RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 RPA1P27694 616 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 ZNF211Q13398 564 aaPredicted RBP13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 TMEM179Q6ZVK1 233 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 KCTD10Q9H3F6 313 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 NAGPAQ9UK23 515 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 SCAF8Q9UPN6 1271 aaKnown RBP13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 SCN7AQ01118 1682 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 AFF2P51816 1311 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 EML1O00423 815 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 COPB2P35606 906 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 ECE1P42892 770 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 SLC12A3P55017 1021 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 COG2Q14746 738 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 COBLL1Q53SF7 1204 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 ALS2CLQ60I27 953 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 MIGA2Q7L4E1 593 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 CERKQ8TCT0 537 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 TYW1Q9NV66 732 aaKnown RBP13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 RNF14Q9UBS8 474 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 AMFRQ9UKV5 643 aa13.75□□□□□ -0.21
RAB3IP-201ENST00000247833 E7EVH7 732 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 BACH1O14867 736 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 NPR1P16066 1061 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 EDRF1Q3B7T1 1238 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 DHX37Q8IY37 1157 aaKnown RBP13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 BANK1Q8NDB2 785 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 DNAJC18Q9H819 358 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 CTTNBP2NLQ9P2B4 639 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 NOC2LQ9Y3T9 749 aaKnown RBP13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 ERLIN2O94905 339 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 PSMC2P35998 433 aaKnown RBP13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 STXBP4Q6ZWJ1 553 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 HOOK2Q96ED9 719 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 CELF4Q9BZC1 486 aaKnown RBP13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 PARVGQ9HBI0 331 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 KCNMB3Q9NPA1 279 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 DNAJC12Q9UKB3 198 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 GCOM1H8Y6P7 765 aaPredicted RBP13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 SART1O43290 800 aaKnown RBP13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 ECE2O60344 883 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 FGGP02679 453 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 MYZAPP0CAP1 466 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 NR1D1P20393 614 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 CLK2P49760 499 aaKnown RBP13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 AOC3Q16853 763 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 KRT71Q3SY84 523 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 HHIPL2Q6UWX4 724 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 FRMD5Q7Z6J6 570 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 SYT2Q8N9I0 419 aaPredicted RBP13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 USP38Q8NB14 1042 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 TMEM51Q9NW97 253 aa13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.74□□□□□ -0.21
RAB3IP-201ENST00000247833 DAPK3O43293 454 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 STAT2P52630 851 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 SP4Q02446 784 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 DRAP1Q14919 205 aaPredicted RBP13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 ASTE1Q2TB18 679 aaPredicted RBP13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 GLE1Q53GS7 698 aaKnown RBP13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 TTMPQ5BVD1 217 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 MEI1Q5TIA1 1274 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 OTUD6BQ8N6M0 293 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 BZW2Q9Y6E2 419 aaKnown RBP13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 IGKV6D-41A0A0C4DH26 115 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 K7ENM7 598 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 PDXKO00764 312 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 EVI5O60447 810 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 POLR2MP0CAP2 368 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 ITGA4P13612 1032 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 ZNF746Q6NUN9 644 aaPredicted RBP13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 METTL13Q8N6R0 699 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 CCDC26Q8TAB7 109 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 ZNF577Q9BSK1 485 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 GANQ9H2C0 597 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 ARHGEF10LQ9HCE6 1279 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 OSGEPQ9NPF4 335 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 NYAP2Q9P242 653 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 PRR12Q9ULL5 1215 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 FAM169AQ9Y6X4 670 aa13.73□□□□□ -0.21
RAB3IP-201ENST00000247833 HOXA10P31260 410 aaPredicted RBP13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 INPP5BP32019 993 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 PDE6BP35913 854 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 GALCP54803 685 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 NLGN1Q8N2Q7 840 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 MSL3Q8N5Y2 521 aaKnown RBP13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 SYN2Q92777 582 aaPredicted RBP13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 FAM20AQ96MK3 541 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 QTRT2Q9H974 415 aaKnown RBP13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 ATF5Q9Y2D1 282 aaPredicted RBP13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 SPATA31C1P0DKV0 1188 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 SEC24CP53992 1094 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 MKRN4PQ13434 485 aaPredicted RBP13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 CCDC25Q86WR0 208 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 ACER1Q8TDN7 264 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 PPM1EQ8WY54 764 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 P2RX7Q99572 595 aaKnown RBP13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 ATP8A1Q9Y2Q0 1164 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 UTP11Q9Y3A2 253 aaKnown RBP13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 PITPNM2Q9BZ72 1349 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 GOLGA6L10A0A0M3HER8 536 aa13.72□□□□□ -0.21
RAB3IP-201ENST00000247833 TTI1O43156 1089 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms