RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 TOX2Q96NM4 488 aa18.57■□□□□ 0.56
CHCHD3-201ENST00000262570 CEP89Q96ST8 783 aa18.57■□□□□ 0.56
CHCHD3-201ENST00000262570 SH2D3AQ9BRG2 576 aa18.57■□□□□ 0.56
CHCHD3-201ENST00000262570 A0A1W2PQ27 194 aa18.56■□□□□ 0.56
CHCHD3-201ENST00000262570 A0A1W2PQ64 194 aa18.56■□□□□ 0.56
CHCHD3-201ENST00000262570 A0A1W2PQD8 194 aa18.56■□□□□ 0.56
CHCHD3-201ENST00000262570 MBLAC1A4D2B0 266 aaPredicted RBP18.56■□□□□ 0.56
CHCHD3-201ENST00000262570 RARRES1P49788 294 aa18.56■□□□□ 0.56
CHCHD3-201ENST00000262570 IGBP1P78318 339 aa18.56■□□□□ 0.56
CHCHD3-201ENST00000262570 ZNF200P98182 395 aaPredicted RBP18.56■□□□□ 0.56
CHCHD3-201ENST00000262570 TRIM60Q495X7 471 aa18.56■□□□□ 0.56
CHCHD3-201ENST00000262570 MTERF2Q49AM1 385 aa18.56■□□□□ 0.56
CHCHD3-201ENST00000262570 FAM126BQ8IXS8 530 aa18.56■□□□□ 0.56
CHCHD3-201ENST00000262570 CEP170P1Q96L14 293 aa18.56■□□□□ 0.56
CHCHD3-201ENST00000262570 CTAGE1Q96RT6 745 aa18.56■□□□□ 0.56
CHCHD3-201ENST00000262570 PLIN2Q99541 437 aa18.56■□□□□ 0.56
CHCHD3-201ENST00000262570 CYP26B1Q9NR63 512 aa18.56■□□□□ 0.56
CHCHD3-201ENST00000262570 TRMT13Q9NUP7 481 aaKnown RBP18.56■□□□□ 0.56
CHCHD3-201ENST00000262570 CCDC39Q9UFE4 941 aa18.56■□□□□ 0.56
CHCHD3-201ENST00000262570 DBR1Q9UK59 544 aaKnown RBP18.56■□□□□ 0.56
CHCHD3-201ENST00000262570 DNM3Q9UQ16 869 aa18.56■□□□□ 0.56
CHCHD3-201ENST00000262570 A0A087X0B3 334 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 E9PMD0 336 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 TREHO43280 583 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 B4GALT4O60513 344 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 PQBP1O60828 265 aaKnown RBP18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 CD4P01730 458 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 PLCG1P19174 1290 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 RTP1P59025 263 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 PTGISQ16647 500 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 XKR9Q5GH70 373 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 RASSF8Q8NHQ8 419 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 TRPV6Q9H1D0 765 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 PPME1Q9Y570 386 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 EYA4O95677 639 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 KLRC1P26715 233 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 TLE2Q04725 743 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 MTHFD1LQ6UB35 978 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 LRRC15Q8TF66 581 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 PANK2Q9BZ23 570 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 BLOC1S4Q9NUP1 217 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 FAM13BQ9NYF5 915 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 TUBE1Q9UJT0 475 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 ATP11BQ9Y2G3 1177 aa18.55■□□□□ 0.56
CHCHD3-201ENST00000262570 DCDC2CA8MYV0 355 aa18.54■□□□□ 0.56
CHCHD3-201ENST00000262570 C22orf31O95567 290 aa18.54■□□□□ 0.56
CHCHD3-201ENST00000262570 NAALADL2Q58DX5 795 aa18.54■□□□□ 0.56
CHCHD3-201ENST00000262570 RRAGBQ5VZM2 374 aa18.54■□□□□ 0.56
CHCHD3-201ENST00000262570 CCDC73Q6ZRK6 1079 aa18.54■□□□□ 0.56
CHCHD3-201ENST00000262570 SERINC5Q86VE9 423 aa18.54■□□□□ 0.56
CHCHD3-201ENST00000262570 PDILTQ8N807 584 aa18.54■□□□□ 0.56
CHCHD3-201ENST00000262570 ZBTB10Q96DT7 871 aa18.54■□□□□ 0.56
CHCHD3-201ENST00000262570 BHMT2Q9H2M3 363 aa18.54■□□□□ 0.56
CHCHD3-201ENST00000262570 HPSEQ9Y251 543 aa18.54■□□□□ 0.56
CHCHD3-201ENST00000262570 FAM237AA0A1B0GTK4 181 aa18.53■□□□□ 0.56
CHCHD3-201ENST00000262570 A0A1B0GVL5 298 aa18.53■□□□□ 0.56
CHCHD3-201ENST00000262570 GOLGA6L4A6NEF3 574 aa18.53■□□□□ 0.56
CHCHD3-201ENST00000262570 MAGEB2O15479 319 aa18.53■□□□□ 0.56
CHCHD3-201ENST00000262570 MAFO75444 373 aaPredicted RBP18.53■□□□□ 0.56
CHCHD3-201ENST00000262570 TBC1D8BQ0IIM8 1120 aa18.53■□□□□ 0.56
CHCHD3-201ENST00000262570 FAAP100Q0VG06 881 aa18.53■□□□□ 0.56
CHCHD3-201ENST00000262570 GBP4Q96PP9 640 aa18.53■□□□□ 0.56
CHCHD3-201ENST00000262570 HTATIP2Q9BUP3 242 aa18.53■□□□□ 0.56
CHCHD3-201ENST00000262570 DHX33Q9H6R0 707 aaKnown RBP18.53■□□□□ 0.56
CHCHD3-201ENST00000262570 KCNH3Q9ULD8 1083 aa18.53■□□□□ 0.56
CHCHD3-201ENST00000262570 PCDHA2Q9Y5H9 948 aa18.53■□□□□ 0.56
CHCHD3-201ENST00000262570 IGKV6-21A0A0C4DH24 114 aa18.52■□□□□ 0.56
CHCHD3-201ENST00000262570 TLR3O15455 904 aaKnown RBP18.52■□□□□ 0.56
CHCHD3-201ENST00000262570 PFKFB1P16118 471 aa18.52■□□□□ 0.56
CHCHD3-201ENST00000262570 E2F4Q16254 413 aa18.52■□□□□ 0.56
CHCHD3-201ENST00000262570 EXOC8Q8IYI6 725 aa18.52■□□□□ 0.56
CHCHD3-201ENST00000262570 SYT2Q8N9I0 419 aaPredicted RBP18.52■□□□□ 0.56
CHCHD3-201ENST00000262570 MRPS27Q92552 414 aaKnown RBP18.52■□□□□ 0.56
CHCHD3-201ENST00000262570 RAD54LQ92698 747 aa18.52■□□□□ 0.56
CHCHD3-201ENST00000262570 CCDC43Q96MW1 224 aaKnown RBP18.52■□□□□ 0.56
CHCHD3-201ENST00000262570 PDLIM7Q9NR12 457 aa18.52■□□□□ 0.56
CHCHD3-201ENST00000262570 STK17AQ9UEE5 414 aa18.52■□□□□ 0.56
CHCHD3-201ENST00000262570 NOD1Q9Y239 953 aa18.52■□□□□ 0.56
CHCHD3-201ENST00000262570 ARHGEF35A5YM69 484 aa18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 POLR2DO15514 142 aaKnown RBP18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 GADD45BO75293 160 aaPredicted RBP18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 DGAT1O75907 488 aa18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 PLA2G4BP0C869 781 aa18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 CYP2C9P11712 490 aa18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 RFC5P40937 340 aa18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 PTK7Q13308 1070 aa18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 TPRNQ4KMQ1 711 aa18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 TAF2Q6P1X5 1199 aa18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 FSIP1Q8NA03 581 aa18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 IQUBQ8NA54 791 aa18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 SLC7A3Q8WY07 619 aa18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 LARP4BQ92615 738 aaKnown RBP18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 GOLPH3LQ9H4A5 285 aa18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 KAT6AQ92794 2004 aa18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 SMIM35A0A1B0GVV1 85 aa18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 PRPF40AO75400 957 aaKnown RBP18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 STAT6P42226 847 aa18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 NDUFA8P51970 172 aa18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 POLGP54098 1239 aaPredicted RBP18.51■□□□□ 0.55
CHCHD3-201ENST00000262570 SLC12A3P55017 1021 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms