RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 PARVGQ9HBI0 331 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 SEPT9Q9UHD8 586 aaPredicted RBP12.12□□□□□ -0.47
GGPS1-201ENST00000282841 CPA4Q9UI42 421 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 FRMD3A2A2Y4 597 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 EIF3JO75822 258 aaKnown RBP12.12□□□□□ -0.47
GGPS1-201ENST00000282841 ITGBL1O95965 494 aaPredicted RBP12.12□□□□□ -0.47
GGPS1-201ENST00000282841 TBC1D8BQ0IIM8 1120 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 MAPK7Q13164 816 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 TBX2Q13207 712 aaPredicted RBP12.12□□□□□ -0.47
GGPS1-201ENST00000282841 ADAM9Q13443 819 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 SYCP1Q15431 976 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 CT47A1Q5JQC4 288 aaPredicted RBP12.12□□□□□ -0.47
GGPS1-201ENST00000282841 FAM178BQ8IXR5 827 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 ZSWIM2Q8NEG5 633 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 ZNF668Q96K58 619 aaPredicted RBP12.12□□□□□ -0.47
GGPS1-201ENST00000282841 MMRN2Q9H8L6 949 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 IMPACTQ9P2X3 320 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 COL4A3BPQ9Y5P4 624 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 SOWAHDA6NJG2 315 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 SOCS7O14512 581 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 EPHB6O15197 1021 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 NR2F2P24468 414 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 PBX1P40424 430 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 ZNF157P51786 506 aaPredicted RBP12.12□□□□□ -0.47
GGPS1-201ENST00000282841 PSMD2Q13200 908 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 GNPTABQ3T906 1256 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 MTERF2Q49AM1 385 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 CCDC40Q4G0X9 1142 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 SPRYD7Q5W111 196 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 PPFIBP1Q86W92 1011 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 ZNF592Q92610 1267 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 CEP170P1Q96L14 293 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 CTAGE1Q96RT6 745 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 ZIC5Q96T25 663 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 FAM207AQ9NSI2 230 aaPredicted RBP12.12□□□□□ -0.47
GGPS1-201ENST00000282841 PCDHB13Q9Y5F0 798 aa12.12□□□□□ -0.47
GGPS1-201ENST00000282841 LRRC10BA6NIK2 292 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 GGPS1O95749 300 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 CETPP11597 493 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 PEX3P56589 373 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 GSDMDP57764 484 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 PSMC5P62195 406 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 KRT76Q01546 638 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 HSDL1Q3SXM5 330 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 ZCWPW2Q504Y3 356 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 FIZ1Q96SL8 496 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 MAP7D2Q96T17 732 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 PCIF1Q9H4Z3 704 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 AGPAT5Q9NUQ2 364 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 FBXO40Q9UH90 709 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 PNMA2Q9UL42 364 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 R3HCC1Q9Y3T6 440 aaKnown RBP12.11□□□□□ -0.47
GGPS1-201ENST00000282841 PFASO15067 1338 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 SLC16A4O15374 487 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 ATP4AP20648 1035 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 CYP2J2P51589 502 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 CHMP4BP1P59074 171 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 PRKCEQ02156 737 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 KNOP1Q1ED39 458 aaKnown RBP12.11□□□□□ -0.47
GGPS1-201ENST00000282841 TOGARAM2Q6ZUX3 1019 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 GPRC5AQ8NFJ5 357 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 TSG101Q99816 390 aa12.11□□□□□ -0.47
GGPS1-201ENST00000282841 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.11□□□□□ -0.47
GGPS1-201ENST00000282841 MKI67P46013 3256 aaKnown RBP12.11□□□□□ -0.47
GGPS1-201ENST00000282841 DOCK3Q8IZD9 2030 aa12.1□□□□□ -0.47
GGPS1-201ENST00000282841 TTC26A0AVF1 554 aa12.1□□□□□ -0.47
GGPS1-201ENST00000282841 RASSF10A6NK89 507 aa12.1□□□□□ -0.47
GGPS1-201ENST00000282841 CCDC169A6NNP5 214 aa12.1□□□□□ -0.47
GGPS1-201ENST00000282841 LGALS16A8MUM7 142 aa12.1□□□□□ -0.47
GGPS1-201ENST00000282841 K7ENM7 598 aa12.1□□□□□ -0.47
GGPS1-201ENST00000282841 EEF1GP26641 437 aaKnown RBP12.1□□□□□ -0.47
GGPS1-201ENST00000282841 ADORA2AP29274 412 aa12.1□□□□□ -0.47
GGPS1-201ENST00000282841 GTF2A2P52657 109 aa12.1□□□□□ -0.47
GGPS1-201ENST00000282841 E4F1Q66K89 784 aaPredicted RBP12.1□□□□□ -0.47
GGPS1-201ENST00000282841 LOC285556D6RIA3 1793 aa12.1□□□□□ -0.47
GGPS1-201ENST00000282841 AKR1B15C9JRZ8 316 aaPredicted RBP12.1□□□□□ -0.47
GGPS1-201ENST00000282841 TGFB1I1O43294 461 aa12.1□□□□□ -0.47
GGPS1-201ENST00000282841 JAK3P52333 1124 aa12.1□□□□□ -0.47
GGPS1-201ENST00000282841 FKBP3Q00688 224 aaKnown RBP12.1□□□□□ -0.47
GGPS1-201ENST00000282841 SPAG1Q07617 926 aa12.1□□□□□ -0.47
GGPS1-201ENST00000282841 TMEM139Q8IV31 216 aa12.1□□□□□ -0.47
GGPS1-201ENST00000282841 CCDC150Q8NCX0 1101 aa12.1□□□□□ -0.47
GGPS1-201ENST00000282841 DNERQ8NFT8 737 aa12.1□□□□□ -0.47
GGPS1-201ENST00000282841 ZNF507Q8TCN5 953 aa12.1□□□□□ -0.47
GGPS1-201ENST00000282841 BSNDQ8WZ55 320 aa12.1□□□□□ -0.47
GGPS1-201ENST00000282841 TMEM143Q96AN5 459 aa12.1□□□□□ -0.47
GGPS1-201ENST00000282841 BAG1Q99933 345 aaPredicted RBP12.1□□□□□ -0.47
GGPS1-201ENST00000282841 IGF2BP3O00425 579 aaKnown RBP eCLIP12.09□□□□□ -0.47
GGPS1-201ENST00000282841 AKAP3O75969 853 aa12.09□□□□□ -0.47
GGPS1-201ENST00000282841 DCAF17Q5H9S7 520 aaPredicted RBP12.09□□□□□ -0.47
GGPS1-201ENST00000282841 TCERG1LQ5VWI1 586 aa12.09□□□□□ -0.47
GGPS1-201ENST00000282841 ABHD15Q6UXT9 468 aa12.09□□□□□ -0.47
GGPS1-201ENST00000282841 EPM2AIP1Q7L775 607 aaPredicted RBP12.09□□□□□ -0.47
GGPS1-201ENST00000282841 ZNF720Q7Z2F6 126 aa12.09□□□□□ -0.47
GGPS1-201ENST00000282841 FAM84AQ96KN4 292 aa12.09□□□□□ -0.47
GGPS1-201ENST00000282841 NDST4Q9H3R1 872 aa12.09□□□□□ -0.47
GGPS1-201ENST00000282841 MLXIPQ9HAP2 919 aa12.09□□□□□ -0.47
GGPS1-201ENST00000282841 TFR2Q9UP52 801 aa12.09□□□□□ -0.47
GGPS1-201ENST00000282841 MYH11P35749 1972 aa12.09□□□□□ -0.47
GGPS1-201ENST00000282841 ZMYM2Q9UBW7 1377 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms