RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 ADGRG1Q9Y653 693 aa16.86■□□□□ 0.29
SF3B4-201ENST00000271628 PFASO15067 1338 aa16.86■□□□□ 0.29
SF3B4-201ENST00000271628 IQCA1LA6NCM1 817 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 SPDYE5A6NIY4 337 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 SFI1A8K8P3 1242 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 DKC1O60832 514 aaKnown RBP eCLIP16.85■□□□□ 0.29
SF3B4-201ENST00000271628 RARRES1P49788 294 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 TTLL12Q14166 644 aaPredicted RBP16.85■□□□□ 0.29
SF3B4-201ENST00000271628 MTF1Q14872 753 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 PADI6Q6TGC4 694 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 GADL1Q6ZQY3 521 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 ZNF720Q7Z2F6 126 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 FRMD5Q7Z6J6 570 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 TRIM59Q8IWR1 403 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 CNKSR2Q8WXI2 1034 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 OTUD5Q96G74 571 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 LARSQ9P2J5 1176 aaKnown RBP16.85■□□□□ 0.29
SF3B4-201ENST00000271628 PCDHA10Q9Y5I2 948 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 NKRFO15226 690 aaKnown RBP eCLIP16.85■□□□□ 0.29
SF3B4-201ENST00000271628 YWHABP31946 246 aaKnown RBP16.85■□□□□ 0.29
SF3B4-201ENST00000271628 ERVK-24P63145 666 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 IRX3P78415 501 aaPredicted RBP16.85■□□□□ 0.29
SF3B4-201ENST00000271628 ODR4Q5SWX8 454 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 RIOX2Q8IUF8 465 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 ANKRD35Q8N283 1001 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 UBXN4Q92575 508 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 CCDC43Q96MW1 224 aaKnown RBP16.85■□□□□ 0.29
SF3B4-201ENST00000271628 EDEM3Q9BZQ6 932 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 METTL14Q9HCE5 456 aaKnown RBP16.85■□□□□ 0.29
SF3B4-201ENST00000271628 SIK3Q9Y2K2 1263 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 LOC285556D6RIA3 1793 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 NFASCO94856 1347 aa16.85■□□□□ 0.29
SF3B4-201ENST00000271628 RASSF10A6NK89 507 aa16.84■□□□□ 0.29
SF3B4-201ENST00000271628 MAPTP10636 758 aaKnown RBP16.84■□□□□ 0.29
SF3B4-201ENST00000271628 HOXD13P35453 343 aa16.84■□□□□ 0.29
SF3B4-201ENST00000271628 STXBP2Q15833 593 aa16.84■□□□□ 0.29
SF3B4-201ENST00000271628 MEA1Q16626 185 aa16.84■□□□□ 0.29
SF3B4-201ENST00000271628 NFIL3Q16649 462 aa16.84■□□□□ 0.29
SF3B4-201ENST00000271628 ARMC9Q7Z3E5 817 aa16.84■□□□□ 0.29
SF3B4-201ENST00000271628 MOV10L1Q9BXT6 1211 aaKnown RBP16.84■□□□□ 0.29
SF3B4-201ENST00000271628 ANKEF1Q9NU02 776 aa16.84■□□□□ 0.29
SF3B4-201ENST00000271628 AGPAT5Q9NUQ2 364 aa16.84■□□□□ 0.29
SF3B4-201ENST00000271628 KCNH4Q9UQ05 1017 aa16.84■□□□□ 0.29
SF3B4-201ENST00000271628 EFCAB8A8MWE9 144 aa16.84■□□□□ 0.29
SF3B4-201ENST00000271628 SLC16A3O15427 465 aaKnown RBP16.84■□□□□ 0.29
SF3B4-201ENST00000271628 HIP1RO75146 1068 aa16.84■□□□□ 0.29
SF3B4-201ENST00000271628 URI1O94763 535 aaPredicted RBP16.84■□□□□ 0.29
SF3B4-201ENST00000271628 PPIL2Q13356 520 aa16.84■□□□□ 0.29
SF3B4-201ENST00000271628 PNMA8AQ86V59 439 aaPredicted RBP16.84■□□□□ 0.29
SF3B4-201ENST00000271628 MNS1Q8NEH6 495 aa16.84■□□□□ 0.29
SF3B4-201ENST00000271628 DESI2Q9BSY9 194 aa16.84■□□□□ 0.29
SF3B4-201ENST00000271628 MMRN2Q9H8L6 949 aa16.84■□□□□ 0.29
SF3B4-201ENST00000271628 POLD4Q9HCU8 107 aa16.84■□□□□ 0.29
SF3B4-201ENST00000271628 SRCAPQ6ZRS2 3230 aa16.83■□□□□ 0.29
SF3B4-201ENST00000271628 SCN4AP35499 1836 aa16.83■□□□□ 0.29
SF3B4-201ENST00000271628 A0A0G2JMZ2 1700 aa16.83■□□□□ 0.28
SF3B4-201ENST00000271628 KCNA2P16389 499 aa16.83■□□□□ 0.28
SF3B4-201ENST00000271628 NMT1P30419 496 aaKnown RBP16.83■□□□□ 0.28
SF3B4-201ENST00000271628 KLK7P49862 253 aa16.83■□□□□ 0.28
SF3B4-201ENST00000271628 CDK17Q00537 523 aa16.83■□□□□ 0.28
SF3B4-201ENST00000271628 ALCAMQ13740 583 aa16.83■□□□□ 0.28
SF3B4-201ENST00000271628 BMS1Q14692 1282 aaKnown RBP16.83■□□□□ 0.28
SF3B4-201ENST00000271628 FASTKD5Q7L8L6 764 aaKnown RBP16.83■□□□□ 0.28
SF3B4-201ENST00000271628 GOLGA5Q8TBA6 731 aa16.83■□□□□ 0.28
SF3B4-201ENST00000271628 FIZ1Q96SL8 496 aa16.83■□□□□ 0.28
SF3B4-201ENST00000271628 SPATC1LQ9H0A9 340 aa16.83■□□□□ 0.28
SF3B4-201ENST00000271628 ARGLU1Q9NWB6 273 aaPredicted RBP16.83■□□□□ 0.28
SF3B4-201ENST00000271628 ARMCX3Q9UH62 379 aaPredicted RBP16.83■□□□□ 0.28
SF3B4-201ENST00000271628 AGTPBP1Q9UPW5 1226 aa16.83■□□□□ 0.28
SF3B4-201ENST00000271628 EPN1Q9Y6I3 576 aaPredicted RBP16.83■□□□□ 0.28
SF3B4-201ENST00000271628 MYH11P35749 1972 aa16.83■□□□□ 0.28
SF3B4-201ENST00000271628 SPATA31C2B4DYI2 1134 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 EIF3JO75822 258 aaKnown RBP16.82■□□□□ 0.28
SF3B4-201ENST00000271628 CCNE2O96020 404 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 NR3C1P04150 777 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 GPR162Q16538 588 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 OTUD6AQ7L8S5 288 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 HS2ST1Q7LGA3 356 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 CCDC170Q8IYT3 715 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 NEK11Q8NG66 645 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 ATP6V0A1Q93050 837 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 CLMNQ96JQ2 1002 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 CHP1Q99653 195 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 BTBD7Q9P203 1132 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 PLAGL2Q9UPG8 496 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 ASTN1O14525 1302 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 TGFB1I1O43294 461 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 RGS20O76081 388 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 NDUFA10O95299 355 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 EPB41P11171 864 aaKnown RBP16.82■□□□□ 0.28
SF3B4-201ENST00000271628 CASQ1P31415 396 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 HNRNPH3P31942 346 aaKnown RBP16.82■□□□□ 0.28
SF3B4-201ENST00000271628 MAPK7Q13164 816 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 ARHGAP29Q52LW3 1261 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 WDR59Q6PJI9 974 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 SLC17A8Q8NDX2 589 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 DRC1Q96MC2 740 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 TAF1DQ9H5J8 278 aaPredicted RBP16.82■□□□□ 0.28
SF3B4-201ENST00000271628 KIAA1217Q5T5P2 1943 aa16.82■□□□□ 0.28
SF3B4-201ENST00000271628 GRIN3BO60391 1043 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms