RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 KIF11P52732 1056 aa19.71■□□□□ 0.75
CAPN1-201ENST00000279247 SOX10P56693 466 aa19.71■□□□□ 0.75
CAPN1-201ENST00000279247 EDRF1Q3B7T1 1238 aa19.71■□□□□ 0.75
CAPN1-201ENST00000279247 FAM133AQ8N9E0 248 aa19.71■□□□□ 0.75
CAPN1-201ENST00000279247 ZNF112Q9UJU3 913 aa19.71■□□□□ 0.75
CAPN1-201ENST00000279247 PDXKO00764 312 aa19.71■□□□□ 0.75
CAPN1-201ENST00000279247 CCNE2O96020 404 aa19.71■□□□□ 0.75
CAPN1-201ENST00000279247 QARSP47897 775 aaKnown RBP19.71■□□□□ 0.75
CAPN1-201ENST00000279247 KRT83P78385 493 aa19.71■□□□□ 0.75
CAPN1-201ENST00000279247 SUPT20HL1Q3ZLR7 823 aa19.71■□□□□ 0.75
CAPN1-201ENST00000279247 TREML2Q5T2D2 321 aa19.71■□□□□ 0.75
CAPN1-201ENST00000279247 BAP1Q92560 729 aa19.71■□□□□ 0.75
CAPN1-201ENST00000279247 RNF216Q9NWF9 866 aaPredicted RBP19.71■□□□□ 0.75
CAPN1-201ENST00000279247 TRAF3IP3Q9Y228 551 aa19.71■□□□□ 0.75
CAPN1-201ENST00000279247 MYH11P35749 1972 aa19.71■□□□□ 0.75
CAPN1-201ENST00000279247 SRGAP2O75044 1071 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 USP2O75604 605 aaPredicted RBP19.7■□□□□ 0.74
CAPN1-201ENST00000279247 NOL4O94818 638 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 EPB41P11171 864 aaKnown RBP19.7■□□□□ 0.74
CAPN1-201ENST00000279247 GAP43P17677 238 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 XKR9Q5GH70 373 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 GADL1Q6ZQY3 521 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 DNAAF5Q86Y56 855 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 NAPGQ99747 312 aaPredicted RBP19.7■□□□□ 0.74
CAPN1-201ENST00000279247 IFIH1Q9BYX4 1025 aaKnown RBP19.7■□□□□ 0.74
CAPN1-201ENST00000279247 ADARB2Q9NS39 739 aaKnown RBP19.7■□□□□ 0.74
CAPN1-201ENST00000279247 FRMPD4Q14CM0 1322 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 PNMA6AP0CW24 399 aaPredicted RBP19.7■□□□□ 0.74
CAPN1-201ENST00000279247 YWHABP31946 246 aaKnown RBP19.7■□□□□ 0.74
CAPN1-201ENST00000279247 DPY19L2Q6NUT2 758 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 GJB7Q6PEY0 223 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 B3GNT9Q6UX72 402 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 PPP4R3CPQ6ZMV5 832 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 SULF1Q8IWU6 871 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 DAW1Q8N136 415 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 OTUD5Q96G74 571 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 CAPZA3Q96KX2 299 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 PAGR1Q9BTK6 254 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 KIFC3Q9BVG8 833 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 TRIM49P0CI25 452 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 TRIM49CP0CI26 452 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 NAP1L1P55209 391 aaKnown RBP19.7■□□□□ 0.74
CAPN1-201ENST00000279247 FIGNQ5HY92 759 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 PDXDC1Q6P996 788 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.7■□□□□ 0.74
CAPN1-201ENST00000279247 ZNF720Q7Z2F6 126 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 NLRX1Q86UT6 975 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 DCPSQ96C86 337 aaKnown RBP19.7■□□□□ 0.74
CAPN1-201ENST00000279247 ELP3Q9H9T3 547 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 A1CFQ9NQ94 594 aaKnown RBP19.7■□□□□ 0.74
CAPN1-201ENST00000279247 OLFML3Q9NRN5 406 aa19.7■□□□□ 0.74
CAPN1-201ENST00000279247 A0A1W2PQJ5 194 aa19.69■□□□□ 0.74
CAPN1-201ENST00000279247 RPL13P26373 211 aaKnown RBP19.69■□□□□ 0.74
CAPN1-201ENST00000279247 FAM102BQ5T8I3 360 aa19.69■□□□□ 0.74
CAPN1-201ENST00000279247 PSMB7Q99436 277 aa19.69■□□□□ 0.74
CAPN1-201ENST00000279247 MLXIPQ9HAP2 919 aa19.69■□□□□ 0.74
CAPN1-201ENST00000279247 BACH1O14867 736 aa19.69■□□□□ 0.74
CAPN1-201ENST00000279247 KRT86O43790 486 aa19.69■□□□□ 0.74
CAPN1-201ENST00000279247 TADA3O75528 432 aa19.69■□□□□ 0.74
CAPN1-201ENST00000279247 BCRP11274 1271 aa19.69■□□□□ 0.74
CAPN1-201ENST00000279247 RARRES1P49788 294 aa19.69■□□□□ 0.74
CAPN1-201ENST00000279247 DNA2P51530 1060 aa19.69■□□□□ 0.74
CAPN1-201ENST00000279247 CBX1P83916 185 aa19.69■□□□□ 0.74
CAPN1-201ENST00000279247 FSTL1Q12841 308 aa19.69■□□□□ 0.74
CAPN1-201ENST00000279247 HS2ST1Q7LGA3 356 aa19.69■□□□□ 0.74
CAPN1-201ENST00000279247 CLMNQ96JQ2 1002 aa19.69■□□□□ 0.74
CAPN1-201ENST00000279247 SPAG5Q96R06 1193 aa19.69■□□□□ 0.74
CAPN1-201ENST00000279247 TEX13BQ9BXU2 312 aa19.69■□□□□ 0.74
CAPN1-201ENST00000279247 HAUS4Q9H6D7 363 aa19.69■□□□□ 0.74
CAPN1-201ENST00000279247 COL11A1P12107 1806 aaPredicted RBP19.68■□□□□ 0.74
CAPN1-201ENST00000279247 MYH10P35580 1976 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 SPDYE16A6NNV3 312 aaPredicted RBP19.68■□□□□ 0.74
CAPN1-201ENST00000279247 AFPP02771 609 aaKnown RBP19.68■□□□□ 0.74
CAPN1-201ENST00000279247 CNTN2Q02246 1040 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 KIF5AQ12840 1032 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 SFMBT2Q5VUG0 894 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 CATSPERGQ6ZRH7 1159 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 FAM186BQ8IYM0 893 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 ZNF526Q8TF50 670 aaPredicted RBP19.68■□□□□ 0.74
CAPN1-201ENST00000279247 ZNF408Q9H9D4 720 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 ZMYM2Q9UBW7 1377 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 PEX3P56589 373 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 EXOC3L4Q17RC7 722 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 EEPD1Q7L9B9 569 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.68■□□□□ 0.742e-9■□□□□ 10
CAPN1-201ENST00000279247 FIZ1Q96SL8 496 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 GINM1Q9NU53 330 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 AFG3L2Q9Y4W6 797 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 SSC5DA1L4H1 1573 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 EIF3CLB5ME19 914 aaKnown RBP19.68■□□□□ 0.74
CAPN1-201ENST00000279247 C19orf81C9J6K1 198 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 TLR2O60603 784 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 ATP1A1P05023 1023 aaKnown RBP19.68■□□□□ 0.74
CAPN1-201ENST00000279247 CCND2P30279 289 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 MAPK7Q13164 816 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 ANKRD35Q8N283 1001 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 MAP7D2Q96T17 732 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 EIF3CQ99613 913 aaKnown RBP19.68■□□□□ 0.74
CAPN1-201ENST00000279247 GBP3Q9H0R5 595 aa19.68■□□□□ 0.74
CAPN1-201ENST00000279247 TBC1D22BQ9NU19 505 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms