RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 PSMA7O14818 248 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 ARIH2O95376 493 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 MYL1P05976 194 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 MMP3P08254 477 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 SRGAP2CP0DJJ0 459 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 XRCC6P12956 609 aaKnown RBP eCLIP12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 TAPT1Q6NXT6 567 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 NLRP4Q96MN2 994 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 PPP1R16BQ96T49 567 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 PCDHB13Q9Y5F0 798 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 CCDC85CA6NKD9 419 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 FGFR1OPO95684 399 aaKnown RBP12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 NPEPPSP55786 919 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 PNOCQ13519 176 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 AXDND1Q5T1B0 1012 aaPredicted RBP12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 CCDC60Q8IWA6 550 aaPredicted RBP12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 CCDC155Q8N6L0 562 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 TSPY26PQ9H489 355 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 PARVGQ9HBI0 331 aa12.33□□□□□ -0.44
TNFAIP3-201ENST00000237289 INO80B-WBP1J3KQ70 363 aa12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 SLITRK3O94933 977 aa12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 CYP2C9P11712 490 aa12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 GAP43P17677 238 aa12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 RFC5P40937 340 aa12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 SLC17A8Q8NDX2 589 aa12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 INO80BQ9C086 356 aaPredicted RBP12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 KMT5AQ9NQR1 393 aa12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 MYH6P13533 1939 aa12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 K7ENM7 598 aa12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 ERLIN2O94905 339 aa12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 ZNF865P0CJ78 1059 aaPredicted RBP12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 KCNA10Q16322 511 aa12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 DDX12PQ92771 950 aa12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 KIFAP3Q92845 792 aa12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 PRDM5Q9NQX1 630 aaPredicted RBP12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 CYP26B1Q9NR63 512 aa12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 CYBAP13498 195 aa12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 INSRRP14616 1297 aa12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 STX1AQ16623 288 aa12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 PLPPR4Q7Z2D5 763 aa12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 RHPN2Q8IUC4 686 aa12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 LENG9Q96B70 501 aa12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 TRIM6Q9C030 488 aaPredicted RBP12.32□□□□□ -0.44
TNFAIP3-201ENST00000237289 ASGR1P07306 291 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 SP2Q02086 613 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 C4orf32Q8N8J7 132 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 PAGE5Q96GU1 130 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 UTRNP46939 3433 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 CCNE2O96020 404 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 PPP1R2P41236 205 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 ARHGAP1Q07960 439 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 FAM26FQ5R3K3 315 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 ABHD15Q6UXT9 468 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 CLEC17AQ6ZS10 378 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 MORC4Q8TE76 937 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 SETD4Q9NVD3 440 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 TUBE1Q9UJT0 475 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 GOLGA6L6A8MZA4 724 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 RPN1P04843 607 aaKnown RBP12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 CDC42EP1Q00587 391 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 HSP90AA2PQ14568 343 aaPredicted RBP12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 EFCAB12Q6NXP0 572 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 GRAMD1CQ8IYS0 662 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 SUCLA2Q9P2R7 463 aaPredicted RBP12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 VAV3Q9UKW4 847 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 FRMPD4Q14CM0 1322 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 SFI1A8K8P3 1242 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 PEX3P56589 373 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 TIPINQ9BVW5 301 aa12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 POLR3FQ9H1D9 316 aaPredicted RBP12.31□□□□□ -0.44
TNFAIP3-201ENST00000237289 MOXD2PA6NHM9 499 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 SMTNL1A8MU46 457 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 RGS20O76081 388 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 HARSP12081 509 aaKnown RBP12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 KLRC1P26715 233 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 GRB10Q13322 594 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 EMC2Q15006 297 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 GRIK4Q16099 956 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 CCDC62Q6P9F0 684 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 USP6NLQ92738 828 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 PCMTD1Q96MG8 357 aaPredicted RBP12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 GOLPH3LQ9H4A5 285 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 KCND2Q9NZV8 630 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 ATP11BQ9Y2G3 1177 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 TPM3P06753 285 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 CTGFP29279 349 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 IER5Q5VY09 327 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 NECAB2Q7Z6G3 386 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 DRC7Q8IY82 874 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 ERCC4Q92889 916 aaPredicted RBP12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 TMEM143Q96AN5 459 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 POLD4Q9HCU8 107 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 GSTTP1A0A1W2PQM5 241 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 GAS2O43903 313 aaKnown RBP12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 ABCD1P33897 745 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 LRRC71Q8N4P6 559 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 DNAJC5GQ8N7S2 189 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 PRDM10Q9NQV6 1147 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 MAPK8IP1Q9UQF2 711 aa12.3□□□□□ -0.44
TNFAIP3-201ENST00000237289 GREB1LQ9C091 1923 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms