RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 VIPAS39Q9H9C1 493 aa12.37□□□□□ -0.43
SKP2-202ENST00000274255 NKIRAS1Q9NYS0 192 aa12.37□□□□□ -0.43
SKP2-202ENST00000274255 CEP72Q9P209 647 aa12.37□□□□□ -0.43
SKP2-202ENST00000274255 OVOS2A0A0G2JMS6 1433 aa12.37□□□□□ -0.43
SKP2-202ENST00000274255 ENO4A6NNW6 628 aa12.37□□□□□ -0.43
SKP2-202ENST00000274255 TCP10L2B9ZVM9 353 aa12.37□□□□□ -0.43
SKP2-202ENST00000274255 GAS7O60861 476 aa12.37□□□□□ -0.43
SKP2-202ENST00000274255 CASP5P51878 434 aa12.37□□□□□ -0.43
SKP2-202ENST00000274255 SLC29A2Q14542 456 aa12.37□□□□□ -0.43
SKP2-202ENST00000274255 ZNF365Q70YC5 407 aa12.37□□□□□ -0.43
SKP2-202ENST00000274255 ZNF571Q7Z3V5 609 aaPredicted RBP12.37□□□□□ -0.43
SKP2-202ENST00000274255 PRPF38AQ8NAV1 312 aaKnown RBP12.37□□□□□ -0.43
SKP2-202ENST00000274255 ZNF668Q96K58 619 aaPredicted RBP12.37□□□□□ -0.43
SKP2-202ENST00000274255 NYXQ9GZU5 481 aa12.37□□□□□ -0.43
SKP2-202ENST00000274255 MTUS1Q9ULD2 1270 aa12.37□□□□□ -0.43
SKP2-202ENST00000274255 USP20Q9Y2K6 914 aa12.37□□□□□ -0.43
SKP2-202ENST00000274255 RIC1Q4ADV7 1423 aa12.37□□□□□ -0.43
SKP2-202ENST00000274255 A0A1B0GUA9 196 aa12.37□□□□□ -0.43
SKP2-202ENST00000274255 NR3C1P04150 777 aa12.37□□□□□ -0.43
SKP2-202ENST00000274255 COG2Q14746 738 aa12.37□□□□□ -0.43
SKP2-202ENST00000274255 MIGA2Q7L4E1 593 aa12.37□□□□□ -0.43
SKP2-202ENST00000274255 HOOK3Q86VS8 718 aa12.37□□□□□ -0.43
SKP2-202ENST00000274255 NSRP1Q9H0G5 558 aaKnown RBP12.37□□□□□ -0.43
SKP2-202ENST00000274255 SERPINB13Q9UIV8 391 aa12.37□□□□□ -0.43
SKP2-202ENST00000274255 GRID2IPA4D2P6 1211 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 RASGRF2O14827 1237 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 IFI35P80217 286 aaPredicted RBP12.36□□□□□ -0.43
SKP2-202ENST00000274255 MXRA7P84157 204 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 LRRC63Q05C16 580 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 SEPT2Q15019 361 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 QPCTQ16769 361 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 ZNF394Q53GI3 561 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 USP38Q8NB14 1042 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 WHAMMQ8TF30 809 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 ZNF384Q8TF68 577 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 AENQ8WTP8 325 aaKnown RBP12.36□□□□□ -0.43
SKP2-202ENST00000274255 RAPGEF5Q92565 580 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 C9orf72Q96LT7 481 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 NT5C3AQ9H0P0 336 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 HMGB1P1B2RPK0 211 aaPredicted RBP12.36□□□□□ -0.43
SKP2-202ENST00000274255 TMED2Q15363 201 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 ECM1Q16610 540 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 QRICH1Q2TAL8 776 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 WDR78Q5VTH9 848 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 INTS5Q6P9B9 1019 aaKnown RBP12.36□□□□□ -0.43
SKP2-202ENST00000274255 MMGT1Q8N4V1 131 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 SLC35G2Q8TBE7 412 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 EPS8L3Q8TE67 593 aaKnown RBP12.36□□□□□ -0.43
SKP2-202ENST00000274255 PSMD1Q99460 953 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 ANO3Q9BYT9 981 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 YIPF3Q9GZM5 350 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 BLOC1S4Q9NUP1 217 aa12.36□□□□□ -0.43
SKP2-202ENST00000274255 CHUKO15111 745 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 SLF2Q8IX21 1173 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 UBL4BQ8N7F7 174 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 FBXO25Q8TCJ0 367 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 NEK9Q8TD19 979 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 ZNF653Q96CK0 615 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 PNMA5Q96PV4 448 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 ERGIC2Q96RQ1 377 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 REEP2Q9BRK0 252 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 RAB17Q9H0T7 212 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 RIC8AQ9NPQ8 531 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 FGFR1OP2Q9NVK5 253 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 FTLP02792 175 aaPredicted RBP12.35□□□□□ -0.43
SKP2-202ENST00000274255 PRKG1Q13976 671 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 PARP9Q8IXQ6 854 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 ATG4AQ8WYN0 398 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 C18orf8Q96DM3 657 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 POP1Q99575 1024 aaKnown RBP12.35□□□□□ -0.43
SKP2-202ENST00000274255 C7orf25Q9BPX7 421 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.35□□□□□ -0.43
SKP2-202ENST00000274255 TISP43B9A030 160 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 ORC4O43929 436 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 PPP1R2P41236 205 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 NEDD9Q14511 834 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 CDC37Q16543 378 aaPredicted RBP12.35□□□□□ -0.43
SKP2-202ENST00000274255 CERKLQ49MI3 558 aaPredicted RBP12.35□□□□□ -0.43
SKP2-202ENST00000274255 DAB2IPQ5VWQ8 1189 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 SAAL1Q96ER3 474 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 PWWP2AQ96N64 755 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 CD209Q9NNX6 404 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 STK17AQ9UEE5 414 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 DCTN4Q9UJW0 460 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 NR2E1Q9Y466 385 aa12.35□□□□□ -0.43
SKP2-202ENST00000274255 TCP11X1B4DZS4 312 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 GOLGA8RI6L899 631 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 DIAPH2O60879 1101 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 LACTBP83111 547 aaPredicted RBP12.34□□□□□ -0.43
SKP2-202ENST00000274255 ICA1Q05084 483 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 KCNMA1Q12791 1236 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 FAM102BQ5T8I3 360 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 KLF6Q99612 283 aaPredicted RBP12.34□□□□□ -0.43
SKP2-202ENST00000274255 C3P01024 1663 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 MED24O75448 989 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 SHBGP04278 402 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 LRCH2Q5VUJ6 765 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 LRRC34Q8IZ02 419 aa12.34□□□□□ -0.43
SKP2-202ENST00000274255 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■■■■□ 19.8
SKP2-202ENST00000274255 CUEDC2Q9H467 287 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms