RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 YTHDC1Q96MU7 727 aaKnown RBP4.29□□□□□ -1.72
RBM39-201ENST00000253363 USP44Q9H0E7 712 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 DDX19BQ9UMR2 479 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 AP4E1Q9UPM8 1137 aa4.29□□□□□ -1.72
RBM39-201ENST00000253363 GAKO14976 1311 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 BLACEA4D250 179 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 GSG1L2A8MUP6 293 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 SHOXO15266 292 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 TMPRSS2O15393 492 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 KATNA1O75449 491 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 FGAP02671 866 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 GNALP38405 381 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 TM4SF4P48230 202 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 COL9A3Q14050 684 aaPredicted RBP4.28□□□□□ -1.72
RBM39-201ENST00000253363 TTLL4Q14679 1199 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 KCTD2Q14681 263 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 LRRC41Q15345 812 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 TTF1Q15361 905 aaPredicted RBP4.28□□□□□ -1.72
RBM39-201ENST00000253363 MFSD14BQ5SR56 506 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 C10orf62Q5T681 223 aaPredicted RBP4.28□□□□□ -1.72
RBM39-201ENST00000253363 ANGEL2Q5VTE6 544 aaKnown RBP4.28□□□□□ -1.72
RBM39-201ENST00000253363 PRAMEF13Q5VWM6 474 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 CC2D1AQ6P1N0 951 aaPredicted RBP4.28□□□□□ -1.72
RBM39-201ENST00000253363 OLFM4Q6UX06 510 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 ZNF227Q86WZ6 799 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 RPAP2Q8IXW5 612 aaPredicted RBP4.28□□□□□ -1.72
RBM39-201ENST00000253363 DZIP1LQ8IYY4 767 aaKnown RBP4.28□□□□□ -1.72
RBM39-201ENST00000253363 CHAC2Q8WUX2 184 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 GPR101Q96P66 508 aaPredicted RBP4.28□□□□□ -1.72
RBM39-201ENST00000253363 COL25A1Q9BXS0 654 aaPredicted RBP4.28□□□□□ -1.72
RBM39-201ENST00000253363 ZHX3Q9H4I2 956 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 DISC1Q9NRI5 854 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 LRP2BPQ9P2M1 347 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 SUCOQ9UBS9 1254 aaKnown RBP4.28□□□□□ -1.72
RBM39-201ENST00000253363 SCN9AQ15858 1988 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 ATRNL1Q5VV63 1379 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 RBBP6Q7Z6E9 1792 aaKnown RBP4.28□□□□□ -1.72
RBM39-201ENST00000253363 WNT10BO00744 389 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 GTF2A2P52657 109 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 KRT76Q01546 638 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 G3BP1Q13283 466 aaKnown RBP eCLIP4.28□□□□□ -1.72
RBM39-201ENST00000253363 LONRF1Q17RB8 773 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 CFAP100Q494V2 611 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 SLCO4C1Q6ZQN7 724 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 CHSY3Q70JA7 882 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 EGFL6Q8IUX8 553 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 ACDQ96AP0 544 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 ZNF669Q96BR6 464 aaPredicted RBP4.28□□□□□ -1.72
RBM39-201ENST00000253363 ERO1AQ96HE7 468 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 C8orf48Q96LL4 319 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 FANCD2OSQ96PS1 177 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 DHRS4Q9BTZ2 278 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 IDI2Q9BXS1 227 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 ZNF341Q9BYN7 854 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 GLIS2Q9BZE0 524 aaPredicted RBP4.28□□□□□ -1.72
RBM39-201ENST00000253363 RAD18Q9NS91 495 aa4.28□□□□□ -1.72
RBM39-201ENST00000253363 NOB1Q9ULX3 412 aaKnown RBP4.28□□□□□ -1.72
RBM39-201ENST00000253363 DIS3Q9Y2L1 958 aaKnown RBP4.28□□□□□ -1.72
RBM39-201ENST00000253363 SHISA8B8ZZ34 492 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 TCERG1O14776 1098 aaKnown RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 FRAT2O75474 233 aaPredicted RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 FOSP01100 380 aaPredicted RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 RRM1P23921 792 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 CD68P34810 354 aaPredicted RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 PMS1P54277 932 aaKnown RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 ERVK-24P63145 666 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 STRN3Q13033 797 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 PPIL2Q13356 520 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 TBC1D10BQ4KMP7 808 aaPredicted RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 FGD2Q7Z6J4 655 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 ADAT2Q7Z6V5 191 aaKnown RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 AFAP1L2Q8N4X5 818 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 ZNF513Q8N8E2 541 aaPredicted RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 GALNT6Q8NCL4 622 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 SSH3Q8TE77 659 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 FAM151AQ8WW52 585 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 BRF1Q92994 677 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 FAM84BQ96KN1 310 aaPredicted RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 DHX36Q9H2U1 1008 aaKnown RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 CAAP1Q9H8G2 361 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 OSGEPQ9NPF4 335 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 TRBV23-1A0A0A0MS06 115 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 FAM155AB1AL88 458 aaPredicted RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 RGS13O14921 159 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 BAG3O95817 575 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 NBPF7P0C2Y1 421 aaPredicted RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 VDRP11473 427 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 TRIM27P14373 513 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 YARSP54577 528 aaKnown RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 ID3Q02535 119 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 SLBPQ14493 270 aaKnown RBP eCLIP4.27□□□□□ -1.73
RBM39-201ENST00000253363 SUZ12Q15022 739 aaKnown RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 PRSS53Q2L4Q9 553 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 SKOR2Q2VWA4 1001 aaPredicted RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 CCDC158Q5M9N0 1113 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 CST9Q5W186 159 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 CTU1Q7Z7A3 348 aaKnown RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 SYNPOQ8N3V7 929 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 PAF1Q8N7H5 531 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms