RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 SBK1Q52WX2 424 aa13.03□□□□□ -0.32
USHBP1-201ENST00000252597 MEI1Q5TIA1 1274 aa13.03□□□□□ -0.32
USHBP1-201ENST00000252597 KDM7AQ6ZMT4 941 aa13.03□□□□□ -0.32
USHBP1-201ENST00000252597 MAGEF1Q9HAY2 307 aa13.03□□□□□ -0.32
USHBP1-201ENST00000252597 MYH6P13533 1939 aa13.03□□□□□ -0.32
USHBP1-201ENST00000252597 ZBTB39O15060 712 aa13.03□□□□□ -0.32
USHBP1-201ENST00000252597 CAND2O75155 1236 aa13.03□□□□□ -0.32
USHBP1-201ENST00000252597 AFPP02771 609 aaKnown RBP13.03□□□□□ -0.32
USHBP1-201ENST00000252597 KCNJ1P48048 391 aa13.03□□□□□ -0.32
USHBP1-201ENST00000252597 FIGNQ5HY92 759 aa13.03□□□□□ -0.32
USHBP1-201ENST00000252597 CAVIN3Q969G5 261 aa13.03□□□□□ -0.32
USHBP1-201ENST00000252597 SEC16BQ96JE7 1060 aa13.03□□□□□ -0.32
USHBP1-201ENST00000252597 FMO2Q99518 471 aa13.03□□□□□ -0.32
USHBP1-201ENST00000252597 SLC24A3Q9HC58 644 aa13.03□□□□□ -0.32
USHBP1-201ENST00000252597 NAGPAQ9UK23 515 aa13.03□□□□□ -0.32
USHBP1-201ENST00000252597 DBR1Q9UK59 544 aaKnown RBP13.03□□□□□ -0.32
USHBP1-201ENST00000252597 DNM3Q9UQ16 869 aa13.03□□□□□ -0.32
USHBP1-201ENST00000252597 SSU72P8A0A1W2PR75 194 aa13.02□□□□□ -0.32
USHBP1-201ENST00000252597 ATMINO43313 823 aaPredicted RBP13.02□□□□□ -0.32
USHBP1-201ENST00000252597 MED24O75448 989 aa13.02□□□□□ -0.32
USHBP1-201ENST00000252597 FAM107AO95990 144 aa13.02□□□□□ -0.32
USHBP1-201ENST00000252597 EPB41P11171 864 aaKnown RBP13.02□□□□□ -0.32
USHBP1-201ENST00000252597 TNFAIP3P21580 790 aa13.02□□□□□ -0.32
USHBP1-201ENST00000252597 NMT1P30419 496 aaKnown RBP13.02□□□□□ -0.32
USHBP1-201ENST00000252597 STAT1P42224 750 aa13.02□□□□□ -0.32
USHBP1-201ENST00000252597 PPP2R2AP63151 447 aa13.02□□□□□ -0.32
USHBP1-201ENST00000252597 NSMFQ6X4W1 530 aa13.02□□□□□ -0.32
USHBP1-201ENST00000252597 GDAP1Q8TB36 358 aa13.02□□□□□ -0.32
USHBP1-201ENST00000252597 PIK3R5Q8WYR1 880 aa13.02□□□□□ -0.32
USHBP1-201ENST00000252597 AZI2Q9H6S1 392 aa13.02□□□□□ -0.32
USHBP1-201ENST00000252597 GDF3Q9NR23 364 aa13.02□□□□□ -0.32
USHBP1-201ENST00000252597 M0R2N6 131 aa13.02□□□□□ -0.33
USHBP1-201ENST00000252597 RGS16O15492 202 aaPredicted RBP13.02□□□□□ -0.33
USHBP1-201ENST00000252597 FAM13AO94988 1023 aa13.02□□□□□ -0.33
USHBP1-201ENST00000252597 SHBGP04278 402 aa13.02□□□□□ -0.33
USHBP1-201ENST00000252597 GALCP54803 685 aa13.02□□□□□ -0.33
USHBP1-201ENST00000252597 SNCBQ16143 134 aa13.02□□□□□ -0.33
USHBP1-201ENST00000252597 IFI16Q16666 785 aaKnown RBP13.02□□□□□ -0.33
USHBP1-201ENST00000252597 CYP2W1Q8TAV3 490 aa13.02□□□□□ -0.33
USHBP1-201ENST00000252597 INPP4AQ96PE3 977 aaPredicted RBP13.02□□□□□ -0.33
USHBP1-201ENST00000252597 LRRC27Q9C0I9 530 aa13.02□□□□□ -0.33
USHBP1-201ENST00000252597 SPEF2Q9C093 1822 aa13.02□□□□□ -0.33
USHBP1-201ENST00000252597 ACSL3O95573 720 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 MMEP08473 750 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 SCP2P22307 547 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 ITGB3BPQ13352 177 aaPredicted RBP13.01□□□□□ -0.33
USHBP1-201ENST00000252597 SF3B3Q15393 1217 aaKnown RBP13.01□□□□□ -0.33
USHBP1-201ENST00000252597 GLE1Q53GS7 698 aaKnown RBP13.01□□□□□ -0.33
USHBP1-201ENST00000252597 CCDC105Q8IYK2 499 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 HVCN1Q96D96 273 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 FAM118BQ9BPY3 351 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 LZTS2Q9BRK4 669 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 CCNL1Q9UK58 526 aaPredicted RBP13.01□□□□□ -0.33
USHBP1-201ENST00000252597 AKAP3O75969 853 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 EZRP15311 586 aaKnown RBP13.01□□□□□ -0.33
USHBP1-201ENST00000252597 PRLRP16471 622 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 CDK17Q00537 523 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 UAP1Q16222 522 aaPredicted RBP13.01□□□□□ -0.33
USHBP1-201ENST00000252597 DENND2CQ68D51 928 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 KIF2BQ8N4N8 673 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 TMBIM4Q9HC24 238 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 AJAP1Q9UKB5 411 aaPredicted RBP13.01□□□□□ -0.33
USHBP1-201ENST00000252597 FGRP09769 529 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 PLCG2P16885 1265 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 NEDD1Q8NHV4 660 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.01□□□□□ -0.33
USHBP1-201ENST00000252597 REEP2Q9BRK0 252 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 SPZ1Q9BXG8 430 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 JMJD4Q9H9V9 463 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 ACP6Q9NPH0 428 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 LEMD3Q9Y2U8 911 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 DAAM1Q9Y4D1 1078 aa13.01□□□□□ -0.33
USHBP1-201ENST00000252597 GOLGA6L10A0A0M3HER8 536 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 DNM1LO00429 736 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 GDF11O95390 407 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 IFI35P80217 286 aaPredicted RBP13□□□□□ -0.33
USHBP1-201ENST00000252597 SKOR1P84550 965 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 DR1Q01658 176 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 COG2Q14746 738 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 CNBD1Q8NA66 436 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 HAS1Q92839 578 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 DNAJC19Q96DA6 116 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 USP40Q9NVE5 1235 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 GSTTP1A0A1W2PQM5 241 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 CFBP00751 764 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 CHN1P15882 459 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 CYP11B2P19099 503 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 PEX19P40855 299 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 HP1BP3Q5SSJ5 553 aaPredicted RBP13□□□□□ -0.33
USHBP1-201ENST00000252597 TAB3Q8N5C8 712 aaPredicted RBP13□□□□□ -0.33
USHBP1-201ENST00000252597 BTBD6Q96KE9 485 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 MTMR9Q96QG7 549 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 PSMD1Q99460 953 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 PRMT1Q99873 361 aaKnown RBP13□□□□□ -0.33
USHBP1-201ENST00000252597 ISCUQ9H1K1 167 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 INTS9Q9NV88 658 aaKnown RBP13□□□□□ -0.33
USHBP1-201ENST00000252597 PPP1R9AQ9ULJ8 1098 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 MYH7P12883 1935 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 SPOPO43791 374 aa13□□□□□ -0.33
USHBP1-201ENST00000252597 TRIM59Q8IWR1 403 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms