RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 GPR75-ASB3A0A0A6YYF3 556 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 CAND2O75155 1236 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 FGGP02679 453 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 SNHG28P0DPA3 235 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 XRCC5P13010 732 aaKnown RBP16.88■□□□□ 0.29
DDX55-201ENST00000238146 GCFC2P16383 781 aaKnown RBP16.88■□□□□ 0.29
DDX55-201ENST00000238146 SLC12A3P55017 1021 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 NPEPPSP55786 919 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 EIF3BP55884 814 aaKnown RBP16.88■□□□□ 0.29
DDX55-201ENST00000238146 JAM2P57087 298 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 PPP1R18Q6NYC8 613 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 SETDB2Q96T68 719 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 FMO2Q99518 471 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 KDM4CQ9H3R0 1056 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 SWAP70Q9UH65 585 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 PNMA2Q9UL42 364 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 INTUQ9ULD6 942 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 PITPNM2Q9BZ72 1349 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 KCNQ2O43526 872 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 MED24O75448 989 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 AKAP3O75969 853 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 ELF1P32519 619 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 KNOP1Q1ED39 458 aaKnown RBP16.88■□□□□ 0.29
DDX55-201ENST00000238146 DCAF17Q5H9S7 520 aaPredicted RBP16.88■□□□□ 0.29
DDX55-201ENST00000238146 CHADLQ6NUI6 762 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 GJB7Q6PEY0 223 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 VPS36Q86VN1 386 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 ADGRF4Q8IZF3 695 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 MAGEC3Q8TD91 643 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 U2AF1L4Q8WU68 220 aaKnown RBP16.88■□□□□ 0.29
DDX55-201ENST00000238146 CUL5Q93034 780 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 CENPTQ96BT3 561 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 GPR101Q96P66 508 aaPredicted RBP16.88■□□□□ 0.29
DDX55-201ENST00000238146 DHX36Q9H2U1 1008 aaKnown RBP16.88■□□□□ 0.29
DDX55-201ENST00000238146 ODF2LQ9ULJ1 636 aa16.88■□□□□ 0.29
DDX55-201ENST00000238146 TTC7AQ9ULT0 858 aaPredicted RBP16.88■□□□□ 0.29
DDX55-201ENST00000238146 OPLAHO14841 1288 aa16.87■□□□□ 0.29
DDX55-201ENST00000238146 GHRP10912 638 aa16.87■□□□□ 0.29
DDX55-201ENST00000238146 GALCP54803 685 aa16.87■□□□□ 0.29
DDX55-201ENST00000238146 EIF6P56537 245 aaKnown RBP16.87■□□□□ 0.29
DDX55-201ENST00000238146 FAM129AQ9BZQ8 928 aa16.87■□□□□ 0.29
DDX55-201ENST00000238146 EPB41L4BQ9H329 900 aa16.87■□□□□ 0.29
DDX55-201ENST00000238146 OSGEPQ9NPF4 335 aa16.87■□□□□ 0.29
DDX55-201ENST00000238146 DONSONQ9NYP3 566 aa16.87■□□□□ 0.29
DDX55-201ENST00000238146 AMFRQ9UKV5 643 aa16.87■□□□□ 0.29
DDX55-201ENST00000238146 CTNND1O60716 968 aaKnown RBP16.87■□□□□ 0.29
DDX55-201ENST00000238146 DNAJC8O75937 253 aaPredicted RBP16.87■□□□□ 0.29
DDX55-201ENST00000238146 IBSPP21815 317 aaPredicted RBP16.87■□□□□ 0.29
DDX55-201ENST00000238146 MRPL12P52815 198 aaKnown RBP16.87■□□□□ 0.29
DDX55-201ENST00000238146 RHBDL3P58872 404 aa16.87■□□□□ 0.29
DDX55-201ENST00000238146 SPDYCQ5MJ68 293 aa16.87■□□□□ 0.29
DDX55-201ENST00000238146 TAX1BP1Q86VP1 789 aa16.87■□□□□ 0.29
DDX55-201ENST00000238146 CLEC10AQ8IUN9 316 aa16.87■□□□□ 0.29
DDX55-201ENST00000238146 SCLT1Q96NL6 688 aa16.87■□□□□ 0.29
DDX55-201ENST00000238146 ZNF317Q96PQ6 595 aaPredicted RBP16.87■□□□□ 0.29
DDX55-201ENST00000238146 CDCA7Q9BWT1 371 aaPredicted RBP16.87■□□□□ 0.29
DDX55-201ENST00000238146 SRP68Q9UHB9 627 aaKnown RBP16.87■□□□□ 0.29
DDX55-201ENST00000238146 POTEFA5A3E0 1075 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 BUB1BO60566 1050 aaPredicted RBP16.86■□□□□ 0.29
DDX55-201ENST00000238146 SHBGP04278 402 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 POTEIP0CG38 1075 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 NF2P35240 595 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 STAT3P40763 770 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 DCAF12L1Q5VU92 463 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 TCERG1LQ5VWI1 586 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 POTEGQ6S5H5 508 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 POTEEQ6S8J3 1075 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 ZDHHC18Q9NUE0 388 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 PPIP5K2O43314 1243 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 MGRN1O60291 552 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 TRIM37O94972 964 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 PTENP60484 403 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 GIT2Q14161 759 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 DUPD1Q68J44 220 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 TTBK2Q6IQ55 1244 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 OLIG1Q8TAK6 271 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 SLC35C1Q96A29 364 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 RAB17Q9H0T7 212 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 PSTPIP2Q9H939 334 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 PPP1R9AQ9ULJ8 1098 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 CDK5RAP2Q96SN8 1893 aa16.86■□□□□ 0.29
DDX55-201ENST00000238146 CCT8L1PA6NM43 557 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 DDX3YO15523 660 aaKnown RBP16.85■□□□□ 0.29
DDX55-201ENST00000238146 CASP4P49662 377 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 ZNF543Q08ER8 600 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 NFIXQ14938 502 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 TPTE2Q6XPS3 522 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 EPM2AIP1Q7L775 607 aaPredicted RBP16.85■□□□□ 0.29
DDX55-201ENST00000238146 ZNF804AQ7Z570 1209 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 SFR1Q86XK3 245 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 LNX1Q8TBB1 728 aaPredicted RBP16.85■□□□□ 0.29
DDX55-201ENST00000238146 N4BP2L2Q92802 583 aaPredicted RBP16.85■□□□□ 0.29
DDX55-201ENST00000238146 KCNMB3Q9NPA1 279 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 GCNT4Q9P109 453 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 ATF5Q9Y2D1 282 aaPredicted RBP16.85■□□□□ 0.29
DDX55-201ENST00000238146 PDXKO00764 312 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 GFPT2O94808 682 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 NUDT17P0C025 328 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 CHN1P15882 459 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 RFC4P35249 363 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms