RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 C1orf228Q6PIY5 440 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 POMZP3Q6PJE2 187 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 MPZL3Q6UWV2 235 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 MAATS1Q7Z4T9 603 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 NKAPQ8N5F7 415 aaKnown RBP5.42□□□□□ -1.54
CD44-202ENST00000278385 ANKS4BQ8N8V4 417 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 LINC00116Q8NCU8 138 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 PDZD8Q8NEN9 1154 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 FLAD1Q8NFF5 587 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 MYLIPQ8WY64 445 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 GOLGA1Q92805 767 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 KIRREL1Q96J84 757 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 CDADC1Q9BWV3 514 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 HDAC8Q9BY41 377 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 FOXP3Q9BZS1 431 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 GP6Q9HCN6 339 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 SAGE1Q9NXZ1 904 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 STK26Q9P289 416 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 RGS17Q9UGC6 210 aaPredicted RBP5.42□□□□□ -1.54
CD44-202ENST00000278385 TRHDEQ9UKU6 1024 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 PHTF1Q9UMS5 762 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 TNKSO95271 1327 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 WASHC2AQ641Q2 1341 aa5.42□□□□□ -1.54
CD44-202ENST00000278385 LRPPRCP42704 1394 aaKnown RBP5.42□□□□□ -1.54
CD44-202ENST00000278385 DHX57Q6P158 1386 aaKnown RBP5.42□□□□□ -1.54
CD44-202ENST00000278385 CHD2O14647 1828 aaKnown RBP5.41□□□□□ -1.54
CD44-202ENST00000278385 PRAG1Q86YV5 1406 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 ADGRL3Q9HAR2 1447 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 A0A087WZG4 1122 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 LOC100996750A0A140TA64 210 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 SHISA3A0PJX4 238 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 ANKRD34BA5PLL1 514 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 WASH4PA8MWX3 477 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 CLGNO14967 610 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 FKTNO75072 461 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 MTA2O94776 668 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 BMP8BP34820 402 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 CCT5P48643 541 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 ZNF143P52747 638 aaPredicted RBP5.41□□□□□ -1.54
CD44-202ENST00000278385 TBX2Q13207 712 aaPredicted RBP5.41□□□□□ -1.54
CD44-202ENST00000278385 SNW1Q13573 536 aaKnown RBP5.41□□□□□ -1.54
CD44-202ENST00000278385 ELF2Q15723 593 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 FNDC3BQ53EP0 1204 aaKnown RBP5.41□□□□□ -1.54
CD44-202ENST00000278385 MEX3CQ5U5Q3 659 aaKnown RBP5.41□□□□□ -1.54
CD44-202ENST00000278385 ZNF772Q68DY9 489 aaPredicted RBP5.41□□□□□ -1.54
CD44-202ENST00000278385 NFXL1Q6ZNB6 911 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 CBLL1Q75N03 491 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 LRRTM3Q86VH5 581 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 ZSWIM9Q86XI8 627 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 TPH2Q8IWU9 490 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 LILRA2Q8N149 483 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 CHCHD4Q8N4Q1 142 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 FIBCD1Q8N539 461 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 ZBTB38Q8NAP3 1195 aaPredicted RBP5.41□□□□□ -1.54
CD44-202ENST00000278385 IL17REQ8NFR9 667 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 ABHD4Q8TB40 342 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 FAM168AQ92567 244 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 BRF1Q92994 677 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 CDK5RAP3Q96JB5 506 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 TBATAQ96M53 351 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 HAUS7Q99871 368 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 SPATA9Q9BWV2 254 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 ADAMTS10Q9H324 1103 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 NLRC4Q9NPP4 1024 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 LUC7LQ9NQ29 371 aaKnown RBP5.41□□□□□ -1.54
CD44-202ENST00000278385 KLHL11Q9NVR0 708 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 LRP2BPQ9P2M1 347 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 ADAMTS6Q9UKP5 1117 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 ISY1Q9ULR0 285 aaKnown RBP5.41□□□□□ -1.54
CD44-202ENST00000278385 PCDHB10Q9UN67 800 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 CTNND2Q9UQB3 1225 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 LUC7L2Q9Y383 392 aaKnown RBP5.41□□□□□ -1.54
CD44-202ENST00000278385 FHOD1Q9Y613 1164 aa5.41□□□□□ -1.54
CD44-202ENST00000278385 MST1RQ04912 1400 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 ABHD14A-ACY1A0A1B0GW23 586 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 A0A1W2PQJ5 194 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 A6NCN8 305 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 PLD2O14939 933 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 ADCY3O60266 1144 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 AGR2O95994 175 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 SLC5A1P13866 664 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 TXKP42681 527 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 RXRGP48443 463 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 CLK1P49759 484 aaKnown RBP5.4□□□□□ -1.54
CD44-202ENST00000278385 STRN3Q13033 797 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 PPP2R5DQ14738 602 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 STAT4Q14765 748 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 SPECC1Q5M775 1068 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 CNNM4Q6P4Q7 775 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 EEPD1Q7L9B9 569 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 USHBP1Q8N6Y0 703 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 FRS2Q8WU20 508 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 TTC17Q96AE7 1141 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 PAWRQ96IZ0 340 aaKnown RBP5.4□□□□□ -1.54
CD44-202ENST00000278385 ZDHHC15Q96MV8 337 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 ORAI2Q96SN7 254 aa5.4□□□□□ -1.54
CD44-202ENST00000278385 NOL6Q9H6R4 1146 aaKnown RBP5.4□□□□□ -1.54
CD44-202ENST00000278385 NCOA5Q9HCD5 579 aaKnown RBP5.4□□□□□ -1.54
CD44-202ENST00000278385 TCF7L1Q9HCS4 588 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms