RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 PARNO95453 639 aaKnown RBP14.24□□□□□ -0.13
LSM5-201ENST00000223084 OR52Z1P0C646 297 aa14.24□□□□□ -0.13
LSM5-201ENST00000223084 QARSP47897 775 aaKnown RBP14.24□□□□□ -0.13
LSM5-201ENST00000223084 TRAPPC10P48553 1259 aa14.24□□□□□ -0.13
LSM5-201ENST00000223084 PSMC5P62195 406 aa14.24□□□□□ -0.13
LSM5-201ENST00000223084 CYP4A11Q02928 519 aa14.24□□□□□ -0.13
LSM5-201ENST00000223084 MTERF2Q49AM1 385 aa14.24□□□□□ -0.13
LSM5-201ENST00000223084 FAM26DQ5JW98 314 aa14.24□□□□□ -0.13
LSM5-201ENST00000223084 RPAINQ86UA6 219 aa14.24□□□□□ -0.13
LSM5-201ENST00000223084 HSCBQ8IWL3 235 aa14.24□□□□□ -0.13
LSM5-201ENST00000223084 C4orf32Q8N8J7 132 aa14.24□□□□□ -0.13
LSM5-201ENST00000223084 SIP14410 1827 aa14.24□□□□□ -0.13
LSM5-201ENST00000223084 SMIM35A0A1B0GVV1 85 aa14.23□□□□□ -0.13
LSM5-201ENST00000223084 VPS37CA5D8V6 355 aaPredicted RBP14.23□□□□□ -0.13
LSM5-201ENST00000223084 ZBTB39O15060 712 aa14.23□□□□□ -0.13
LSM5-201ENST00000223084 P4HBP07237 508 aaKnown RBP14.23□□□□□ -0.13
LSM5-201ENST00000223084 GHRP10912 638 aa14.23□□□□□ -0.13
LSM5-201ENST00000223084 ACTN1P12814 892 aa14.23□□□□□ -0.13
LSM5-201ENST00000223084 TECP42680 631 aa14.23□□□□□ -0.13
LSM5-201ENST00000223084 CLCN3P51790 818 aa14.23□□□□□ -0.13
LSM5-201ENST00000223084 MRPS6P82932 125 aaKnown RBP14.23□□□□□ -0.13
LSM5-201ENST00000223084 TARBP2Q15633 366 aaKnown RBP14.23□□□□□ -0.13
LSM5-201ENST00000223084 XKR3Q5GH77 459 aa14.23□□□□□ -0.13
LSM5-201ENST00000223084 PLA2G4FQ68DD2 849 aa14.23□□□□□ -0.13
LSM5-201ENST00000223084 CNKSR3Q6P9H4 555 aa14.23□□□□□ -0.13
LSM5-201ENST00000223084 TPH2Q8IWU9 490 aa14.23□□□□□ -0.13
LSM5-201ENST00000223084 KIAA0319LQ8IZA0 1049 aa14.23□□□□□ -0.13
LSM5-201ENST00000223084 LRRC71Q8N4P6 559 aa14.23□□□□□ -0.13
LSM5-201ENST00000223084 METTL13Q8N6R0 699 aa14.23□□□□□ -0.13
LSM5-201ENST00000223084 DBF4BQ8NFT6 615 aa14.23□□□□□ -0.13
LSM5-201ENST00000223084 INTS4Q96HW7 963 aaKnown RBP14.23□□□□□ -0.13
LSM5-201ENST00000223084 PPP1R16BQ96T49 567 aa14.23□□□□□ -0.13
LSM5-201ENST00000223084 EIF2AK1Q9BQI3 630 aaKnown RBP14.23□□□□□ -0.13
LSM5-201ENST00000223084 LXNQ9BS40 222 aa14.23□□□□□ -0.13
LSM5-201ENST00000223084 NIFKQ9BYG3 293 aaKnown RBP14.23□□□□□ -0.13
LSM5-201ENST00000223084 MTIF3Q9H2K0 278 aaKnown RBP14.23□□□□□ -0.13
LSM5-201ENST00000223084 CEP131Q9UPN4 1083 aa14.23□□□□□ -0.13
LSM5-201ENST00000223084 SLC4A7Q9Y6M7 1214 aa14.23□□□□□ -0.13
LSM5-201ENST00000223084 A0A087WWV3 80 aa14.22□□□□□ -0.13
LSM5-201ENST00000223084 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.22□□□□□ -0.13
LSM5-201ENST00000223084 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.22□□□□□ -0.13
LSM5-201ENST00000223084 VTNP04004 478 aa14.22□□□□□ -0.13
LSM5-201ENST00000223084 SYT1P21579 422 aa14.22□□□□□ -0.13
LSM5-201ENST00000223084 NPEPPSP55786 919 aa14.22□□□□□ -0.13
LSM5-201ENST00000223084 PTGDRQ13258 359 aa14.22□□□□□ -0.13
LSM5-201ENST00000223084 ORC2Q13416 577 aaPredicted RBP14.22□□□□□ -0.13
LSM5-201ENST00000223084 PLEKHG4Q58EX7 1191 aa14.22□□□□□ -0.13
LSM5-201ENST00000223084 EFCAB12Q6NXP0 572 aa14.22□□□□□ -0.13
LSM5-201ENST00000223084 ANO5Q75V66 913 aa14.22□□□□□ -0.13
LSM5-201ENST00000223084 FERMT3Q86UX7 667 aa14.22□□□□□ -0.13
LSM5-201ENST00000223084 ZNF579Q8NAF0 562 aaKnown RBP14.22□□□□□ -0.13
LSM5-201ENST00000223084 CEP89Q96ST8 783 aa14.22□□□□□ -0.13
LSM5-201ENST00000223084 SUGCTQ9HAC7 445 aa14.22□□□□□ -0.13
LSM5-201ENST00000223084 CDHR5Q9HBB8 845 aa14.22□□□□□ -0.13
LSM5-201ENST00000223084 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.22□□□□□ -0.13
LSM5-201ENST00000223084 TRPV2Q9Y5S1 764 aa14.22□□□□□ -0.13
LSM5-201ENST00000223084 M0QZ92 97 aa14.21□□□□□ -0.13
LSM5-201ENST00000223084 MAGEB2O15479 319 aa14.21□□□□□ -0.13
LSM5-201ENST00000223084 SLITRK3O94933 977 aa14.21□□□□□ -0.13
LSM5-201ENST00000223084 PBX2P40425 430 aa14.21□□□□□ -0.13
LSM5-201ENST00000223084 RABGGTBP53611 331 aa14.21□□□□□ -0.13
LSM5-201ENST00000223084 SMAD3P84022 425 aaKnown RBP14.21□□□□□ -0.13
LSM5-201ENST00000223084 TBC1D8BQ0IIM8 1120 aa14.21□□□□□ -0.13
LSM5-201ENST00000223084 LPIN1Q14693 890 aa14.21□□□□□ -0.13
LSM5-201ENST00000223084 FBXO47Q5MNV8 452 aa14.21□□□□□ -0.13
LSM5-201ENST00000223084 IER5Q5VY09 327 aa14.21□□□□□ -0.13
LSM5-201ENST00000223084 Q7L0L9 218 aa14.21□□□□□ -0.13
LSM5-201ENST00000223084 TMCO2Q7Z6W1 182 aaPredicted RBP14.21□□□□□ -0.13
LSM5-201ENST00000223084 NME8Q8N427 588 aa14.21□□□□□ -0.13
LSM5-201ENST00000223084 LINC01465Q8N7H1 131 aa14.21□□□□□ -0.13
LSM5-201ENST00000223084 SPRYD3Q8NCJ5 442 aa14.21□□□□□ -0.13
LSM5-201ENST00000223084 ZNF668Q96K58 619 aaPredicted RBP14.21□□□□□ -0.13
LSM5-201ENST00000223084 HSD17B14Q9BPX1 270 aa14.21□□□□□ -0.13
LSM5-201ENST00000223084 CELF4Q9BZC1 486 aaKnown RBP14.21□□□□□ -0.13
LSM5-201ENST00000223084 GINS2Q9Y248 185 aa14.21□□□□□ -0.13
LSM5-201ENST00000223084 MYO9BQ13459 2157 aa14.21□□□□□ -0.13
LSM5-201ENST00000223084 A0A0C4DFX4 3053 aa14.21□□□□□ -0.13
LSM5-201ENST00000223084 MICAL3Q7RTP6 2002 aa14.2□□□□□ -0.14
LSM5-201ENST00000223084 DKC1O60832 514 aaKnown RBP eCLIP14.2□□□□□ -0.14
LSM5-201ENST00000223084 ATP2A2P16615 1042 aaKnown RBP14.2□□□□□ -0.14
LSM5-201ENST00000223084 PDCP20941 246 aa14.2□□□□□ -0.14
LSM5-201ENST00000223084 WDR5P61964 334 aaKnown RBP14.2□□□□□ -0.14
LSM5-201ENST00000223084 DEFB103AP81534 67 aa14.2□□□□□ -0.14
LSM5-201ENST00000223084 DRP2Q13474 957 aa14.2□□□□□ -0.14
LSM5-201ENST00000223084 IKBKEQ14164 716 aa14.2□□□□□ -0.14
LSM5-201ENST00000223084 RILPL1Q5EBL4 403 aa14.2□□□□□ -0.14
LSM5-201ENST00000223084 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.2□□□□□ -0.141e-10■■■□□ 17.1
LSM5-201ENST00000223084 C4orf19Q8IY42 314 aa14.2□□□□□ -0.14
LSM5-201ENST00000223084 SEPT8Q92599 483 aa14.2□□□□□ -0.14
LSM5-201ENST00000223084 CEP170P1Q96L14 293 aa14.2□□□□□ -0.14
LSM5-201ENST00000223084 PBX4Q9BYU1 374 aa14.2□□□□□ -0.14
LSM5-201ENST00000223084 IFIH1Q9BYX4 1025 aaKnown RBP14.2□□□□□ -0.14
LSM5-201ENST00000223084 ZSWIM4Q9H7M6 989 aa14.2□□□□□ -0.14
LSM5-201ENST00000223084 AGO3Q9H9G7 860 aaKnown RBP14.2□□□□□ -0.14
LSM5-201ENST00000223084 CYP26B1Q9NR63 512 aa14.2□□□□□ -0.14
LSM5-201ENST00000223084 AKT3Q9Y243 479 aa14.2□□□□□ -0.14
LSM5-201ENST00000223084 GBF1Q92538 1859 aa14.2□□□□□ -0.14
LSM5-201ENST00000223084 PTPRSQ13332 1948 aa14.19□□□□□ -0.14
LSM5-201ENST00000223084 ABHD14A-ACY1A0A1B0GW23 586 aa14.19□□□□□ -0.14
LSM5-201ENST00000223084 MED24O75448 989 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms