RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 ITIH3Q06033 890 aa18.32■□□□□ 0.52
SQLE-201ENST00000265896 ITGB3BPQ13352 177 aaPredicted RBP18.32■□□□□ 0.52
SQLE-201ENST00000265896 KNOP1Q1ED39 458 aaKnown RBP18.32■□□□□ 0.52
SQLE-201ENST00000265896 GBP6Q6ZN66 633 aa18.32■□□□□ 0.52
SQLE-201ENST00000265896 TPCN2Q8NHX9 752 aa18.32■□□□□ 0.52
SQLE-201ENST00000265896 IPO4Q8TEX9 1081 aaKnown RBP18.32■□□□□ 0.52
SQLE-201ENST00000265896 EPN3Q9H201 632 aa18.32■□□□□ 0.52
SQLE-201ENST00000265896 DNM3Q9UQ16 869 aa18.32■□□□□ 0.52
SQLE-201ENST00000265896 THRAP3Q9Y2W1 955 aaKnown RBP18.32■□□□□ 0.52
SQLE-201ENST00000265896 DDX60LQ5H9U9 1706 aaKnown RBP18.32■□□□□ 0.52
SQLE-201ENST00000265896 FOXO6A8MYZ6 492 aa18.32■□□□□ 0.52
SQLE-201ENST00000265896 ATMINO43313 823 aaPredicted RBP18.32■□□□□ 0.52
SQLE-201ENST00000265896 BUB1BO60566 1050 aaPredicted RBP18.32■□□□□ 0.52
SQLE-201ENST00000265896 SPATA31C1P0DKV0 1188 aa18.32■□□□□ 0.52
SQLE-201ENST00000265896 MYCT1Q8N699 235 aa18.32■□□□□ 0.52
SQLE-201ENST00000265896 FAM84AQ96KN4 292 aa18.32■□□□□ 0.52
SQLE-201ENST00000265896 JPH2Q9BR39 696 aaPredicted RBP18.32■□□□□ 0.52
SQLE-201ENST00000265896 CCDC113Q9H0I3 377 aa18.32■□□□□ 0.52
SQLE-201ENST00000265896 PCIF1Q9H4Z3 704 aa18.32■□□□□ 0.52
SQLE-201ENST00000265896 ERVK-5Q9HDB9 667 aa18.32■□□□□ 0.52
SQLE-201ENST00000265896 AIPL1Q9NZN9 384 aa18.32■□□□□ 0.52
SQLE-201ENST00000265896 SHBGP04278 402 aa18.31■□□□□ 0.52
SQLE-201ENST00000265896 CLK2P49760 499 aaKnown RBP18.31■□□□□ 0.52
SQLE-201ENST00000265896 COBLL1Q53SF7 1204 aa18.31■□□□□ 0.52
SQLE-201ENST00000265896 SLFN13Q68D06 897 aa18.31■□□□□ 0.52
SQLE-201ENST00000265896 CDC42EP5Q6NZY7 148 aa18.31■□□□□ 0.52
SQLE-201ENST00000265896 ARHGEF26Q96DR7 871 aa18.31■□□□□ 0.52
SQLE-201ENST00000265896 NT5C3AQ9H0P0 336 aa18.31■□□□□ 0.52
SQLE-201ENST00000265896 DNAJC18Q9H819 358 aa18.31■□□□□ 0.52
SQLE-201ENST00000265896 CCDC88AQ3V6T2 1871 aa18.31■□□□□ 0.52
SQLE-201ENST00000265896 DDTLA6NHG4 134 aaPredicted RBP18.31■□□□□ 0.52
SQLE-201ENST00000265896 PGRMC1O00264 195 aaKnown RBP18.31■□□□□ 0.52
SQLE-201ENST00000265896 EVI5O60447 810 aa18.31■□□□□ 0.52
SQLE-201ENST00000265896 PLCG2P16885 1265 aa18.31■□□□□ 0.52
SQLE-201ENST00000265896 USP11P51784 963 aa18.31■□□□□ 0.52
SQLE-201ENST00000265896 GABPAQ06546 454 aa18.31■□□□□ 0.52
SQLE-201ENST00000265896 IFFO1Q0D2I5 559 aa18.31■□□□□ 0.52
SQLE-201ENST00000265896 PHLDB2Q86SQ0 1253 aa18.31■□□□□ 0.52
SQLE-201ENST00000265896 SCAF8Q9UPN6 1271 aaKnown RBP18.31■□□□□ 0.52
SQLE-201ENST00000265896 SNX24Q9Y343 169 aa18.31■□□□□ 0.52
SQLE-201ENST00000265896 COL22A1Q8NFW1 1626 aaPredicted RBP18.31■□□□□ 0.52
SQLE-201ENST00000265896 MEIS2O14770 477 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 H2AFZP0C0S5 128 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 EPB41P11171 864 aaKnown RBP18.3■□□□□ 0.52
SQLE-201ENST00000265896 KRT13P13646 458 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 SKOR1P84550 965 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 KDM7AQ6ZMT4 941 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 MMS22LQ6ZRQ5 1243 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 H2AFVQ71UI9 128 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 BANK1Q8NDB2 785 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 LNX1Q8TBB1 728 aaPredicted RBP18.3■□□□□ 0.52
SQLE-201ENST00000265896 CEP63Q96MT8 703 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 MEFVO15553 781 aaPredicted RBP18.3■□□□□ 0.52
SQLE-201ENST00000265896 CALCAP01258 141 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 MARCKSL1P49006 195 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 PLTPP55058 493 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 CCDC38Q502W7 563 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 LRRC57Q8N9N7 239 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 DNAJC17Q9NVM6 304 aaKnown RBP18.3■□□□□ 0.52
SQLE-201ENST00000265896 TSKSQ9UJT2 592 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 TBCAO75347 108 aaKnown RBP18.3■□□□□ 0.52
SQLE-201ENST00000265896 CFBP00751 764 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 CBWD6Q4V339 395 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 GLE1Q53GS7 698 aaKnown RBP18.3■□□□□ 0.52
SQLE-201ENST00000265896 CBWD3Q5JTY5 395 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 CBWD5Q5RIA9 395 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 SLC35G2Q8TBE7 412 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 SLC35C1Q96A29 364 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 ZBTB21Q9ULJ3 1066 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 PTPN22Q9Y2R2 807 aa18.3■□□□□ 0.52
SQLE-201ENST00000265896 TNRC6CQ9HCJ0 1690 aaKnown RBP18.29■□□□□ 0.52
SQLE-201ENST00000265896 SPDYE3A6NKU9 549 aa18.29■□□□□ 0.52
SQLE-201ENST00000265896 BTBD6Q96KE9 485 aa18.29■□□□□ 0.52
SQLE-201ENST00000265896 SELENOSQ9BQE4 189 aa18.29■□□□□ 0.52
SQLE-201ENST00000265896 LRRC27Q9C0I9 530 aa18.29■□□□□ 0.52
SQLE-201ENST00000265896 TMBIM4Q9HC24 238 aa18.29■□□□□ 0.52
SQLE-201ENST00000265896 PNMA2Q9UL42 364 aa18.29■□□□□ 0.52
SQLE-201ENST00000265896 ASTN1O14525 1302 aa18.29■□□□□ 0.52
SQLE-201ENST00000265896 LOC102724159A0A0B4J2E5 919 aa18.29■□□□□ 0.52
SQLE-201ENST00000265896 SNHG28P0DPA3 235 aa18.29■□□□□ 0.52
SQLE-201ENST00000265896 IL1R1P14778 569 aa18.29■□□□□ 0.52
SQLE-201ENST00000265896 IFNAR2P48551 515 aa18.29■□□□□ 0.52
SQLE-201ENST00000265896 ADCY1Q08828 1119 aa18.29■□□□□ 0.52
SQLE-201ENST00000265896 PWP2Q15269 919 aaKnown RBP18.29■□□□□ 0.52
SQLE-201ENST00000265896 ZSWIM2Q8NEG5 633 aa18.29■□□□□ 0.52
SQLE-201ENST00000265896 CYFIP2Q96F07 1278 aa18.29■□□□□ 0.52
SQLE-201ENST00000265896 THAP2Q9H0W7 228 aa18.29■□□□□ 0.52
SQLE-201ENST00000265896 ISCUQ9H1K1 167 aa18.29■□□□□ 0.52
SQLE-201ENST00000265896 MLXIPLQ9NP71 852 aa18.29■□□□□ 0.52
SQLE-201ENST00000265896 MYH7BA7E2Y1 1941 aa18.29■□□□□ 0.52
SQLE-201ENST00000265896 COL16A1Q07092 1604 aaPredicted RBP18.29■□□□□ 0.52
SQLE-201ENST00000265896 JAG1P78504 1218 aa18.28■□□□□ 0.52
SQLE-201ENST00000265896 EPHA7Q15375 998 aa18.28■□□□□ 0.52
SQLE-201ENST00000265896 DPY19L2P1Q6NXN4 242 aa18.28■□□□□ 0.52
SQLE-201ENST00000265896 SLC20A1Q8WUM9 679 aa18.28■□□□□ 0.52
SQLE-201ENST00000265896 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.28■□□□□ 0.524e-12■■□□□ 12.1
SQLE-201ENST00000265896 ZC3H12CQ9C0D7 883 aaKnown RBP18.28■□□□□ 0.52
SQLE-201ENST00000265896 SIX2Q9NPC8 291 aa18.28■□□□□ 0.52
SQLE-201ENST00000265896 SMCHD1A6NHR9 2005 aa18.28■□□□□ 0.52
SQLE-201ENST00000265896 MSH4O15457 936 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms