RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 TRMT10CQ7L0Y3 403 aaKnown RBP18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 TRIM55Q9BYV6 548 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 HMGB3O15347 200 aaKnown RBP18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 GOLGA8FQ08AF8 430 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 GOLGA8DPQ0D2H9 430 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 DOK7Q18PE1 504 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 NUGGCQ68CJ6 796 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 GRAMD1CQ8IYS0 662 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 PARD3BQ8TEW8 1205 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 AP5M1Q9H0R1 490 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 SLAIN2Q9P270 581 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 PI4KBQ9UBF8 816 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 POTEB3A0JP26 581 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 WDR91A4D1P6 747 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 ADCY1Q08828 1119 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 POTEBQ6S5H4 581 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 RASGRP4Q8TDF6 673 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 GIMAP4Q9NUV9 329 aa18.72■□□□□ 0.59
NOTCH3-201ENST00000263388 ZBBXA8MT70 800 aa18.71■□□□□ 0.59
NOTCH3-201ENST00000263388 FGGP02679 453 aa18.71■□□□□ 0.59
NOTCH3-201ENST00000263388 OCA2Q04671 838 aa18.71■□□□□ 0.59
NOTCH3-201ENST00000263388 ABHD10Q9NUJ1 306 aa18.71■□□□□ 0.59
NOTCH3-201ENST00000263388 MFAP3LO75121 409 aa18.71■□□□□ 0.59
NOTCH3-201ENST00000263388 RBM41Q96IZ5 413 aaKnown RBP18.71■□□□□ 0.59
NOTCH3-201ENST00000263388 AP1M1Q9BXS5 423 aa18.71■□□□□ 0.59
NOTCH3-201ENST00000263388 MAGI2Q86UL8 1455 aa18.71■□□□□ 0.59
NOTCH3-201ENST00000263388 FRA10AC1Q70Z53 315 aa18.71■□□□□ 0.59
NOTCH3-201ENST00000263388 ZNF579Q8NAF0 562 aaKnown RBP18.71■□□□□ 0.59
NOTCH3-201ENST00000263388 ANXA13P27216 316 aa18.71■□□□□ 0.59
NOTCH3-201ENST00000263388 MDM2Q00987 491 aaPredicted RBP18.71■□□□□ 0.59
NOTCH3-201ENST00000263388 CYP26B1Q9NR63 512 aa18.71■□□□□ 0.59
NOTCH3-201ENST00000263388 PLAAQ9Y263 795 aa18.71■□□□□ 0.59
NOTCH3-201ENST00000263388 EFCAB14O75071 495 aa18.71■□□□□ 0.59
NOTCH3-201ENST00000263388 FIS1Q9Y3D6 152 aa18.71■□□□□ 0.59
NOTCH3-201ENST00000263388 ZSCAN20P17040 1043 aaPredicted RBP18.71■□□□□ 0.59
NOTCH3-201ENST00000263388 OSBPP22059 807 aa18.71■□□□□ 0.59
NOTCH3-201ENST00000263388 LRRC41Q15345 812 aa18.71■□□□□ 0.59
NOTCH3-201ENST00000263388 SUN2Q9UH99 717 aa18.71■□□□□ 0.59
NOTCH3-201ENST00000263388 NEK2P51955 445 aa18.71■□□□□ 0.58
NOTCH3-201ENST00000263388 C7orf31Q8N865 590 aa18.71■□□□□ 0.58
NOTCH3-201ENST00000263388 GLI2P10070 1586 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 MIF4GDA9UHW6 222 aaKnown RBP18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 K7ERI5 159 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 SERPINI2O75830 405 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 HIBCHQ6NVY1 386 aaPredicted RBP18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 RUBCNQ92622 972 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 ZSWIM5Q9P217 1185 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 NXF1Q9UBU9 619 aaKnown RBP18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 REREQ9P2R6 1566 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 SATB2Q9UPW6 733 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 SYCE1LA8MT33 242 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 RASA4BC9J798 803 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 RASA4O43374 803 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 USP6NLQ92738 828 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 BCORL1Q5H9F3 1711 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 TMEM2Q9UHN6 1383 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 LDHAP00338 332 aaKnown RBP18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 PYGBP11216 843 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 TMED8Q6PL24 325 aaPredicted RBP18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 APOBEC2Q9Y235 224 aaKnown RBP18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 PTCH1Q13635 1447 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 LOC102724428A0A0B4J2F2 783 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 APBA3O96018 575 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 SIK1P57059 783 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 SARM1Q6SZW1 724 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 ACAD11Q709F0 780 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 TTC13Q8NBP0 860 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 PCIF1Q9H4Z3 704 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 CRKLP46109 303 aaKnown RBP18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 MB21D1Q8N884 522 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 SYT2Q8N9I0 419 aaPredicted RBP18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 STRIP2Q9ULQ0 834 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 FLOT2Q14254 428 aa18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 GIMAP8Q8ND71 665 aaPredicted RBP18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 HEXIM2Q96MH2 286 aaKnown RBP18.7■□□□□ 0.58
NOTCH3-201ENST00000263388 ARL4CP56559 192 aa18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 NLRP1Q9C000 1473 aa18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 IFNA8P32881 189 aa18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 POLE2P56282 527 aa18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 AP2B1P63010 937 aa18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 FBXO38Q6PIJ6 1188 aa18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 CEP72Q9P209 647 aa18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 SLC4A1P02730 911 aa18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 NOP14P78316 857 aaKnown RBP18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 YWHAHQ04917 246 aaPredicted RBP18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 ZNF18P17022 549 aa18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 COPG1Q9Y678 874 aaKnown RBP18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 KRT38O76015 456 aa18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 MORF4L2Q15014 288 aa18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 SUPT20HL1Q3ZLR7 823 aa18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 ALKBH5Q6P6C2 394 aaKnown RBP18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 UNC5CLQ8IV45 518 aa18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 NDUFAF2Q8N183 169 aa18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 HSPH1Q92598 858 aa18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 ZBTB18Q99592 522 aa18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 KDM6BO15054 1643 aa18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 SPATA31E1Q6ZUB1 1445 aa18.69■□□□□ 0.58
NOTCH3-201ENST00000263388 COPEO14579 308 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms