RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 MT-ND3P03897 115 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 CABLES1Q8TDN4 633 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 MCM8Q9UJA3 840 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 NCAPD2Q15021 1401 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 SALL1Q9NSC2 1324 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 A0A0U1RQJ8 604 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 MAPK4P31152 587 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 USP11P51784 963 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 ESRRGP62508 458 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 AP2B1P63010 937 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 CCDC137Q6PK04 289 aaKnown RBP10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 SLFN12Q8IYM2 578 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 RFFLQ8WZ73 363 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 TTC1Q99614 292 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 PHF20Q9BVI0 1012 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.26□□□□□ -0.771e-6■■■■□ 21
NUDCD1-201ENST00000239690 DCTN4Q9UJW0 460 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 EXOC7Q9UPT5 735 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 LEMD3Q9Y2U8 911 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 ATXN2Q99700 1313 aaKnown RBP10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 ROBO2Q9HCK4 1378 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 TMEM2Q9UHN6 1383 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 OVOS2A0A0G2JMS6 1433 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 GYG1P46976 350 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 PABPC4Q13310 644 aaKnown RBP eCLIP10.26□□□□□ -0.772e-10■■□□□ 13.6
NUDCD1-201ENST00000239690 RASGRF1Q13972 1273 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 SCARF1Q14162 830 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 CCDC14Q49A88 953 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 ATG9AQ7Z3C6 839 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 PITPNM2Q9BZ72 1349 aa10.26□□□□□ -0.77
NUDCD1-201ENST00000239690 TMEM120BA0PK00 339 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 TRAPPC3O43617 180 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 UBOX5O94941 541 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 GSTA2P09210 222 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 MYBL2P10244 700 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 STK4Q13043 487 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 PROCA1Q8NCQ7 364 aaPredicted RBP10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 NLRP7Q8WX94 980 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 FAM161BQ96MY7 647 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 ABCA9Q8IUA7 1624 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 USP32Q8NFA0 1604 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 CYP2D7A0A087X1C5 515 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 CFAP69A5D8W1 941 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 SPECC1L-ADORA2AF8WAN1 911 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 CLIC2O15247 247 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 SHOX2O60902 331 aaPredicted RBP10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 TRPA1O75762 1119 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 PRPF6O94906 941 aaKnown RBP10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 ELF3P78545 371 aaPredicted RBP10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 C1orf146Q5VVC0 180 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 CRELD2Q6UXH1 353 aaPredicted RBP10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 CREG2Q8IUH2 290 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 MAPKAPK5Q8IW41 473 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 MAML1Q92585 1016 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 HIC2Q96JB3 615 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 ERP44Q9BS26 406 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 MXD3Q9BW11 206 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 PABPC3Q9H361 631 aaKnown RBP10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 PSTPIP2Q9H939 334 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 CHCHD3Q9NX63 227 aaKnown RBP10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 DBR1Q9UK59 544 aaKnown RBP10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 ERVV-2B6SEH9 535 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 PLA2G4BP0C869 781 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 MARK3P27448 753 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 AMPD2Q01433 879 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 TRMT10CQ7L0Y3 403 aaKnown RBP10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 TPH2Q8IWU9 490 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 TTLL11Q8NHH1 800 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 PIP4K2CQ8TBX8 421 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 KAT2BQ92831 832 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 ROPN1BQ9BZX4 212 aaPredicted RBP10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 ROPN1Q9HAT0 212 aaPredicted RBP10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 PPARGC1AQ9UBK2 798 aaKnown RBP10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 XDHP47989 1333 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 FAM237AA0A1B0GTK4 181 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 PDE2AO00408 941 aaPredicted RBP10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 PLS3P13797 630 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 VHLP40337 213 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 TOB1P50616 345 aaPredicted RBP10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 DYNLL1P63167 89 aaKnown RBP10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 SLC29A2Q14542 456 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 KAZNQ674X7 775 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 MAEAQ7L5Y9 396 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 COL23A1Q86Y22 540 aaPredicted RBP10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 FBXL16Q8N461 479 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 DTX3LQ8TDB6 740 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 TGFBRAP1Q8WUH2 860 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 SENP2Q9HC62 589 aa10.25□□□□□ -0.77
NUDCD1-201ENST00000239690 UTYO14607 1347 aa10.24□□□□□ -0.77
NUDCD1-201ENST00000239690 MYOM1P52179 1685 aa10.24□□□□□ -0.77
NUDCD1-201ENST00000239690 ARHGAP10A1A4S6 786 aa10.24□□□□□ -0.77
NUDCD1-201ENST00000239690 ZSCAN5CA6NGD5 496 aaPredicted RBP10.24□□□□□ -0.77
NUDCD1-201ENST00000239690 ASAP2O43150 1006 aa10.24□□□□□ -0.77
NUDCD1-201ENST00000239690 CDH16O75309 829 aa10.24□□□□□ -0.77
NUDCD1-201ENST00000239690 FAM153BP0C7A2 387 aa10.24□□□□□ -0.77
NUDCD1-201ENST00000239690 ACADSP16219 412 aa10.24□□□□□ -0.77
NUDCD1-201ENST00000239690 CNGA1P29973 690 aa10.24□□□□□ -0.77
NUDCD1-201ENST00000239690 ARFIP2P53365 341 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms