RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SUDS3Q9H7L9 328 aaPredicted RBP9.53□□□□□ -0.88
VAPB-201ENST00000265619 ARMT1Q9H993 441 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 SAMD15Q9P1V8 674 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 TMEM59LQ9UK28 342 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 ZNF532Q9HCE3 1301 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 TAF1P21675 1872 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 ADAMTS7Q9UKP4 1686 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 COPB2P35606 906 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 SERPINB4P48594 390 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 MPP3Q13368 585 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 CGB2Q6NT52 195 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 TRIM51Q9BSJ1 452 aa9.53□□□□□ -0.88
VAPB-201ENST00000265619 RBM47A0AV96 593 aaKnown RBP9.52□□□□□ -0.89
VAPB-201ENST00000265619 PP2D1A8MPX8 630 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 C6orf229H3BNL8 230 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 TTI1O43156 1089 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 GPAA1O43292 621 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 CREB3O43889 395 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 RASA1P20936 1047 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 MMP13P45452 471 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 ATP11AP98196 1134 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 NRG4Q8WWG1 115 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 RAB17Q9H0T7 212 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 RNPEPL1Q9HAU8 725 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 METTL5Q9NRN9 209 aaKnown RBP9.52□□□□□ -0.89
VAPB-201ENST00000265619 NARFQ9UHQ1 456 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 NR2E1Q9Y466 385 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 DCAF8L1A6NGE4 600 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 H7C1D1 291 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 HNRNPRO43390 633 aaKnown RBP9.52□□□□□ -0.89
VAPB-201ENST00000265619 HIP1RO75146 1068 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 CALB2P22676 271 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 DNM2P50570 870 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 MCL1Q07820 350 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 TXNRD1Q16881 649 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 RBM26Q5T8P6 1007 aaKnown RBP9.52□□□□□ -0.89
VAPB-201ENST00000265619 TTI2Q6NXR4 508 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 KSR1Q8IVT5 923 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.52□□□□□ -0.89
VAPB-201ENST00000265619 ETNK2Q9NVF9 386 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.52□□□□□ -0.89
VAPB-201ENST00000265619 SWAP70Q9UH65 585 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 PLAGL2Q9UPG8 496 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 SLC4A4Q9Y6R1 1079 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 SIGLEC16A6NMB1 481 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 PRKAB2O43741 272 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 CIAO1O76071 339 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 MBD4O95243 580 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 EIF4BP23588 611 aaKnown RBP9.52□□□□□ -0.89
VAPB-201ENST00000265619 ENOX2Q16206 610 aaKnown RBP9.52□□□□□ -0.89
VAPB-201ENST00000265619 ASTE1Q2TB18 679 aaPredicted RBP9.52□□□□□ -0.89
VAPB-201ENST00000265619 RRAGAQ7L523 313 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 PALB2Q86YC2 1186 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 SPATA5Q8NB90 893 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 FERMT2Q96AC1 680 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 RNF25Q96BH1 459 aaPredicted RBP9.52□□□□□ -0.89
VAPB-201ENST00000265619 FOXP1Q9H334 677 aaPredicted RBP9.52□□□□□ -0.89
VAPB-201ENST00000265619 ETNK1Q9HBU6 452 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 NMRK1Q9NWW6 199 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 HSFX1Q9UBD0 423 aa9.52□□□□□ -0.89
VAPB-201ENST00000265619 DBR1Q9UK59 544 aaKnown RBP9.52□□□□□ -0.89
VAPB-201ENST00000265619 TCP11X1B4DZS4 312 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 BHMG1C9JSJ3 638 aaPredicted RBP9.51□□□□□ -0.89
VAPB-201ENST00000265619 KCNK3O14649 394 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 RPS8P62241 208 aaKnown RBP9.51□□□□□ -0.89
VAPB-201ENST00000265619 LACTBP83111 547 aaPredicted RBP9.51□□□□□ -0.89
VAPB-201ENST00000265619 DBN1Q16643 649 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 CAVIN4Q5BKX8 364 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 TMEM67Q5HYA8 995 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 ANKRD40Q6AI12 368 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 LMNTD2Q8IXW0 634 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 STAG2Q8N3U4 1231 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 FAM13CQ8NE31 585 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 ASAP3Q8TDY4 903 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 EPS8L3Q8TE67 593 aaKnown RBP9.51□□□□□ -0.89
VAPB-201ENST00000265619 CENPTQ96BT3 561 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 CNOT6LQ96LI5 555 aaKnown RBP9.51□□□□□ -0.89
VAPB-201ENST00000265619 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.51□□□□□ -0.892e-6■■■■■ 124.7
VAPB-201ENST00000265619 INTS9Q9NV88 658 aaKnown RBP9.51□□□□□ -0.89
VAPB-201ENST00000265619 CHD4Q14839 1912 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 LAMB4A4D0S4 1761 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 GRID2IPA4D2P6 1211 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 TRIM75PA6NK02 468 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 G3V3G9 751 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 ZNF189O75820 626 aaPredicted RBP9.51□□□□□ -0.89
VAPB-201ENST00000265619 LCA5LO95447 670 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 RXRBP28702 533 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 PLOD1Q02809 727 aaPredicted RBP9.51□□□□□ -0.89
VAPB-201ENST00000265619 PTGDRQ13258 359 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 CNPY1Q3B7I2 92 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 DCAF8Q5TAQ9 597 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 MEI1Q5TIA1 1274 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 STK32AQ8WU08 396 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 SDR42E1Q8WUS8 393 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 DNAJC9Q8WXX5 260 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 AZIN2Q96A70 460 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 OPTNQ96CV9 577 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 NOX5Q96PH1 765 aa9.51□□□□□ -0.89
VAPB-201ENST00000265619 USP15Q9Y4E8 981 aaPredicted RBP9.51□□□□□ -0.89
VAPB-201ENST00000265619 GLI3P10071 1580 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms