDLIM3-202ENST00000284770 GTPBP4Q9BZE4 634 aaKnown RBP20.97■□□□□ 0.95
PDLIM3-202ENST00000284770 SYNRGQ9UMZ2 1314 aa20.97■□□□□ 0.95
PDLIM3-202ENST00000284770 TBCAO75347 108 aaKnown RBP20.97■□□□□ 0.95
PDLIM3-202ENST00000284770 C6orf222P0C671 652 aaPredicted RBP20.97■□□□□ 0.95
PDLIM3-202ENST00000284770 BEX3Q00994 111 aa20.97■□□□□ 0.95
PDLIM3-202ENST00000284770 PSMD2Q13200 908 aa20.97■□□□□ 0.95
PDLIM3-202ENST00000284770 LUZP1Q86V48 1076 aa20.97■□□□□ 0.95
PDLIM3-202ENST00000284770 HMX1Q9NP08 348 aaPredicted RBP20.97■□□□□ 0.95
PDLIM3-202ENST00000284770 PDLIM7Q9NR12 457 aa20.97■□□□□ 0.95
PDLIM3-202ENST00000284770 DDX20Q9UHI6 824 aaKnown RBP20.97■□□□□ 0.95
PDLIM3-202ENST00000284770 TRPC6Q9Y210 931 aa20.97■□□□□ 0.95
PDLIM3-202ENST00000284770 COL4A3BPQ9Y5P4 624 aa20.97■□□□□ 0.95
PDLIM3-202ENST00000284770 RSPH10B2B2RC85 870 aa20.96■□□□□ 0.95
PDLIM3-202ENST00000284770 HIP1RO75146 1068 aa20.96■□□□□ 0.95
PDLIM3-202ENST00000284770 RSPH10BP0C881 870 aa20.96■□□□□ 0.95
PDLIM3-202ENST00000284770 HSPA8P11142 646 aaKnown RBP20.96■□□□□ 0.95
PDLIM3-202ENST00000284770 HERC4Q5GLZ8 1057 aaPredicted RBP20.96■□□□□ 0.95
PDLIM3-202ENST00000284770 BPIFA3Q9BQP9 254 aa20.96■□□□□ 0.95
PDLIM3-202ENST00000284770 ZHX3Q9H4I2 956 aa20.96■□□□□ 0.95
PDLIM3-202ENST00000284770 POLD4Q9HCU8 107 aa20.96■□□□□ 0.95
PDLIM3-202ENST00000284770 XPNPEP3Q9NQH7 507 aa20.96■□□□□ 0.95
PDLIM3-202ENST00000284770 FAM13AO94988 1023 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms