RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 EYA3Q99504 573 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 LSM14BQ9BX40 385 aaKnown RBP15.34■□□□□ 0.05
SF1-201ENST00000227503 FOXO6A8MYZ6 492 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 KRIT1O00522 736 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 KRT16P08779 473 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 PAEPP09466 180 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 PPP1R2P41236 205 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 GNPTABQ3T906 1256 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 TRPM8Q7Z2W7 1104 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 RNF10Q8N5U6 811 aaKnown RBP15.34■□□□□ 0.05
SF1-201ENST00000227503 C1orf131Q8NDD1 294 aaKnown RBP15.34■□□□□ 0.05
SF1-201ENST00000227503 TBCKQ8TEA7 893 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 UIMC1Q96RL1 719 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 TSKSQ9UJT2 592 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 SRRM3A6NNA2 597 aaPredicted RBP15.34■□□□□ 0.05
SF1-201ENST00000227503 LDHCP07864 332 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 LINGO3P0C6S8 592 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 GHRP10912 638 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 GRAPQ13588 217 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 MAN2A1Q16706 1144 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 FAM98CQ17RN3 349 aaKnown RBP15.34■□□□□ 0.05
SF1-201ENST00000227503 SLC9C1Q4G0N8 1177 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 SFMBT2Q5VUG0 894 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 CENPPQ6IPU0 288 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 GRAPLQ8TC17 118 aaPredicted RBP15.34■□□□□ 0.05
SF1-201ENST00000227503 AZI2Q9H6S1 392 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 NOP53Q9NZM5 478 aaKnown RBP15.34■□□□□ 0.05
SF1-201ENST00000227503 TMEM59LQ9UK28 342 aa15.34■□□□□ 0.05
SF1-201ENST00000227503 LGR5O75473 907 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 NOL4O94818 638 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 SMARCA1P28370 1054 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 BTDP43251 543 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 NCALDP61601 193 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 AMPD3Q01432 767 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 FAM83BQ5T0W9 1011 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 CNNM4Q6P4Q7 775 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 METTL13Q8N6R0 699 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 ANKS4BQ8N8V4 417 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 ARHGEF1Q92888 912 aaKnown RBP15.33■□□□□ 0.04
SF1-201ENST00000227503 PIGSQ96S52 555 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 ECT2Q9H8V3 914 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 ZNF287Q9HBT7 754 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 BLOC1S4Q9NUP1 217 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 SLC5A4Q9NY91 659 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 TBC1D7Q9P0N9 293 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 DDX60LQ5H9U9 1706 aaKnown RBP15.33■□□□□ 0.04
SF1-201ENST00000227503 GRB10Q13322 594 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 AGBL2Q5U5Z8 902 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 ZNF804AQ7Z570 1209 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 ZNF526Q8TF50 670 aaPredicted RBP15.33■□□□□ 0.04
SF1-201ENST00000227503 MTMR9Q96QG7 549 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 SH3GL3Q99963 347 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 PLCD4Q9BRC7 762 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 RNF14Q9UBS8 474 aa15.33■□□□□ 0.04
SF1-201ENST00000227503 BIN2Q9UBW5 565 aaPredicted RBP15.33■□□□□ 0.04
SF1-201ENST00000227503 KLHL33A6NCF5 533 aa15.32■□□□□ 0.04
SF1-201ENST00000227503 NQO1P15559 274 aaKnown RBP15.32■□□□□ 0.04
SF1-201ENST00000227503 NOVP48745 357 aa15.32■□□□□ 0.04
SF1-201ENST00000227503 TUBP50607 506 aa15.32■□□□□ 0.04
SF1-201ENST00000227503 RNASELQ05823 741 aaKnown RBP15.32■□□□□ 0.04
SF1-201ENST00000227503 ADCY2Q08462 1091 aa15.32■□□□□ 0.04
SF1-201ENST00000227503 ORC2Q13416 577 aaPredicted RBP15.32■□□□□ 0.04
SF1-201ENST00000227503 MKRN4PQ13434 485 aaPredicted RBP15.32■□□□□ 0.04
SF1-201ENST00000227503 C15orf52Q6ZUT6 534 aaKnown RBP15.32■□□□□ 0.04
SF1-201ENST00000227503 KSR1Q8IVT5 923 aa15.32■□□□□ 0.04
SF1-201ENST00000227503 ATXN2LQ8WWM7 1075 aaKnown RBP15.32■□□□□ 0.04
SF1-201ENST00000227503 CEP95Q96GE4 821 aa15.32■□□□□ 0.04
SF1-201ENST00000227503 ADAM7Q9H2U9 754 aa15.32■□□□□ 0.04
SF1-201ENST00000227503 VAT1LQ9HCJ6 419 aa15.32■□□□□ 0.04
SF1-201ENST00000227503 TMEM260Q9NX78 707 aa15.32■□□□□ 0.04
SF1-201ENST00000227503 PCDHGC5Q9Y5F6 944 aa15.32■□□□□ 0.04
SF1-201ENST00000227503 GPR75-ASB3A0A0A6YYF3 556 aa15.32■□□□□ 0.04
SF1-201ENST00000227503 EDIL3O43854 480 aa15.32■□□□□ 0.04
SF1-201ENST00000227503 RARAP10276 462 aa15.32■□□□□ 0.04
SF1-201ENST00000227503 CUL1Q13616 776 aa15.32■□□□□ 0.04
SF1-201ENST00000227503 TAX1BP1Q86VP1 789 aa15.32■□□□□ 0.04
SF1-201ENST00000227503 C3orf20Q8ND61 904 aa15.32■□□□□ 0.04
SF1-201ENST00000227503 CCDC26Q8TAB7 109 aa15.32■□□□□ 0.04
SF1-201ENST00000227503 PNMA5Q96PV4 448 aa15.32■□□□□ 0.04
SF1-201ENST00000227503 PIDD1Q9HB75 910 aa15.32■□□□□ 0.04
SF1-201ENST00000227503 CDK5RAP2Q96SN8 1893 aa15.31■□□□□ 0.04
SF1-201ENST00000227503 ESYT2A0FGR8 921 aa15.31■□□□□ 0.04
SF1-201ENST00000227503 MYMKA6NI61 221 aa15.31■□□□□ 0.04
SF1-201ENST00000227503 SOGA3Q5TF21 947 aa15.31■□□□□ 0.04
SF1-201ENST00000227503 REXO1Q8N1G1 1221 aaKnown RBP15.31■□□□□ 0.04
SF1-201ENST00000227503 SCFD2Q8WU76 684 aa15.31■□□□□ 0.04
SF1-201ENST00000227503 CALML4Q96GE6 196 aa15.31■□□□□ 0.04
SF1-201ENST00000227503 ETAA1Q9NY74 926 aa15.31■□□□□ 0.04
SF1-201ENST00000227503 SAMD15Q9P1V8 674 aa15.31■□□□□ 0.04
SF1-201ENST00000227503 SEC63Q9UGP8 760 aaKnown RBP15.31■□□□□ 0.04
SF1-201ENST00000227503 RTCBQ9Y3I0 505 aaKnown RBP15.31■□□□□ 0.04
SF1-201ENST00000227503 PDHA1P08559 390 aa15.31■□□□□ 0.04
SF1-201ENST00000227503 ACTN1P12814 892 aa15.31■□□□□ 0.04
SF1-201ENST00000227503 TXKP42681 527 aa15.31■□□□□ 0.04
SF1-201ENST00000227503 KLHL30Q0D2K2 578 aa15.31■□□□□ 0.04
SF1-201ENST00000227503 PRPF4BQ13523 1007 aaKnown RBP15.31■□□□□ 0.04
SF1-201ENST00000227503 ANKRD20A2Q5SQ80 823 aa15.31■□□□□ 0.04
SF1-201ENST00000227503 ANKRD20A1Q5TYW2 823 aa15.31■□□□□ 0.04
SF1-201ENST00000227503 ANKRD20A3Q5VUR7 823 aa15.31■□□□□ 0.04
SF1-201ENST00000227503 SV2BQ7L1I2 683 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms