RNA–Protein interactions for RNA: ENST00000253807.2

PCDHAC1-201, Transcript of protocadherin alpha subfamily C, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHAC1, Length 5,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1-201ENST00000253807 NCOA3Q9Y6Q9 1424 aa13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 COL3A1P02461 1466 aaPredicted RBP13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 A0A1B0GTH6 734 aa13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 INHBAP08476 426 aa13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 FDX1P10109 184 aa13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 SLC7A5Q01650 507 aa13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 DMTNQ08495 405 aa13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 ZBTB33Q86T24 672 aa13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 MARCH10Q8NA82 808 aaPredicted RBP13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 PRPF38AQ8NAV1 312 aaKnown RBP13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 CCDC197Q8NCU1 140 aa13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 BANK1Q8NDB2 785 aa13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 TCP11Q8WWU5 503 aa13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 KAZALD1Q96I82 304 aa13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 AP1M1Q9BXS5 423 aa13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 CAPN11Q9UMQ6 739 aa13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 FLT1P17948 1338 aa13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 PDS5AQ29RF7 1337 aaKnown RBP13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 MCF2LO15068 1137 aa13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 QARSP47897 775 aaKnown RBP13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 DPYDQ12882 1025 aa13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 TTC19Q6DKK2 380 aaPredicted RBP13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 NSUN6Q8TEA1 469 aaKnown RBP13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 MAD1L1Q9Y6D9 718 aa13.4□□□□□ -0.26
PCDHAC1-201ENST00000253807 FGGP02679 453 aa13.4□□□□□ -0.27
PCDHAC1-201ENST00000253807 ZNF543Q08ER8 600 aa13.4□□□□□ -0.27
PCDHAC1-201ENST00000253807 STXBP2Q15833 593 aa13.4□□□□□ -0.27
PCDHAC1-201ENST00000253807 TAB3Q8N5C8 712 aaPredicted RBP13.4□□□□□ -0.27
PCDHAC1-201ENST00000253807 FAM167AQ96KS9 214 aa13.4□□□□□ -0.27
PCDHAC1-201ENST00000253807 RAVER2Q9HCJ3 691 aaKnown RBP13.4□□□□□ -0.27
PCDHAC1-201ENST00000253807 FAM205CA6NFA0 338 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 TPD52P55327 224 aaPredicted RBP13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 GABPAQ06546 454 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 PRR5LQ6MZQ0 368 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 EEPD1Q7L9B9 569 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 GIMAP8Q8ND71 665 aaPredicted RBP13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 DPF2Q92785 391 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 APOL6Q9BWW8 343 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 PODXL2Q9NZ53 605 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 NUB1Q9Y5A7 615 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 VWDEQ8N2E2 1590 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 GFPT1Q06210 699 aaPredicted RBP13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 RSPH3Q86UC2 560 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 VCX3BQ9H321 246 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 BCAP29Q9UHQ4 241 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 SPATA31D1Q6ZQQ2 1576 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 PODXLO00592 558 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 FCER1AP12319 257 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 GARSP41250 739 aaKnown RBP13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 MYO1EQ12965 1108 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 CC2D1AQ6P1N0 951 aaPredicted RBP13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 ADSSL1Q8N142 457 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 CFAP57Q96MR6 1250 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 AP5M1Q9H0R1 490 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 SNX25Q9H3E2 840 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 RPF1Q9H9Y2 349 aaKnown RBP13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 SEPT10Q9P0V9 454 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 JCADQ9P266 1359 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 BARGINQ6ZT62 677 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 NFU1Q9UMS0 254 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 HPS5Q9UPZ3 1129 aa13.39□□□□□ -0.27
PCDHAC1-201ENST00000253807 HMGB1P1B2RPK0 211 aaPredicted RBP13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 IPO5O00410 1097 aaKnown RBP13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 CD58P19256 250 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 IFNAR2P48551 515 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 LIG3P49916 1009 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 ELOA2Q8IYF1 753 aaPredicted RBP13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 LINC00116Q8NCU8 138 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 SYNGAP1Q96PV0 1343 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 LRRD1A4D1F6 860 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 RFX1P22670 979 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 STAT3P40763 770 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 GCLMP48507 274 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 GPC5P78333 572 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 ANKRD40Q6AI12 368 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 ARHGEF18Q6ZSZ5 1173 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 FAM149B1Q96BN6 582 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 C7orf25Q9BPX7 421 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 EIF2AK1Q9BQI3 630 aaKnown RBP13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 RNF146Q9NTX7 359 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 STK38LQ9Y2H1 464 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 SALL3Q9BXA9 1300 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 SLC26A4O43511 780 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 SRGAP2O75044 1071 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 SRGAP2CP0DJJ0 459 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 EPHA7Q15375 998 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 CYP4F22Q6NT55 531 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 C16orf86Q6ZW13 317 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 NLRP7Q8WX94 980 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 RASGRF2O14827 1237 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 RHOBTB3O94955 611 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 EYA4O95677 639 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 CNGA1P29973 690 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 ITPK1Q13572 414 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 STRIP1Q5VSL9 837 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 FRMD5Q7Z6J6 570 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 ZMYND12Q9H0C1 365 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 ITSN1Q15811 1721 aa13.38□□□□□ -0.27
PCDHAC1-201ENST00000253807 ITIH6Q6UXX5 1313 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms