RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 ATP8A1Q9Y2Q0 1164 aa15.23■□□□□ 0.03
SCNN1A-201ENST00000228916 STRCQ7RTU9 1775 aa15.23■□□□□ 0.03
SCNN1A-201ENST00000228916 H2AFZP0C0S5 128 aa15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 IBSPP21815 317 aaPredicted RBP15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 ADCY7P51828 1080 aa15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 HIBCHQ6NVY1 386 aaPredicted RBP15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 CRELD2Q6UXH1 353 aaPredicted RBP15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 H2AFVQ71UI9 128 aa15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 ANKS4BQ8N8V4 417 aa15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 CUL5Q93034 780 aa15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 PGM2Q96G03 612 aa15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 NLRP3Q96P20 1036 aa15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 RAB17Q9H0T7 212 aa15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 ZDHHC18Q9NUE0 388 aa15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 CHN1P15882 459 aa15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 PON1P27169 355 aa15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 PTENP60484 403 aa15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 PPP4CP60510 307 aa15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 RIPK1Q13546 671 aa15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 FRMD5Q7Z6J6 570 aa15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 EYA3Q99504 573 aa15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 TRIM51Q9BSJ1 452 aa15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 NT5C3AQ9H0P0 336 aa15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 ZNF287Q9HBT7 754 aa15.22■□□□□ 0.03
SCNN1A-201ENST00000228916 CLGNO14967 610 aa15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 MMEP08473 750 aa15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 PPP1R7Q15435 360 aa15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 DUPD1Q68J44 220 aa15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 DAAM2Q86T65 1068 aa15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 FAXDC2Q96IV6 333 aa15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 UBA5Q9GZZ9 404 aa15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 KDM3AQ9Y4C1 1321 aa15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 DDX60LQ5H9U9 1706 aaKnown RBP15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 A0A1B0GUA9 196 aa15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 CCDC189A1A4V9 331 aa15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 FRMD3A2A2Y4 597 aa15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 SHBGP04278 402 aa15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 NR2F2P24468 414 aa15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 NOVP48745 357 aa15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 JAM2P57087 298 aa15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 EXOC3L4Q17RC7 722 aa15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 HERC4Q5GLZ8 1057 aaPredicted RBP15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 CCDC134Q9H6E4 229 aa15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 EBF2Q9HAK2 575 aa15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 NR2E1Q9Y466 385 aa15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 SPATA31A1Q5TZJ5 1347 aa15.21■□□□□ 0.03
SCNN1A-201ENST00000228916 SBF2Q86WG5 1849 aa15.21■□□□□ 0.02
SCNN1A-201ENST00000228916 DDX3XO00571 662 aaKnown RBP eCLIP15.21■□□□□ 0.02
SCNN1A-201ENST00000228916 RTN2O75298 545 aa15.21■□□□□ 0.02
SCNN1A-201ENST00000228916 FGGP02679 453 aa15.21■□□□□ 0.02
SCNN1A-201ENST00000228916 AFPP02771 609 aaKnown RBP15.21■□□□□ 0.02
SCNN1A-201ENST00000228916 CLNS1AP54105 237 aaKnown RBP15.21■□□□□ 0.02
SCNN1A-201ENST00000228916 C16orf86Q6ZW13 317 aa15.21■□□□□ 0.02
SCNN1A-201ENST00000228916 COA7Q96BR5 231 aa15.21■□□□□ 0.02
SCNN1A-201ENST00000228916 HOOK2Q96ED9 719 aa15.21■□□□□ 0.02
SCNN1A-201ENST00000228916 PABPC3Q9H361 631 aaKnown RBP15.21■□□□□ 0.02
SCNN1A-201ENST00000228916 CDK5RAP2Q96SN8 1893 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 E9PMD0 336 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 PLA2G4BP0C869 781 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 TM4SF1P30408 202 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 CDK8P49336 464 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 CHADLQ6NUI6 762 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 CCDC63Q8NA47 563 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 ARMCX3Q9UH62 379 aaPredicted RBP15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 AMFRQ9UKV5 643 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 NPHP3-ACAD11A0A0J9YXS1 232 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 USP17L5A8MUK1 530 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 CYP11B2P19099 503 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 SLC8A3P57103 927 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 KLRC3Q07444 240 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 PPP2R5EQ16537 467 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 VPS36Q86VN1 386 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 MAB21L3Q8N8X9 362 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 NEK9Q8TD19 979 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 CEP95Q96GE4 821 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 ERP44Q9BS26 406 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 SIX2Q9NPC8 291 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 SRP68Q9UHB9 627 aaKnown RBP15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 DDX25Q9UHL0 483 aaKnown RBP15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 BAIAP2L1Q9UHR4 511 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 TRAF3IP3Q9Y228 551 aa15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 DIS3Q9Y2L1 958 aaKnown RBP15.2■□□□□ 0.02
SCNN1A-201ENST00000228916 CFAP73A6NFT4 308 aa15.19■□□□□ 0.02
SCNN1A-201ENST00000228916 DDX3YO15523 660 aaKnown RBP15.19■□□□□ 0.02
SCNN1A-201ENST00000228916 BAG3O95817 575 aa15.19■□□□□ 0.02
SCNN1A-201ENST00000228916 EPHA7Q15375 998 aa15.19■□□□□ 0.02
SCNN1A-201ENST00000228916 ACCSLQ4AC99 568 aa15.19■□□□□ 0.02
SCNN1A-201ENST00000228916 GPBP1Q86WP2 473 aa15.19■□□□□ 0.02
SCNN1A-201ENST00000228916 TRIM31Q9BZY9 425 aa15.19■□□□□ 0.02
SCNN1A-201ENST00000228916 AJAP1Q9UKB5 411 aaPredicted RBP15.19■□□□□ 0.02
SCNN1A-201ENST00000228916 CCDC169A6NNP5 214 aa15.19■□□□□ 0.02
SCNN1A-201ENST00000228916 TNNI2P48788 182 aa15.19■□□□□ 0.02
SCNN1A-201ENST00000228916 PMS2P54278 862 aa15.19■□□□□ 0.02
SCNN1A-201ENST00000228916 CACNB1Q02641 598 aaPredicted RBP15.19■□□□□ 0.02
SCNN1A-201ENST00000228916 DCAF12L1Q5VU92 463 aa15.19■□□□□ 0.02
SCNN1A-201ENST00000228916 NBPF5PQ86XG9 351 aaPredicted RBP15.19■□□□□ 0.02
SCNN1A-201ENST00000228916 LRRC34Q8IZ02 419 aa15.19■□□□□ 0.02
SCNN1A-201ENST00000228916 OLIG1Q8TAK6 271 aa15.19■□□□□ 0.02
SCNN1A-201ENST00000228916 RNF25Q96BH1 459 aaPredicted RBP15.19■□□□□ 0.02
SCNN1A-201ENST00000228916 CDCA7Q9BWT1 371 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms