RNA–Protein interactions for RNA: ENST00000261318.4

C12orf49-201, Transcript of chromosome 12 open reading frame 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C12orf49, Length 8,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-201ENST00000261318 NXF1Q9UBU9 619 aaKnown RBP15.98■□□□□ 0.15
C12orf49-201ENST00000261318 G3BP2Q9UN86 482 aaKnown RBP15.98■□□□□ 0.15
C12orf49-201ENST00000261318 MAGI3Q5TCQ9 1506 aa15.98■□□□□ 0.15
C12orf49-201ENST00000261318 CPSF1Q10570 1443 aaKnown RBP15.98■□□□□ 0.15
C12orf49-201ENST00000261318 TRIM49BA6NDI0 452 aa15.98■□□□□ 0.15
C12orf49-201ENST00000261318 DDX17Q92841 729 aaKnown RBP15.98■□□□□ 0.15
C12orf49-201ENST00000261318 TTC1Q99614 292 aa15.98■□□□□ 0.15
C12orf49-201ENST00000261318 KLC2Q9H0B6 622 aa15.98■□□□□ 0.15
C12orf49-201ENST00000261318 PNMA6FA0A0J9YX94 578 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 CREB3O43889 395 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 PSMA2P25787 234 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 GRAMD4Q6IC98 578 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 YIPF3Q9GZM5 350 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 PLEKHG1Q9ULL1 1385 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 PI16Q6UXB8 463 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 HSPH1Q92598 858 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 POLR3CQ9BUI4 534 aaPredicted RBP15.97■□□□□ 0.15
C12orf49-201ENST00000261318 SCHIP1Q9P0W5 487 aaPredicted RBP15.97■□□□□ 0.15
C12orf49-201ENST00000261318 TSPOAP1O95153 1857 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 BCORL1Q5H9F3 1711 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 RPAP1Q9BWH6 1393 aaPredicted RBP15.97■□□□□ 0.15
C12orf49-201ENST00000261318 QRICH2Q9H0J4 1663 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 SASH1O94885 1247 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 C16orf87Q6PH81 154 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 SLC24A3Q9HC58 644 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 TRIM33Q9UPN9 1127 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 NCAPG2Q86XI2 1143 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 CEP19Q96LK0 163 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 KLC4Q9NSK0 619 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.97■□□□□ 0.15
C12orf49-201ENST00000261318 CD58P19256 250 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 USP14P54578 494 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 TRIM67Q6ZTA4 783 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 HDAC6Q9UBN7 1215 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 ADGRG1Q9Y653 693 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 RSRC2Q7L4I2 434 aaKnown RBP15.97■□□□□ 0.15
C12orf49-201ENST00000261318 RBM41Q96IZ5 413 aaKnown RBP15.97■□□□□ 0.15
C12orf49-201ENST00000261318 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.97■□□□□ 0.15
C12orf49-201ENST00000261318 MXD3Q9BW11 206 aa15.97■□□□□ 0.15
C12orf49-201ENST00000261318 PLEKHA8P1O95397 391 aa15.96■□□□□ 0.15
C12orf49-201ENST00000261318 CCND2P30279 289 aa15.96■□□□□ 0.15
C12orf49-201ENST00000261318 UBE2SQ16763 222 aa15.96■□□□□ 0.15
C12orf49-201ENST00000261318 LMTK3Q96Q04 1460 aa15.96■□□□□ 0.15
C12orf49-201ENST00000261318 ACTN3Q08043 901 aaPredicted RBP15.96■□□□□ 0.15
C12orf49-201ENST00000261318 MYO1EQ12965 1108 aa15.96■□□□□ 0.15
C12orf49-201ENST00000261318 TSTA3Q13630 321 aaPredicted RBP15.96■□□□□ 0.15
C12orf49-201ENST00000261318 KIF19Q2TAC6 998 aa15.96■□□□□ 0.15
C12orf49-201ENST00000261318 GPC5P78333 572 aa15.96■□□□□ 0.15
C12orf49-201ENST00000261318 NAA30Q147X3 362 aaPredicted RBP15.96■□□□□ 0.15
C12orf49-201ENST00000261318 FAM47CQ5HY64 1035 aa15.96■□□□□ 0.15
C12orf49-201ENST00000261318 COG1Q8WTW3 980 aa15.96■□□□□ 0.15
C12orf49-201ENST00000261318 CDHR1Q96JP9 859 aa15.96■□□□□ 0.15
C12orf49-201ENST00000261318 APOL6Q9BWW8 343 aa15.96■□□□□ 0.15
C12orf49-201ENST00000261318 ZWILCHQ9H900 591 aa15.96■□□□□ 0.15
C12orf49-201ENST00000261318 FAM96AQ9H5X1 160 aa15.96■□□□□ 0.15
C12orf49-201ENST00000261318 GJB4Q9NTQ9 266 aa15.96■□□□□ 0.15
C12orf49-201ENST00000261318 ZRANB2O95218 330 aaKnown RBP eCLIP15.96■□□□□ 0.15
C12orf49-201ENST00000261318 CHEK2O96017 543 aa15.96■□□□□ 0.15
C12orf49-201ENST00000261318 BMP3P12645 472 aa15.96■□□□□ 0.15
C12orf49-201ENST00000261318 FAM193BQ96PV7 902 aaPredicted RBP15.96■□□□□ 0.15
C12orf49-201ENST00000261318 KIFC3Q9BVG8 833 aa15.96■□□□□ 0.15
C12orf49-201ENST00000261318 DNAJC5BQ9UF47 199 aa15.96■□□□□ 0.15
C12orf49-201ENST00000261318 CTIFO43310 598 aaKnown RBP15.96■□□□□ 0.14
C12orf49-201ENST00000261318 SURF1Q15526 300 aa15.96■□□□□ 0.14
C12orf49-201ENST00000261318 TAF1BQ53T94 588 aaPredicted RBP15.96■□□□□ 0.14
C12orf49-201ENST00000261318 GADL1Q6ZQY3 521 aa15.96■□□□□ 0.14
C12orf49-201ENST00000261318 CHMP6Q96FZ7 201 aa15.96■□□□□ 0.14
C12orf49-201ENST00000261318 IL6STP40189 918 aaPredicted RBP15.96■□□□□ 0.14
C12orf49-201ENST00000261318 DYNC1I2Q13409 638 aaKnown RBP15.96■□□□□ 0.14
C12orf49-201ENST00000261318 SYDE2Q5VT97 1194 aa15.96■□□□□ 0.14
C12orf49-201ENST00000261318 KIF1CO43896 1103 aaKnown RBP15.95■□□□□ 0.14
C12orf49-201ENST00000261318 USP17L8P0C7I0 530 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 DNAJC12Q9UKB3 198 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 TYW5A2RUC4 315 aaKnown RBP15.95■□□□□ 0.14
C12orf49-201ENST00000261318 TMEM259Q4ZIN3 620 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 KCNV2Q8TDN2 545 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 PSPC1Q8WXF1 523 aaKnown RBP15.95■□□□□ 0.14
C12orf49-201ENST00000261318 DHX38Q92620 1227 aaKnown RBP15.95■□□□□ 0.14
C12orf49-201ENST00000261318 TMEM2Q9UHN6 1383 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 USP17L3A6NCW0 530 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 USP17L4A6NCW7 530 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 KRT38O76015 456 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 KLHL38Q2WGJ6 581 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 USP17L1Q7RTZ2 530 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 LCA5Q86VQ0 697 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 C7orf31Q8N865 590 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 WDR19Q8NEZ3 1342 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 ERICH1Q86X53 443 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 GIPC2Q8TF65 315 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.95■□□□□ 0.14
C12orf49-201ENST00000261318 NT5C2P49902 561 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 RGS9BPQ6ZS82 235 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 MRPL40Q9NQ50 206 aaKnown RBP15.95■□□□□ 0.14
C12orf49-201ENST00000261318 CAPN11Q9UMQ6 739 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 CYP2D7A0A087X1C5 515 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 WDR64B1ANS9 1081 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 CASP1P29466 404 aa15.95■□□□□ 0.14
C12orf49-201ENST00000261318 PYGBP11216 843 aa15.94■□□□□ 0.14
C12orf49-201ENST00000261318 PMLP29590 882 aa15.94■□□□□ 0.14
C12orf49-201ENST00000261318 LRRC4Q9HBW1 653 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms