RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 LRRC55Q6ZSA7 311 aa12.58□□□□□ -0.4
CLUHP3-201ENST00000254109 SYT2Q8N9I0 419 aaPredicted RBP12.58□□□□□ -0.4
CLUHP3-201ENST00000254109 TBC1D7Q9P0N9 293 aa12.58□□□□□ -0.4
CLUHP3-201ENST00000254109 FBXO40Q9UH90 709 aa12.58□□□□□ -0.4
CLUHP3-201ENST00000254109 COL4A3BPQ9Y5P4 624 aa12.58□□□□□ -0.4
CLUHP3-201ENST00000254109 PCNTO95613 3336 aa12.58□□□□□ -0.4
CLUHP3-201ENST00000254109 DOCK3Q8IZD9 2030 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 NPHP3-ACAD11A0A0J9YXS1 232 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 A0A0U1RQJ8 604 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 FRMD3A2A2Y4 597 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 PGK2P07205 417 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 EIF2AK2P19525 551 aaKnown RBP12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 ARHGAP25P42331 645 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 CCNA1P78396 465 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 ZCWPW2Q504Y3 356 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 FBXO38Q6PIJ6 1188 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 PPP4R3CPQ6ZMV5 832 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 KIAA1328Q86T90 577 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 SLC35F6Q8N357 371 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 CEP112Q8N8E3 955 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 GLIS3Q8NEA6 775 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 SHCBP1Q8NEM2 672 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 IL31RAQ8NI17 732 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 ATRIPQ8WXE1 791 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 MMP19Q99542 508 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 NAPGQ99747 312 aaPredicted RBP12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 POLR3CQ9BUI4 534 aaPredicted RBP12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 MROH8Q9H579 483 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 HAUS4Q9H6D7 363 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 MMRN2Q9H8L6 949 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 NHEJ1Q9H9Q4 299 aaPredicted RBP12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 MAP3K20Q9NYL2 800 aaKnown RBP12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 PCDHA2Q9Y5H9 948 aa12.57□□□□□ -0.4
CLUHP3-201ENST00000254109 PLXNB2O15031 1838 aa12.56□□□□□ -0.4
CLUHP3-201ENST00000254109 MEIS1O00470 390 aa12.56□□□□□ -0.4
CLUHP3-201ENST00000254109 SPATA31C1P0DKV0 1188 aa12.56□□□□□ -0.4
CLUHP3-201ENST00000254109 HSPA6P17066 643 aa12.56□□□□□ -0.4
CLUHP3-201ENST00000254109 MAP2K2P36507 400 aa12.56□□□□□ -0.4
CLUHP3-201ENST00000254109 RAD51AP2Q09MP3 1159 aa12.56□□□□□ -0.4
CLUHP3-201ENST00000254109 ARSHQ5FYA8 562 aa12.56□□□□□ -0.4
CLUHP3-201ENST00000254109 NELFCDQ8IXH7 590 aa12.56□□□□□ -0.4
CLUHP3-201ENST00000254109 SAMD3Q8N6K7 520 aa12.56□□□□□ -0.4
CLUHP3-201ENST00000254109 EHBP1Q8NDI1 1231 aa12.56□□□□□ -0.4
CLUHP3-201ENST00000254109 GOLGA1Q92805 767 aa12.56□□□□□ -0.4
CLUHP3-201ENST00000254109 RMDN3Q96TC7 470 aa12.56□□□□□ -0.4
CLUHP3-201ENST00000254109 EDEM3Q9BZQ6 932 aa12.56□□□□□ -0.4
CLUHP3-201ENST00000254109 OGFRQ9NZT2 677 aa12.56□□□□□ -0.4
CLUHP3-201ENST00000254109 CDC23Q9UJX2 597 aa12.56□□□□□ -0.4
CLUHP3-201ENST00000254109 VAV3Q9UKW4 847 aa12.56□□□□□ -0.4
CLUHP3-201ENST00000254109 SIK3Q9Y2K2 1263 aa12.56□□□□□ -0.4
CLUHP3-201ENST00000254109 ASTN1O14525 1302 aa12.56□□□□□ -0.4
CLUHP3-201ENST00000254109 EIF3CLB5ME19 914 aaKnown RBP12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 KRT86O43790 486 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 TRPA1O75762 1119 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 ALDH1A1P00352 501 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 H2AFXP16104 143 aaPredicted RBP12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 COPB2P35606 906 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 TUBB4BP68371 445 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 CACNB1Q02641 598 aaPredicted RBP12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 GIT2Q14161 759 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 KCTD2Q14681 263 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 SPA17Q15506 151 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 CCDC122Q5T0U0 273 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 ARHGEF16Q5VV41 709 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 ZNF662Q6ZS27 426 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 GPR142Q7Z601 462 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 REM2Q8IYK8 340 aaPredicted RBP12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 NEK11Q8NG66 645 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 CYP2W1Q8TAV3 490 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 SCFD1Q8WVM8 642 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 CCDC42Q96M95 316 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 EIF3CQ99613 913 aaKnown RBP12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 EIF2AK1Q9BQI3 630 aaKnown RBP12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 PXMP2Q9NR77 195 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 FAM207AQ9NSI2 230 aaPredicted RBP12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 RNF186Q9NXI6 227 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 GUCA1BQ9UMX6 200 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 REXO2Q9Y3B8 237 aaKnown RBP12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 PFASO15067 1338 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 RPTORQ8N122 1335 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 IGLV3-22A0A075B6J6 115 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 SOWAHBA6NEL2 793 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 EYA4O95677 639 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 PSMC6P62333 389 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 PGM5Q15124 567 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 EDRF1Q3B7T1 1238 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 LRCH2Q5VUJ6 765 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 CACNA2D4Q7Z3S7 1137 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 GPR161Q8N6U8 529 aaKnown RBP12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 JAKMIP2Q96AA8 810 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 TUFT1Q9NNX1 390 aa12.55□□□□□ -0.4
CLUHP3-201ENST00000254109 ZSWIM8A7E2V4 1837 aa12.54□□□□□ -0.4
CLUHP3-201ENST00000254109 DNAJC25-GNG10A0A024R161 153 aa12.54□□□□□ -0.4
CLUHP3-201ENST00000254109 SPDYE4A6NLX3 237 aa12.54□□□□□ -0.4
CLUHP3-201ENST00000254109 POTEB2H3BUK9 544 aa12.54□□□□□ -0.4
CLUHP3-201ENST00000254109 CETN3O15182 167 aa12.54□□□□□ -0.4
CLUHP3-201ENST00000254109 CALUO43852 315 aaPredicted RBP12.54□□□□□ -0.4
CLUHP3-201ENST00000254109 TBCAO75347 108 aaKnown RBP12.54□□□□□ -0.4
CLUHP3-201ENST00000254109 MYCLP12524 364 aaPredicted RBP12.54□□□□□ -0.4
CLUHP3-201ENST00000254109 CTGFP29279 349 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms