RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 RNF26Q9BY78 433 aaPredicted RBP15.09■□□□□ 0.01
SGCA-201ENST00000262018 GDPD2Q9HCC8 539 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 COL20A1Q9P218 1284 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 PCDHGC5Q9Y5F6 944 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 MYO15AQ9UKN7 3530 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 EIF3JO75822 258 aaKnown RBP15.09■□□□□ 0.01
SGCA-201ENST00000262018 SMIM10L2AP0DMW4 78 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 SMIM10L2BP0DMW5 78 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 NCLP19338 710 aaKnown RBP15.09■□□□□ 0.01
SGCA-201ENST00000262018 EIF2AK2P19525 551 aaKnown RBP15.09■□□□□ 0.01
SGCA-201ENST00000262018 RBM10P98175 930 aaKnown RBP15.09■□□□□ 0.01
SGCA-201ENST00000262018 GUCY1B3Q02153 619 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 ZNF543Q08ER8 600 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 HSDL1Q3SXM5 330 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 ASPRV1Q53RT3 343 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 ARHGEF16Q5VV41 709 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 FAM173BQ6P4H8 233 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 TMTC3Q6ZXV5 915 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 KREMEN2Q8NCW0 462 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 CTCFLQ8NI51 663 aaPredicted RBP15.09■□□□□ 0.01
SGCA-201ENST00000262018 POF1BQ8WVV4 589 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 SUSD6Q92537 303 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 ZNF689Q96CS4 500 aaPredicted RBP15.09■□□□□ 0.01
SGCA-201ENST00000262018 C16orf70Q9BSU1 422 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 RNPEPQ9H4A4 650 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 TLE6Q9H808 572 aa15.09■□□□□ 0.01
SGCA-201ENST00000262018 MRPL42Q9Y6G3 142 aaKnown RBP15.09■□□□□ 0.01
SGCA-201ENST00000262018 CACNA1GO43497 2377 aa15.08■□□□□ 0.01
SGCA-201ENST00000262018 NCOR2Q9Y618 2525 aa15.08■□□□□ 0
SGCA-201ENST00000262018 PER2O15055 1255 aa15.08■□□□□ 0
SGCA-201ENST00000262018 PRPF3O43395 683 aaKnown RBP15.08■□□□□ 0
SGCA-201ENST00000262018 FIBPO43427 364 aa15.08■□□□□ 0
SGCA-201ENST00000262018 GADD45BO75293 160 aaPredicted RBP15.08■□□□□ 0
SGCA-201ENST00000262018 PARP1P09874 1014 aaKnown RBP15.08■□□□□ 0
SGCA-201ENST00000262018 NAALADL2Q58DX5 795 aa15.08■□□□□ 0
SGCA-201ENST00000262018 MYSM1Q5VVJ2 828 aa15.08■□□□□ 0
SGCA-201ENST00000262018 KLHL23Q8NBE8 558 aa15.08■□□□□ 0
SGCA-201ENST00000262018 AIFM3Q96NN9 605 aa15.08■□□□□ 0
SGCA-201ENST00000262018 SCAND2PQ9GZW5 306 aaPredicted RBP15.08■□□□□ 0
SGCA-201ENST00000262018 KIAA1217Q5T5P2 1943 aa15.08■□□□□ 0
SGCA-201ENST00000262018 MYH7BA7E2Y1 1941 aa15.07■□□□□ 0
SGCA-201ENST00000262018 H3BRB1 525 aa15.07■□□□□ 0
SGCA-201ENST00000262018 ENPP3O14638 875 aa15.07■□□□□ 0
SGCA-201ENST00000262018 PLEKHA8P1O95397 391 aa15.07■□□□□ 0
SGCA-201ENST00000262018 GGPS1O95749 300 aa15.07■□□□□ 0
SGCA-201ENST00000262018 NR3C2P08235 984 aa15.07■□□□□ 0
SGCA-201ENST00000262018 GHRP10912 638 aa15.07■□□□□ 0
SGCA-201ENST00000262018 HOXC8P31273 242 aa15.07■□□□□ 0
SGCA-201ENST00000262018 KIF5BP33176 963 aa15.07■□□□□ 0
SGCA-201ENST00000262018 UBE2HP62256 183 aa15.07■□□□□ 0
SGCA-201ENST00000262018 GRM4Q14833 912 aa15.07■□□□□ 0
SGCA-201ENST00000262018 CELF3Q5SZQ8 465 aaKnown RBP15.07■□□□□ 0
SGCA-201ENST00000262018 L1TD1Q5T7N2 865 aaKnown RBP15.07■□□□□ 0
SGCA-201ENST00000262018 BRAPQ7Z569 592 aa15.07■□□□□ 0
SGCA-201ENST00000262018 MICAL1Q8TDZ2 1067 aa15.07■□□□□ 0
SGCA-201ENST00000262018 ZNF396Q96N95 335 aaPredicted RBP15.07■□□□□ 0
SGCA-201ENST00000262018 CNTNAP3BQ96NU0 1288 aa15.07■□□□□ 0
SGCA-201ENST00000262018 CNTNAP3Q9BZ76 1288 aa15.07■□□□□ 0
SGCA-201ENST00000262018 TUT1Q9H6E5 874 aaKnown RBP15.07■□□□□ 0
SGCA-201ENST00000262018 CFAP45Q9UL16 551 aa15.07■□□□□ 0
SGCA-201ENST00000262018 EP300Q09472 2414 aaPredicted RBP15.06■□□□□ 0
SGCA-201ENST00000262018 DGKIO75912 1065 aa15.06■□□□□ 0
SGCA-201ENST00000262018 TRIM29Q14134 588 aa15.06■□□□□ 0
SGCA-201ENST00000262018 FAM26DQ5JW98 314 aa15.06■□□□□ 0
SGCA-201ENST00000262018 ASTLQ6HA08 431 aaPredicted RBP15.06■□□□□ 0
SGCA-201ENST00000262018 UBALD2Q8IYN6 164 aa15.06■□□□□ 0
SGCA-201ENST00000262018 LEO1Q8WVC0 666 aaPredicted RBP15.06■□□□□ 0
SGCA-201ENST00000262018 CNTNAP5Q8WYK1 1306 aa15.06■□□□□ 0
SGCA-201ENST00000262018 GJB4Q9NTQ9 266 aa15.06■□□□□ 0
SGCA-201ENST00000262018 SETD4Q9NVD3 440 aa15.06■□□□□ 0
SGCA-201ENST00000262018 PALM3A6NDB9 673 aaPredicted RBP15.05■□□□□ -0
SGCA-201ENST00000262018 GOLGA8HP0CJ92 632 aa15.05■□□□□ -0
SGCA-201ENST00000262018 GNAQP50148 359 aa15.05■□□□□ -0
SGCA-201ENST00000262018 AKAP17AQ02040 695 aaKnown RBP15.05■□□□□ -0
SGCA-201ENST00000262018 MTMR3Q13615 1198 aa15.05■□□□□ -0
SGCA-201ENST00000262018 PAN2Q504Q3 1202 aaKnown RBP15.05■□□□□ -0
SGCA-201ENST00000262018 CMTR1Q8N1G2 835 aaKnown RBP15.05■□□□□ -0
SGCA-201ENST00000262018 SRBD1Q8N5C6 995 aaKnown RBP15.05■□□□□ -0
SGCA-201ENST00000262018 VN1R2Q8NFZ6 395 aa15.05■□□□□ -0
SGCA-201ENST00000262018 KCNG4Q8TDN1 519 aa15.05■□□□□ -0
SGCA-201ENST00000262018 ATP8B4Q8TF62 1192 aa15.05■□□□□ -0
SGCA-201ENST00000262018 APOL5Q9BWW9 433 aa15.05■□□□□ -0
SGCA-201ENST00000262018 GZF1Q9H116 711 aaPredicted RBP15.05■□□□□ -0
SGCA-201ENST00000262018 MFSD1Q9H3U5 465 aa15.05■□□□□ -0
SGCA-201ENST00000262018 TFIP11Q9UBB9 837 aaKnown RBP15.05■□□□□ -0
SGCA-201ENST00000262018 MAD2L2Q9UI95 211 aa15.05■□□□□ -0
SGCA-201ENST00000262018 SORCS3Q9UPU3 1222 aa15.05■□□□□ -0
SGCA-201ENST00000262018 TPRP12270 2363 aaKnown RBP15.05■□□□□ -0
SGCA-201ENST00000262018 ABCB11O95342 1321 aa15.04■□□□□ -0
SGCA-201ENST00000262018 CHRNA1P02708 482 aa15.04■□□□□ -0
SGCA-201ENST00000262018 GNAT1P11488 350 aa15.04■□□□□ -0
SGCA-201ENST00000262018 MYCLP12524 364 aaPredicted RBP15.04■□□□□ -0
SGCA-201ENST00000262018 MCF2L2Q86YR7 1114 aa15.04■□□□□ -0
SGCA-201ENST00000262018 CMTR2Q8IYT2 770 aaKnown RBP15.04■□□□□ -0
SGCA-201ENST00000262018 CCDC82Q8N4S0 544 aa15.04■□□□□ -0
SGCA-201ENST00000262018 SPATA32Q96LK8 384 aa15.04■□□□□ -0
SGCA-201ENST00000262018 MAF1Q9H063 256 aa15.04■□□□□ -0
SGCA-201ENST00000262018 CPVLQ9H3G5 476 aa15.04■□□□□ -0
SGCA-201ENST00000262018 MLXIPQ9HAP2 919 aa15.04■□□□□ -0
SGCA-201ENST00000262018 PXMP2Q9NR77 195 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms