RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 CCDC90BQ9GZT6 254 aa15.32■□□□□ 0.04
CUX2-201ENST00000261726 SAYSD1Q9NPB0 183 aa15.32■□□□□ 0.04
CUX2-201ENST00000261726 CIITAP33076 1130 aa15.31■□□□□ 0.04
CUX2-201ENST00000261726 VCPP55072 806 aaKnown RBP15.31■□□□□ 0.04
CUX2-201ENST00000261726 NEMP1O14524 444 aa15.31■□□□□ 0.04
CUX2-201ENST00000261726 BMP3P12645 472 aa15.31■□□□□ 0.04
CUX2-201ENST00000261726 MECOMQ03112 1051 aa15.31■□□□□ 0.04
CUX2-201ENST00000261726 SMAD1Q15797 465 aaKnown RBP15.31■□□□□ 0.04
CUX2-201ENST00000261726 ING2Q9H160 280 aa15.31■□□□□ 0.04
CUX2-201ENST00000261726 PPARGC1AQ9UBK2 798 aaKnown RBP15.31■□□□□ 0.04
CUX2-201ENST00000261726 ABT1Q9ULW3 272 aaKnown RBP15.31■□□□□ 0.04
CUX2-201ENST00000261726 SFI1A8K8P3 1242 aa15.31■□□□□ 0.04
CUX2-201ENST00000261726 SEMA3EO15041 775 aa15.31■□□□□ 0.04
CUX2-201ENST00000261726 CDC25BP30305 580 aa15.31■□□□□ 0.04
CUX2-201ENST00000261726 HIBCHQ6NVY1 386 aaPredicted RBP15.31■□□□□ 0.04
CUX2-201ENST00000261726 TAGAPQ8N103 731 aa15.31■□□□□ 0.04
CUX2-201ENST00000261726 ENOX1Q8TC92 643 aaKnown RBP15.31■□□□□ 0.04
CUX2-201ENST00000261726 XDHP47989 1333 aa15.31■□□□□ 0.04
CUX2-201ENST00000261726 NR1D1P20393 614 aa15.31■□□□□ 0.04
CUX2-201ENST00000261726 FKBP3Q00688 224 aaKnown RBP15.31■□□□□ 0.04
CUX2-201ENST00000261726 USP17L2Q6R6M4 530 aa15.31■□□□□ 0.04
CUX2-201ENST00000261726 ARMC9Q7Z3E5 817 aa15.31■□□□□ 0.04
CUX2-201ENST00000261726 ZC3H18Q86VM9 953 aaKnown RBP15.31■□□□□ 0.04
CUX2-201ENST00000261726 KLHL8Q9P2G9 620 aaPredicted RBP15.31■□□□□ 0.04
CUX2-201ENST00000261726 ARHGEF37A1IGU5 675 aa15.31■□□□□ 0.04
CUX2-201ENST00000261726 PLA2G4BP0C869 781 aa15.31■□□□□ 0.04
CUX2-201ENST00000261726 NUGGCQ68CJ6 796 aa15.31■□□□□ 0.04
CUX2-201ENST00000261726 TBC1D1Q86TI0 1168 aaPredicted RBP15.31■□□□□ 0.04
CUX2-201ENST00000261726 SYT2Q8N9I0 419 aaPredicted RBP15.31■□□□□ 0.04
CUX2-201ENST00000261726 VPS39Q96JC1 886 aa15.31■□□□□ 0.04
CUX2-201ENST00000261726 KIFC3Q9BVG8 833 aa15.31■□□□□ 0.04
CUX2-201ENST00000261726 SAMSN1Q9NSI8 373 aaKnown RBP15.31■□□□□ 0.04
CUX2-201ENST00000261726 CREB3O43889 395 aa15.31■□□□□ 0.04
CUX2-201ENST00000261726 NKX1-1Q15270 411 aaPredicted RBP15.31■□□□□ 0.04
CUX2-201ENST00000261726 GRAMD4Q6IC98 578 aa15.31■□□□□ 0.04
CUX2-201ENST00000261726 AFF4Q9UHB7 1163 aaKnown RBP15.31■□□□□ 0.04
CUX2-201ENST00000261726 RECQLP46063 649 aaPredicted RBP15.3■□□□□ 0.04
CUX2-201ENST00000261726 PAPOLAP51003 745 aaKnown RBP15.3■□□□□ 0.04
CUX2-201ENST00000261726 PPP1R2P3Q6NXS1 205 aa15.3■□□□□ 0.04
CUX2-201ENST00000261726 PASD1Q8IV76 773 aa15.3■□□□□ 0.04
CUX2-201ENST00000261726 PDIK1LQ8N165 341 aa15.3■□□□□ 0.04
CUX2-201ENST00000261726 FBXO18Q8NFZ0 1043 aa15.3■□□□□ 0.04
CUX2-201ENST00000261726 CCDC17Q96LX7 622 aa15.3■□□□□ 0.04
CUX2-201ENST00000261726 NFX1Q12986 1120 aaKnown RBP15.3■□□□□ 0.04
CUX2-201ENST00000261726 SLC39A14Q15043 492 aa15.3■□□□□ 0.04
CUX2-201ENST00000261726 FLAD1Q8NFF5 587 aa15.3■□□□□ 0.04
CUX2-201ENST00000261726 TEKT4Q8WW24 435 aa15.3■□□□□ 0.04
CUX2-201ENST00000261726 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.3■□□□□ 0.04
CUX2-201ENST00000261726 PRDM5Q9NQX1 630 aaPredicted RBP15.3■□□□□ 0.04
CUX2-201ENST00000261726 H0Y3Z8 333 aa15.3■□□□□ 0.04
CUX2-201ENST00000261726 COPEO14579 308 aa15.3■□□□□ 0.04
CUX2-201ENST00000261726 ZSCAN9O15535 394 aaPredicted RBP15.3■□□□□ 0.04
CUX2-201ENST00000261726 LRRC23Q53EV4 343 aaPredicted RBP15.3■□□□□ 0.04
CUX2-201ENST00000261726 RGS9BPQ6ZS82 235 aa15.3■□□□□ 0.04
CUX2-201ENST00000261726 ELAC2Q9BQ52 826 aaKnown RBP15.3■□□□□ 0.04
CUX2-201ENST00000261726 TEX12Q9BXU0 123 aa15.3■□□□□ 0.04
CUX2-201ENST00000261726 RAD17O75943 681 aa15.3■□□□□ 0.04
CUX2-201ENST00000261726 RBM46Q8TBY0 533 aaKnown RBP15.3■□□□□ 0.04
CUX2-201ENST00000261726 TRIM55Q9BYV6 548 aa15.3■□□□□ 0.04
CUX2-201ENST00000261726 FTOQ9C0B1 505 aaKnown RBP eCLIP15.3■□□□□ 0.04
CUX2-201ENST00000261726 PCCAP05165 728 aaPredicted RBP15.3■□□□□ 0.04
CUX2-201ENST00000261726 ADCK5Q3MIX3 580 aa15.3■□□□□ 0.04
CUX2-201ENST00000261726 DCAF4L1Q3SXM0 396 aa15.3■□□□□ 0.04
CUX2-201ENST00000261726 USP44Q9H0E7 712 aa15.3■□□□□ 0.04
CUX2-201ENST00000261726 SSH2Q76I76 1423 aa15.3■□□□□ 0.04
CUX2-201ENST00000261726 PRDM15P57071 1507 aaPredicted RBP15.3■□□□□ 0.04
CUX2-201ENST00000261726 SLFN14P0C7P3 912 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 PLCG1P19174 1290 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 EIF2AK2P19525 551 aaKnown RBP15.29■□□□□ 0.04
CUX2-201ENST00000261726 NR5A1Q13285 461 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 ZNF467Q7Z7K2 595 aaPredicted RBP15.29■□□□□ 0.04
CUX2-201ENST00000261726 OTULINQ96BN8 352 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 TLR7Q9NYK1 1049 aaKnown RBP15.29■□□□□ 0.04
CUX2-201ENST00000261726 PYGBP11216 843 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 OCA2Q04671 838 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 SUPT20HL1Q3ZLR7 823 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 SCN4BQ8IWT1 228 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 NAF1Q96HR8 494 aaKnown RBP15.29■□□□□ 0.04
CUX2-201ENST00000261726 KLC2Q9H0B6 622 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 CDV3Q9UKY7 258 aaKnown RBP15.29■□□□□ 0.04
CUX2-201ENST00000261726 PLA2R1Q13018 1463 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 TRPM1Q7Z4N2 1603 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 ZNF500O60304 480 aaPredicted RBP15.29■□□□□ 0.04
CUX2-201ENST00000261726 RWDD2AQ9UIY3 292 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 NFU1Q9UMS0 254 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 HEY1Q9Y5J3 304 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 PCP11498 1178 aaKnown RBP15.29■□□□□ 0.04
CUX2-201ENST00000261726 SLC26A7Q8TE54 656 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 ZFYVE19Q96K21 471 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 VPS11Q9H270 941 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 NFKBIAP25963 317 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 CYP27A1Q02318 531 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 KIAA1755Q5JYT7 1200 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 HEMGNQ9BXL5 484 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 RNF26Q9BY78 433 aaPredicted RBP15.29■□□□□ 0.04
CUX2-201ENST00000261726 STRIP2Q9ULQ0 834 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 PEX3P56589 373 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 THNSL1Q8IYQ7 743 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 ULK4Q96C45 1275 aa15.29■□□□□ 0.04
CUX2-201ENST00000261726 DYNLL2Q96FJ2 89 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms