RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 IPO5O00410 1097 aaKnown RBP17.76■□□□□ 0.43
CTCF-201ENST00000264010 OPA1O60313 960 aa17.76■□□□□ 0.43
CTCF-201ENST00000264010 RNASE9P60153 205 aaKnown RBP17.76■□□□□ 0.43
CTCF-201ENST00000264010 C2orf54Q08AI8 447 aa17.76■□□□□ 0.43
CTCF-201ENST00000264010 GIT2Q14161 759 aa17.76■□□□□ 0.43
CTCF-201ENST00000264010 HYIQ5T013 277 aa17.76■□□□□ 0.43
CTCF-201ENST00000264010 TRAPPC11Q7Z392 1133 aa17.76■□□□□ 0.43
CTCF-201ENST00000264010 IFT81Q8WYA0 676 aa17.76■□□□□ 0.43
CTCF-201ENST00000264010 BICD1Q96G01 975 aa17.76■□□□□ 0.43
CTCF-201ENST00000264010 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.76■□□□□ 0.43
CTCF-201ENST00000264010 HGSO14964 777 aaPredicted RBP17.75■□□□□ 0.43
CTCF-201ENST00000264010 DKC1O60832 514 aaKnown RBP eCLIP17.75■□□□□ 0.43
CTCF-201ENST00000264010 BCRP11274 1271 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 DCAF15Q66K64 600 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 MICALCLQ6ZW33 695 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 SYN2Q92777 582 aaPredicted RBP17.75■□□□□ 0.43
CTCF-201ENST00000264010 FHOD1Q9Y613 1164 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 ZNF831Q5JPB2 1677 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 MYBP10242 640 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 CXCR5P32302 372 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 EHHADHQ08426 723 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 SHROOM1Q2M3G4 852 aaPredicted RBP17.75■□□□□ 0.43
CTCF-201ENST00000264010 ARHGEF16Q5VV41 709 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 FOXR2Q6PJQ5 311 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 SND1Q7KZF4 910 aaKnown RBP eCLIP17.75■□□□□ 0.43
CTCF-201ENST00000264010 SYCE1Q8N0S2 351 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 MMS19Q96T76 1030 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 CXorf56Q9H5V9 222 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 SNX12Q9UMY4 172 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 SIK3Q9Y2K2 1263 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 CEP104O60308 925 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 CASP8Q14790 479 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 LRRC55Q6ZSA7 311 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 NLRX1Q86UT6 975 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 TMEM39BQ9GZU3 492 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 ARHGAP20Q9P2F6 1191 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 SUFUQ9UMX1 484 aa17.75■□□□□ 0.43
CTCF-201ENST00000264010 FAM86B1E9PN63 330 aa17.74■□□□□ 0.43
CTCF-201ENST00000264010 FAM86B2P0C5J1 330 aa17.74■□□□□ 0.43
CTCF-201ENST00000264010 VSNL1P62760 191 aa17.74■□□□□ 0.43
CTCF-201ENST00000264010 ECM1Q16610 540 aa17.74■□□□□ 0.43
CTCF-201ENST00000264010 ARHGAP44Q17R89 818 aa17.74■□□□□ 0.43
CTCF-201ENST00000264010 PEX26Q7Z412 305 aa17.74■□□□□ 0.43
CTCF-201ENST00000264010 GLIS3Q8NEA6 775 aa17.74■□□□□ 0.43
CTCF-201ENST00000264010 TESPA1A2RU30 521 aaPredicted RBP17.74■□□□□ 0.43
CTCF-201ENST00000264010 SH3BP5LQ7L8J4 393 aa17.74■□□□□ 0.43
CTCF-201ENST00000264010 AFAP1L1Q8TED9 768 aa17.74■□□□□ 0.43
CTCF-201ENST00000264010 AS3MTQ9HBK9 375 aa17.74■□□□□ 0.43
CTCF-201ENST00000264010 TNRC6CQ9HCJ0 1690 aaKnown RBP17.74■□□□□ 0.43
CTCF-201ENST00000264010 SLC16A3O15427 465 aaKnown RBP17.74■□□□□ 0.43
CTCF-201ENST00000264010 N4BP1O75113 896 aaKnown RBP17.74■□□□□ 0.43
CTCF-201ENST00000264010 EZH2Q15910 746 aaKnown RBP17.74■□□□□ 0.43
CTCF-201ENST00000264010 PAPD7Q5XG87 772 aaKnown RBP17.74■□□□□ 0.43
CTCF-201ENST00000264010 TRIM59Q8IWR1 403 aa17.74■□□□□ 0.43
CTCF-201ENST00000264010 NOA1Q8NC60 698 aaKnown RBP17.74■□□□□ 0.43
CTCF-201ENST00000264010 TACO1Q9BSH4 297 aaKnown RBP17.74■□□□□ 0.43
CTCF-201ENST00000264010 MED4Q9NPJ6 270 aa17.74■□□□□ 0.43
CTCF-201ENST00000264010 PIM2Q9P1W9 311 aa17.74■□□□□ 0.43
CTCF-201ENST00000264010 ZMYND10O75800 440 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 PSMC6P62333 389 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 BTNL9Q6UXG8 535 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 MAATS1Q7Z4T9 603 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 LRRC15Q8TF66 581 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 N4BP2L2Q92802 583 aaPredicted RBP17.73■□□□□ 0.43
CTCF-201ENST00000264010 OSBPL9Q96SU4 736 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 ADAM21Q9UKJ8 722 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 FTCDO95954 541 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 CIITAP33076 1130 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 MYL7Q01449 175 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 XKR9Q5GH70 373 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 ALKBH5Q6P6C2 394 aaKnown RBP17.73■□□□□ 0.43
CTCF-201ENST00000264010 MSANTD4Q8NCY6 345 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 AGBL3Q8NEM8 1001 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 HNRNPLLQ8WVV9 542 aaKnown RBP17.73■□□□□ 0.43
CTCF-201ENST00000264010 ACCSQ96QU6 501 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 TMEM206Q9H813 350 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 KCNK3O14649 394 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 TAL1P17542 331 aaPredicted RBP17.73■□□□□ 0.43
CTCF-201ENST00000264010 NMT1P30419 496 aaKnown RBP17.73■□□□□ 0.43
CTCF-201ENST00000264010 SLC12A3P55017 1021 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 LXNQ9BS40 222 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 ZNF446Q9NWS9 450 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 FAN1Q9Y2M0 1017 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 DUSP10Q9Y6W6 482 aa17.73■□□□□ 0.43
CTCF-201ENST00000264010 SP4Q02446 784 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 FAM71BQ8TC56 605 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 REXO2Q9Y3B8 237 aaKnown RBP17.72■□□□□ 0.43
CTCF-201ENST00000264010 LAMB1P07942 1786 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 GOLGA6BA6NDN3 693 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 BACH1O14867 736 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 PAK2Q13177 524 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 ALCAMQ13740 583 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 SLC18A3Q16572 532 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 DALRD3Q5D0E6 543 aaKnown RBP17.72■□□□□ 0.43
CTCF-201ENST00000264010 RINT1Q6NUQ1 792 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 CYP2W1Q8TAV3 490 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 RUSC1Q9BVN2 902 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 TAOK3Q9H2K8 898 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 TBC1D8O95759 1140 aa17.72■□□□□ 0.43
CTCF-201ENST00000264010 P4HBP07237 508 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms