RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 GTPBP3Q969Y2 492 aaKnown RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 YME1L1Q96TA2 773 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 DEF6Q9H4E7 631 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 CRTAC1Q9NQ79 661 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 DIAPH3Q9NSV4 1193 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 CWC25Q9NXE8 425 aaPredicted RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 GPRC5BQ9NZH0 403 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 RPGRIP1LQ68CZ1 1315 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 RHOBTB3O94955 611 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 ANP32AP39687 249 aaKnown RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 GRK6P43250 576 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 MAP3K10Q02779 954 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 SMAD1Q15797 465 aaKnown RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 ADAMTSL4Q6UY14 1074 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 ARHGAP27Q6ZUM4 889 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 Q6ZVU0 165 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 WFDC8Q8IUA0 241 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 SH2D3CQ8N5H7 860 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 KIAA1958Q8N8K9 716 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 PPP1R35Q8TAP8 253 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 ZNF622Q969S3 477 aaKnown RBP eCLIP3.12□□□□□ -1.913e-7■■■□□ 19.1
CHD1-201ENST00000284049 SLC12A5Q9H2X9 1139 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 SPTLC3Q9NUV7 552 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 SF3B6Q9Y3B4 125 aaKnown RBP3.12□□□□□ -1.91
CHD1-201ENST00000284049 DAGLAQ9Y4D2 1042 aa3.12□□□□□ -1.91
CHD1-201ENST00000284049 TET3O43151 1660 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 TRBV23OR9-2A0A075B6M9 112 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 IDEP14735 1019 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 POU3F3P20264 500 aaPredicted RBP3.11□□□□□ -1.91
CHD1-201ENST00000284049 RPS6KB1P23443 525 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 OAS2P29728 719 aaKnown RBP3.11□□□□□ -1.91
CHD1-201ENST00000284049 SRSF2Q01130 221 aaKnown RBP3.11□□□□□ -1.91
CHD1-201ENST00000284049 GOLGA8DPQ0D2H9 430 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 PLCL1Q15111 1095 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 RNF220Q5VTB9 566 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 TSHZ3Q63HK5 1081 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 DSTYKQ6XUX3 929 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 RAPH1Q70E73 1250 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 RSPH3Q86UC2 560 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 SAPCD2Q86UD0 394 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 NME9Q86XW9 330 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 TMEM169Q96HH4 297 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 TAAR9Q96RI9 348 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 MAK16Q9BXY0 300 aaKnown RBP3.11□□□□□ -1.91
CHD1-201ENST00000284049 TAF1DQ9H5J8 278 aaPredicted RBP3.11□□□□□ -1.91
CHD1-201ENST00000284049 PFDN4Q9NQP4 134 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 DPP7Q9UHL4 492 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 IFT172Q9UG01 1749 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 NPATQ14207 1427 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 NPHP3-ACAD11A0A0J9YXS1 232 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 FOXN3O00409 490 aaPredicted RBP3.11□□□□□ -1.91
CHD1-201ENST00000284049 DDX3XO00571 662 aaKnown RBP eCLIP3.11□□□□□ -1.91
CHD1-201ENST00000284049 RGS13O14921 159 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 VAMP4O75379 141 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 SNX16P57768 344 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 SCARA3Q6AZY7 606 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 KDELC2Q7Z4H8 507 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 ZNF295-AS1Q8N0V1 137 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 GOLGA1Q92805 767 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 B3GNT5Q9BYG0 378 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 VEZTQ9HBM0 779 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 CPSF2Q9P2I0 782 aaKnown RBP3.11□□□□□ -1.91
CHD1-201ENST00000284049 A0A0G2JS52 829 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 GOLIM4O00461 696 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 SOAT2O75908 522 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 CD33P20138 364 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 AMPD1P23109 780 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 TNFSF4P23510 183 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 ADH7P40394 386 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 RNASELQ05823 741 aaKnown RBP3.11□□□□□ -1.91
CHD1-201ENST00000284049 MAPK7Q13164 816 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 TMEM240Q5SV17 173 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 KCNT2Q6UVM3 1135 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.11□□□□□ -1.91
CHD1-201ENST00000284049 MAP4K3Q8IVH8 894 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 SLC41A1Q8IVJ1 513 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 AIFM3Q96NN9 605 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 MTFR1LQ9H019 292 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 ORC3Q9UBD5 711 aaPredicted RBP3.11□□□□□ -1.91
CHD1-201ENST00000284049 BAG5Q9UL15 447 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 DENND4BO75064 1496 aaPredicted RBP3.11□□□□□ -1.91
CHD1-201ENST00000284049 CCDC141Q6ZP82 1450 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 CCDC154A6NI56 674 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 SPATA31C2B4DYI2 1134 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 M0R3H8 397 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 POU3F2P20265 443 aaPredicted RBP3.11□□□□□ -1.91
CHD1-201ENST00000284049 BMP6P22004 513 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 LPOP22079 712 aaPredicted RBP3.11□□□□□ -1.91
CHD1-201ENST00000284049 PIP4K2BP78356 416 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 TMEM266Q2M3C6 531 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 TTC31Q49AM3 519 aaPredicted RBP3.11□□□□□ -1.91
CHD1-201ENST00000284049 ESX1Q8N693 406 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 TMCO5AQ8N6Q1 288 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 ZNF610Q8N9Z0 462 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 KDF1Q8NAX2 398 aaPredicted RBP3.11□□□□□ -1.91
CHD1-201ENST00000284049 SLAMF7Q9NQ25 335 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 MSRAQ9UJ68 235 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 FANCAO15360 1455 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 ACKR2O00590 384 aa3.11□□□□□ -1.91
CHD1-201ENST00000284049 TIMP2P16035 220 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms