RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 MYH11P35749 1972 aa15.61■□□□□ 0.09
SS18-201ENST00000269137 A0A1B0GTH6 734 aa15.61■□□□□ 0.09
SS18-201ENST00000269137 SORBS3O60504 671 aa15.61■□□□□ 0.09
SS18-201ENST00000269137 HIP1RO75146 1068 aa15.61■□□□□ 0.09
SS18-201ENST00000269137 EEF1GP26641 437 aaKnown RBP15.61■□□□□ 0.09
SS18-201ENST00000269137 PRKCEQ02156 737 aa15.61■□□□□ 0.09
SS18-201ENST00000269137 ZCWPW2Q504Y3 356 aa15.61■□□□□ 0.09
SS18-201ENST00000269137 TCP11X2Q5H9J9 407 aa15.61■□□□□ 0.09
SS18-201ENST00000269137 TAPT1Q6NXT6 567 aa15.61■□□□□ 0.09
SS18-201ENST00000269137 MYCT1Q8N699 235 aa15.61■□□□□ 0.09
SS18-201ENST00000269137 SPC24Q8NBT2 197 aa15.61■□□□□ 0.09
SS18-201ENST00000269137 AFAP1L1Q8TED9 768 aa15.61■□□□□ 0.09
SS18-201ENST00000269137 TSG101Q99816 390 aa15.61■□□□□ 0.09
SS18-201ENST00000269137 KATNBL1Q9H079 304 aa15.61■□□□□ 0.09
SS18-201ENST00000269137 MRPL44Q9H9J2 332 aaKnown RBP15.61■□□□□ 0.09
SS18-201ENST00000269137 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.61■□□□□ 0.09
SS18-201ENST00000269137 SFI1A8K8P3 1242 aa15.6■□□□□ 0.09
SS18-201ENST00000269137 KCNJ18B7U540 433 aa15.6■□□□□ 0.09
SS18-201ENST00000269137 EIF3DO15371 548 aaKnown RBP eCLIP15.6■□□□□ 0.09
SS18-201ENST00000269137 CA12O43570 354 aa15.6■□□□□ 0.09
SS18-201ENST00000269137 SNAI1O95863 264 aaPredicted RBP15.6■□□□□ 0.09
SS18-201ENST00000269137 HOXC6P09630 235 aa15.6■□□□□ 0.09
SS18-201ENST00000269137 TXNP10599 105 aaKnown RBP15.6■□□□□ 0.09
SS18-201ENST00000269137 MAP2K5Q13163 448 aa15.6■□□□□ 0.09
SS18-201ENST00000269137 CRHR2Q13324 411 aa15.6■□□□□ 0.09
SS18-201ENST00000269137 KCNJ12Q14500 433 aa15.6■□□□□ 0.09
SS18-201ENST00000269137 NR1I3Q14994 352 aa15.6■□□□□ 0.09
SS18-201ENST00000269137 FAM114A1Q8IWE2 563 aa15.6■□□□□ 0.09
SS18-201ENST00000269137 ANKRD20A12PQ8NF67 263 aa15.6■□□□□ 0.09
SS18-201ENST00000269137 ZNF507Q8TCN5 953 aa15.6■□□□□ 0.09
SS18-201ENST00000269137 FIZ1Q96SL8 496 aa15.6■□□□□ 0.09
SS18-201ENST00000269137 ZIC5Q96T25 663 aa15.6■□□□□ 0.09
SS18-201ENST00000269137 TINF2Q9BSI4 451 aa15.6■□□□□ 0.09
SS18-201ENST00000269137 KCTD10Q9H3F6 313 aa15.6■□□□□ 0.09
SS18-201ENST00000269137 PDGFCQ9NRA1 345 aa15.6■□□□□ 0.09
SS18-201ENST00000269137 TMEM150BA6NC51 233 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 USO1O60763 962 aaKnown RBP15.59■□□□□ 0.09
SS18-201ENST00000269137 FGFR1OPO95684 399 aaKnown RBP15.59■□□□□ 0.09
SS18-201ENST00000269137 ALDH1A1P00352 501 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 MAPTP10636 758 aaKnown RBP15.59■□□□□ 0.09
SS18-201ENST00000269137 ATP4AP20648 1035 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 CASP5P51878 434 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 NPEPPSP55786 919 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 NOGQ13253 232 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 IRF5Q13568 498 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 KRT31Q15323 416 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 FAM160B1Q5W0V3 765 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 PLA2G4FQ68DD2 849 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 PPP4R3CPQ6ZMV5 832 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 DHX37Q8IY37 1157 aaKnown RBP15.59■□□□□ 0.09
SS18-201ENST00000269137 USP6NLQ92738 828 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 CEP170P1Q96L14 293 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 DRC1Q96MC2 740 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 PCYT2Q99447 389 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 GPR20Q99678 358 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 POLD4Q9HCU8 107 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 RRAGDQ9NQL2 400 aaPredicted RBP15.59■□□□□ 0.09
SS18-201ENST00000269137 INTS13Q9NVM9 706 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 IMPACTQ9P2X3 320 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 UBE4BO95155 1302 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 LGR5O75473 907 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 OATP04181 439 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 TCF7P36402 384 aaPredicted RBP15.59■□□□□ 0.09
SS18-201ENST00000269137 ODR4Q5SWX8 454 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 CYP4F22Q6NT55 531 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 STXBP4Q6ZWJ1 553 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 ZNF720Q7Z2F6 126 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 FAM178BQ8IXR5 827 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 NPLOC4Q8TAT6 608 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 NIFKQ9BYG3 293 aaKnown RBP15.59■□□□□ 0.09
SS18-201ENST00000269137 ABHD16BQ9H3Z7 469 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 PDLIM7Q9NR12 457 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 CYP26B1Q9NR63 512 aa15.59■□□□□ 0.09
SS18-201ENST00000269137 LARSQ9P2J5 1176 aaKnown RBP15.59■□□□□ 0.09
SS18-201ENST00000269137 ARID2Q68CP9 1835 aa15.58■□□□□ 0.08
SS18-201ENST00000269137 DGAT1O75907 488 aa15.58■□□□□ 0.08
SS18-201ENST00000269137 MYBP10242 640 aa15.58■□□□□ 0.08
SS18-201ENST00000269137 PLS3P13797 630 aa15.58■□□□□ 0.08
SS18-201ENST00000269137 HOXD13P35453 343 aa15.58■□□□□ 0.08
SS18-201ENST00000269137 STAT5BP51692 787 aa15.58■□□□□ 0.08
SS18-201ENST00000269137 FKBP3Q00688 224 aaKnown RBP15.58■□□□□ 0.08
SS18-201ENST00000269137 LAMC2Q13753 1193 aa15.58■□□□□ 0.08
SS18-201ENST00000269137 KNOP1Q1ED39 458 aaKnown RBP15.58■□□□□ 0.08
SS18-201ENST00000269137 EDRF1Q3B7T1 1238 aa15.58■□□□□ 0.08
SS18-201ENST00000269137 HSDL1Q3SXM5 330 aa15.58■□□□□ 0.08
SS18-201ENST00000269137 FILIP1LQ4L180 1135 aa15.58■□□□□ 0.08
SS18-201ENST00000269137 LRRC55Q6ZSA7 311 aa15.58■□□□□ 0.08
SS18-201ENST00000269137 VSTM4Q8IW00 320 aa15.58■□□□□ 0.08
SS18-201ENST00000269137 ZC3H3Q8IXZ2 948 aaKnown RBP15.58■□□□□ 0.08
SS18-201ENST00000269137 REM2Q8IYK8 340 aaPredicted RBP15.58■□□□□ 0.08
SS18-201ENST00000269137 EMID1Q96A84 441 aaPredicted RBP15.58■□□□□ 0.08
SS18-201ENST00000269137 SPATA33Q96N06 139 aa15.58■□□□□ 0.08
SS18-201ENST00000269137 STRA6Q9BX79 667 aa15.58■□□□□ 0.08
SS18-201ENST00000269137 MAGEC2Q9UBF1 373 aaPredicted RBP15.58■□□□□ 0.08
SS18-201ENST00000269137 SEPT9Q9UHD8 586 aaPredicted RBP15.58■□□□□ 0.08
SS18-201ENST00000269137 TRAF3IP3Q9Y228 551 aa15.58■□□□□ 0.08
SS18-201ENST00000269137 RASSF10A6NK89 507 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 NOP56O00567 594 aaKnown RBP15.57■□□□□ 0.08
SS18-201ENST00000269137 PDXKO00764 312 aa15.57■□□□□ 0.08
SS18-201ENST00000269137 GCNT3O95395 438 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms