RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 ATP11AP98196 1134 aa15.37■□□□□ 0.05
PCDHB3-201ENST00000231130 GLG1Q92896 1179 aa15.37■□□□□ 0.05
PCDHB3-201ENST00000231130 PIDD1Q9HB75 910 aa15.37■□□□□ 0.05
PCDHB3-201ENST00000231130 ATP8A2Q9NTI2 1148 aa15.37■□□□□ 0.05
PCDHB3-201ENST00000231130 BCS1LQ9Y276 419 aa15.37■□□□□ 0.05
PCDHB3-201ENST00000231130 COL1A1P02452 1464 aaPredicted RBP15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 DNAJC8O75937 253 aaPredicted RBP15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 LINGO3P0C6S8 592 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 TNFRSF8P28908 595 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 LRRC63Q05C16 580 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 ADCY1Q08828 1119 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 KCNH2Q12809 1159 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 ANKRD20A2Q5SQ80 823 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 ANKRD20A1Q5TYW2 823 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 ANKRD20A3Q5VUR7 823 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 ZNF571Q7Z3V5 609 aaPredicted RBP15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 CCDC25Q86WR0 208 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 SH3GLB2Q9NR46 395 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 KIAA1024Q9UPX6 916 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 KIF13AQ9H1H9 1805 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 DPPA5A6NC42 116 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 SPDYE3A6NKU9 549 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 LAD1O00515 517 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 RTN3O95197 1032 aaPredicted RBP15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 SHBGP04278 402 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 SLC17A8Q8NDX2 589 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 CCHCR1Q8TD31 782 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 RUBCNQ92622 972 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 TMX4Q9H1E5 349 aaPredicted RBP15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 TMEM165Q9HC07 324 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 CHORDC1Q9UHD1 332 aaPredicted RBP15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 SLC12A6Q9UHW9 1150 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 FER1L4A9Z1Z3 1794 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 IGF2BP3O00425 579 aaKnown RBP eCLIP15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 DGKHQ86XP1 1220 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 RAD54LQ92698 747 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 SWAP70Q9UH65 585 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 SNX24Q9Y343 169 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 UTP11Q9Y3A2 253 aaKnown RBP15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 PCDHGC5Q9Y5F6 944 aa15.36■□□□□ 0.05
PCDHB3-201ENST00000231130 TTC36A6NLP5 189 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 TMEM110-MUSTN1A8MSY1 372 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 LUC7L3O95232 432 aaKnown RBP15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 ATP2A2P16615 1042 aaKnown RBP15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 ECHS1P30084 290 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 PPP1R2P41236 205 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 ALDH5A1P51649 535 aaPredicted RBP15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 LRRC14Q15048 493 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 TBC1D25Q3MII6 688 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 HHATQ5VTY9 493 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 LMNTD2Q8IXW0 634 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 LRRC47Q8N1G4 583 aaKnown RBP15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 KDM4CQ9H3R0 1056 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 USP17L5A8MUK1 530 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 PPIP5K2O43314 1243 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 HIP1RO75146 1068 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 MMEP08473 750 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 CHN1P15882 459 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 FERP16591 822 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 NR2F2P24468 414 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 CWF19L1Q69YN2 538 aaKnown RBP15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 KLHL23Q8NBE8 558 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 PSMD1Q99460 953 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 EPAS1Q99814 870 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 LBHD1Q9BQE6 289 aaPredicted RBP15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 MAGEF1Q9HAY2 307 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 CHCHD3Q9NX63 227 aaKnown RBP15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 H0Y3Z8 333 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 MEIS1O00470 390 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 CLIC2O15247 247 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 AHCYL1O43865 530 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 UBE4AQ14139 1066 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 OTUD6AQ7L8S5 288 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 CD302Q8IX05 232 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 MREGQ8N565 214 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 ECT2Q9H8V3 914 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 ARHGEF10LQ9HCE6 1279 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 OSGEPQ9NPF4 335 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 CCDC87Q9NVE4 849 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 RGL1Q9NZL6 768 aa15.35■□□□□ 0.05
PCDHB3-201ENST00000231130 FGRP09769 529 aa15.34■□□□□ 0.05
PCDHB3-201ENST00000231130 PCP11498 1178 aaKnown RBP15.34■□□□□ 0.05
PCDHB3-201ENST00000231130 SLMAPQ14BN4 828 aa15.34■□□□□ 0.05
PCDHB3-201ENST00000231130 GPBP1Q86WP2 473 aa15.34■□□□□ 0.05
PCDHB3-201ENST00000231130 IQCDQ96DY2 449 aa15.34■□□□□ 0.05
PCDHB3-201ENST00000231130 EYA3Q99504 573 aa15.34■□□□□ 0.05
PCDHB3-201ENST00000231130 ZMYND12Q9H0C1 365 aa15.34■□□□□ 0.05
PCDHB3-201ENST00000231130 PCDHB13Q9Y5F0 798 aa15.34■□□□□ 0.05
PCDHB3-201ENST00000231130 SPDYE5A6NIY4 337 aa15.34■□□□□ 0.05
PCDHB3-201ENST00000231130 H0YGN5 161 aa15.34■□□□□ 0.05
PCDHB3-201ENST00000231130 GFPT2O94808 682 aa15.34■□□□□ 0.05
PCDHB3-201ENST00000231130 NTSR2O95665 410 aa15.34■□□□□ 0.05
PCDHB3-201ENST00000231130 C12orf60Q5U649 245 aa15.34■□□□□ 0.05
PCDHB3-201ENST00000231130 NAF1Q96HR8 494 aaKnown RBP15.34■□□□□ 0.05
PCDHB3-201ENST00000231130 RAB34Q9BZG1 259 aa15.34■□□□□ 0.05
PCDHB3-201ENST00000231130 ABCF3Q9NUQ8 709 aa15.34■□□□□ 0.05
PCDHB3-201ENST00000231130 C2CD2Q9Y426 696 aa15.34■□□□□ 0.05
PCDHB3-201ENST00000231130 NFS1Q9Y697 457 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms