RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 SPATA24Q86W54 205 aa15.11■□□□□ 0.01
CDH3-201ENST00000264012 RHOT2Q8IXI1 618 aa15.11■□□□□ 0.01
CDH3-201ENST00000264012 NBPF3Q9H094 633 aa15.11■□□□□ 0.01
CDH3-201ENST00000264012 SENP2Q9HC62 589 aa15.11■□□□□ 0.01
CDH3-201ENST00000264012 A0A0G2JLW4 131 aa15.11■□□□□ 0.01
CDH3-201ENST00000264012 CCDC160A6NGH7 325 aa15.11■□□□□ 0.01
CDH3-201ENST00000264012 EIF3CLB5ME19 914 aaKnown RBP15.11■□□□□ 0.01
CDH3-201ENST00000264012 SEMA3FQ13275 785 aa15.11■□□□□ 0.01
CDH3-201ENST00000264012 TCP11Q8WWU5 503 aa15.11■□□□□ 0.01
CDH3-201ENST00000264012 FAM167AQ96KS9 214 aa15.11■□□□□ 0.01
CDH3-201ENST00000264012 EIF3CQ99613 913 aaKnown RBP15.11■□□□□ 0.01
CDH3-201ENST00000264012 POC1B-GALNT4F8VUJ3 575 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 SFNP31947 248 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 CLCN6P51797 869 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 CLEC10AQ8IUN9 316 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 LXNQ9BS40 222 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 SEL1LQ9UBV2 794 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 CNTNAP4Q9C0A0 1308 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 LRRD1A4D1F6 860 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 FCER1AP12319 257 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 DHX9Q08211 1270 aaKnown RBP15.1■□□□□ 0.01
CDH3-201ENST00000264012 RSRC2Q7L4I2 434 aaKnown RBP15.1■□□□□ 0.01
CDH3-201ENST00000264012 LDHDQ86WU2 507 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 APOBEC3FQ8IUX4 373 aaKnown RBP15.1■□□□□ 0.01
CDH3-201ENST00000264012 ABI1Q8IZP0 508 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 CCSER1Q9C0I3 900 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 FAM49AQ9H0Q0 323 aaPredicted RBP15.1■□□□□ 0.01
CDH3-201ENST00000264012 TTC26A0AVF1 554 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 CLDN3O15551 220 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 ITKQ08881 620 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 NAALADL2Q58DX5 795 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 OR6B2Q6IFH4 312 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 RSRC1Q96IZ7 334 aaKnown RBP15.1■□□□□ 0.01
CDH3-201ENST00000264012 AP1M1Q9BXS5 423 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 CALN1Q9BXU9 219 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 LPXNO60711 386 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 FDPSP14324 419 aaKnown RBP15.1■□□□□ 0.01
CDH3-201ENST00000264012 DYNLT1P63172 113 aa15.1■□□□□ 0.01
CDH3-201ENST00000264012 EIF2AK1Q9BQI3 630 aaKnown RBP15.1■□□□□ 0.01
CDH3-201ENST00000264012 PREX1Q8TCU6 1659 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 PDIA5Q14554 519 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 KCNB1Q14721 858 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 GIMAP8Q8ND71 665 aaPredicted RBP15.09■□□□□ 0.01
CDH3-201ENST00000264012 PFDN4Q9NQP4 134 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 WDR70Q9NW82 654 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 DENND3A2RUS2 1198 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 RASA1P20936 1047 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 CYP4F22Q6NT55 531 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 KIAA1586Q9HCI6 787 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 RIMBP3CA6NJZ7 1639 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 RIMBP3BA6NNM3 1639 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 RIMBP3Q9UFD9 1639 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 MCF2LO15068 1137 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 MAPK6Q16659 721 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 TTC19Q6DKK2 380 aaPredicted RBP15.09■□□□□ 0.01
CDH3-201ENST00000264012 CDC42EP5Q6NZY7 148 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 TRIM9Q9C026 710 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 GABBR1Q9UBS5 961 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 ANAPC5Q9UJX4 755 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 A0A1B0GUA9 196 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 FDX1P10109 184 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 SLC7A5Q01650 507 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 CEP55Q53EZ4 464 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 SWSAP1Q6NVH7 229 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 C16orf86Q6ZW13 317 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 HEXIM2Q96MH2 286 aaKnown RBP15.09■□□□□ 0.01
CDH3-201ENST00000264012 ZNRF3Q9ULT6 936 aa15.09■□□□□ 0.01
CDH3-201ENST00000264012 PALMO75781 387 aa15.08■□□□□ 0.01
CDH3-201ENST00000264012 NDUFB10O96000 172 aa15.08■□□□□ 0.01
CDH3-201ENST00000264012 ZSCAN20P17040 1043 aaPredicted RBP15.08■□□□□ 0.01
CDH3-201ENST00000264012 HHIPL2Q6UWX4 724 aa15.08■□□□□ 0.01
CDH3-201ENST00000264012 ZNF710Q8N1W2 664 aa15.08■□□□□ 0.01
CDH3-201ENST00000264012 PPP4R1Q8TF05 950 aa15.08■□□□□ 0.01
CDH3-201ENST00000264012 CDKL2Q92772 493 aa15.08■□□□□ 0.01
CDH3-201ENST00000264012 SLC38A10Q9HBR0 1119 aa15.08■□□□□ 0.01
CDH3-201ENST00000264012 LRRC4Q9HBW1 653 aa15.08■□□□□ 0.01
CDH3-201ENST00000264012 INTS9Q9NV88 658 aaKnown RBP15.08■□□□□ 0.01
CDH3-201ENST00000264012 CTDNEP1O95476 244 aa15.08■□□□□ 0
CDH3-201ENST00000264012 RASSF2P50749 326 aa15.08■□□□□ 0
CDH3-201ENST00000264012 TPD52P55327 224 aaPredicted RBP15.08■□□□□ 0
CDH3-201ENST00000264012 PSMC5P62195 406 aa15.08■□□□□ 0
CDH3-201ENST00000264012 ZNF667Q5HYK9 610 aa15.08■□□□□ 0
CDH3-201ENST00000264012 METTL23Q86XA0 190 aa15.08■□□□□ 0
CDH3-201ENST00000264012 KSR1Q8IVT5 923 aa15.08■□□□□ 0
CDH3-201ENST00000264012 DNAJC5Q9H3Z4 198 aa15.08■□□□□ 0
CDH3-201ENST00000264012 FAN1Q9Y2M0 1017 aa15.08■□□□□ 0
CDH3-201ENST00000264012 SH3BP5O60239 455 aa15.08■□□□□ 0
CDH3-201ENST00000264012 INHBAP08476 426 aa15.08■□□□□ 0
CDH3-201ENST00000264012 IFNAR2P48551 515 aa15.08■□□□□ 0
CDH3-201ENST00000264012 RWDD2BP57060 319 aa15.08■□□□□ 0
CDH3-201ENST00000264012 CATSPER4Q7RTX7 472 aa15.08■□□□□ 0
CDH3-201ENST00000264012 ACAD9Q9H845 621 aa15.08■□□□□ 0
CDH3-201ENST00000264012 ADGRG1Q9Y653 693 aa15.08■□□□□ 0
CDH3-201ENST00000264012 FGGP02679 453 aa15.07■□□□□ 0
CDH3-201ENST00000264012 ERICH1Q86X53 443 aa15.07■□□□□ 0
CDH3-201ENST00000264012 ZNF526Q8TF50 670 aaPredicted RBP15.07■□□□□ 0
CDH3-201ENST00000264012 FAM213AQ9BRX8 229 aa15.07■□□□□ 0
CDH3-201ENST00000264012 OATP04181 439 aa15.07■□□□□ 0
CDH3-201ENST00000264012 DR1Q01658 176 aa15.07■□□□□ 0
CDH3-201ENST00000264012 GFPT1Q06210 699 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms