RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 C9orf50Q5SZB4 431 aa16.45■□□□□ 0.22
PCOLCE-201ENST00000223061 TRAF7Q6Q0C0 670 aa16.45■□□□□ 0.22
PCOLCE-201ENST00000223061 C16orf59Q7L2K0 433 aa16.45■□□□□ 0.22
PCOLCE-201ENST00000223061 C4orf19Q8IY42 314 aa16.45■□□□□ 0.22
PCOLCE-201ENST00000223061 RAB34Q9BZG1 259 aa16.45■□□□□ 0.22
PCOLCE-201ENST00000223061 A0A087WWV3 80 aa16.44■□□□□ 0.22
PCOLCE-201ENST00000223061 VWA3AA6NCI4 1184 aa16.44■□□□□ 0.22
PCOLCE-201ENST00000223061 ZBTB39O15060 712 aa16.44■□□□□ 0.22
PCOLCE-201ENST00000223061 CAND2O75155 1236 aa16.44■□□□□ 0.22
PCOLCE-201ENST00000223061 MED24O75448 989 aa16.44■□□□□ 0.22
PCOLCE-201ENST00000223061 PDIA4P13667 645 aaKnown RBP16.44■□□□□ 0.22
PCOLCE-201ENST00000223061 RFC2P35250 354 aa16.44■□□□□ 0.22
PCOLCE-201ENST00000223061 NPEPPSP55786 919 aa16.44■□□□□ 0.22
PCOLCE-201ENST00000223061 TBC1D8BQ0IIM8 1120 aa16.44■□□□□ 0.22
PCOLCE-201ENST00000223061 TARBP2Q15633 366 aaKnown RBP16.44■□□□□ 0.22
PCOLCE-201ENST00000223061 FOXD4L6Q3SYB3 417 aaPredicted RBP16.44■□□□□ 0.22
PCOLCE-201ENST00000223061 FOXD4L3Q6VB84 417 aaPredicted RBP16.44■□□□□ 0.22
PCOLCE-201ENST00000223061 LRRC71Q8N4P6 559 aa16.44■□□□□ 0.22
PCOLCE-201ENST00000223061 SMIM35A0A1B0GVV1 85 aa16.43■□□□□ 0.22
PCOLCE-201ENST00000223061 PP2D1A8MPX8 630 aa16.43■□□□□ 0.22
PCOLCE-201ENST00000223061 BMP15O95972 392 aa16.43■□□□□ 0.22
PCOLCE-201ENST00000223061 SPATA31C1P0DKV0 1188 aa16.43■□□□□ 0.22
PCOLCE-201ENST00000223061 CLCN3P51790 818 aa16.43■□□□□ 0.22
PCOLCE-201ENST00000223061 PDIA5Q14554 519 aa16.43■□□□□ 0.22
PCOLCE-201ENST00000223061 MBTPS1Q14703 1052 aa16.43■□□□□ 0.22
PCOLCE-201ENST00000223061 SHHQ15465 462 aa16.43■□□□□ 0.22
PCOLCE-201ENST00000223061 ZNF365Q70YC5 407 aa16.43■□□□□ 0.22
PCOLCE-201ENST00000223061 CATSPER3Q86XQ3 398 aa16.43■□□□□ 0.22
PCOLCE-201ENST00000223061 RPUSD2Q8IZ73 545 aaKnown RBP16.43■□□□□ 0.22
PCOLCE-201ENST00000223061 IGSF22Q8N9C0 903 aa16.43■□□□□ 0.22
PCOLCE-201ENST00000223061 ZNF579Q8NAF0 562 aaKnown RBP16.43■□□□□ 0.22
PCOLCE-201ENST00000223061 CEP170P1Q96L14 293 aa16.43■□□□□ 0.22
PCOLCE-201ENST00000223061 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.43■□□□□ 0.221e-6■□□□□ 8.2
PCOLCE-201ENST00000223061 SUGCTQ9HAC7 445 aa16.43■□□□□ 0.22
PCOLCE-201ENST00000223061 TUFT1Q9NNX1 390 aa16.43■□□□□ 0.22
PCOLCE-201ENST00000223061 CYP26B1Q9NR63 512 aa16.43■□□□□ 0.22
PCOLCE-201ENST00000223061 MAGEB2O15479 319 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 NBNO60934 754 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 F13A1P00488 732 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 CHRNA1P02708 482 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 CDC25AP30304 524 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 CCT6AP40227 531 aaKnown RBP16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 MRPS6P82932 125 aaKnown RBP16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 GPNMBQ14956 572 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 XKR9Q5GH70 373 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 ARL6IP4Q66PJ3 421 aaKnown RBP16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 HAUS3Q68CZ6 603 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 EFCAB12Q6NXP0 572 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 PSRC1Q6PGN9 363 aaPredicted RBP16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 POTEGQ6S5H5 508 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 OTUD6AQ7L8S5 288 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 RPAINQ86UA6 219 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 KIAA0319LQ8IZA0 1049 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 TDHQ8IZJ6 230 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 SNX29Q8TEQ0 813 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 PIGOQ8TEQ8 1089 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 VWCEQ96DN2 955 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 USP28Q96RU2 1077 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 PPP1R16BQ96T49 567 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 POLR3CQ9BUI4 534 aaPredicted RBP16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 DAXXQ9UER7 740 aaPredicted RBP16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 CDY2AQ9Y6F7 541 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 TRIP12Q14669 1992 aaPredicted RBP16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 LYPLA2O95372 231 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 RPA1P27694 616 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 TMEM240Q5SV17 173 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 OTOP2Q7RTS6 562 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 CCDC43Q96MW1 224 aaKnown RBP16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 CEP89Q96ST8 783 aa16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 BMP2KQ9NSY1 1161 aaPredicted RBP16.42■□□□□ 0.22
PCOLCE-201ENST00000223061 M0QZ92 97 aa16.41■□□□□ 0.22
PCOLCE-201ENST00000223061 PARNO95453 639 aaKnown RBP16.41■□□□□ 0.22
PCOLCE-201ENST00000223061 FGBP02675 491 aa16.41■□□□□ 0.22
PCOLCE-201ENST00000223061 VTNP04004 478 aa16.41■□□□□ 0.22
PCOLCE-201ENST00000223061 RPLP2P05387 115 aaKnown RBP16.41■□□□□ 0.22
PCOLCE-201ENST00000223061 PFKMP08237 780 aa16.41■□□□□ 0.22
PCOLCE-201ENST00000223061 TMOD1P28289 359 aa16.41■□□□□ 0.22
PCOLCE-201ENST00000223061 MARCKSP29966 332 aaPredicted RBP16.41■□□□□ 0.22
PCOLCE-201ENST00000223061 MGAT3Q09327 533 aa16.41■□□□□ 0.22
PCOLCE-201ENST00000223061 PTPAQ15257 358 aa16.41■□□□□ 0.22
PCOLCE-201ENST00000223061 ZRSR1Q15695 479 aaKnown RBP16.41■□□□□ 0.22
PCOLCE-201ENST00000223061 FAM26DQ5JW98 314 aa16.41■□□□□ 0.22
PCOLCE-201ENST00000223061 IER5Q5VY09 327 aa16.41■□□□□ 0.22
PCOLCE-201ENST00000223061 KRT79Q5XKE5 535 aa16.41■□□□□ 0.22
PCOLCE-201ENST00000223061 RNPC3Q96LT9 517 aaKnown RBP16.41■□□□□ 0.22
PCOLCE-201ENST00000223061 OSBPL7Q9BZF2 842 aa16.41■□□□□ 0.22
PCOLCE-201ENST00000223061 TFIP11Q9UBB9 837 aaKnown RBP16.41■□□□□ 0.22
PCOLCE-201ENST00000223061 AKT3Q9Y243 479 aa16.41■□□□□ 0.22
PCOLCE-201ENST00000223061 GINS2Q9Y248 185 aa16.41■□□□□ 0.22
PCOLCE-201ENST00000223061 POLGP54098 1239 aaPredicted RBP16.4■□□□□ 0.22
PCOLCE-201ENST00000223061 DRP2Q13474 957 aa16.4■□□□□ 0.22
PCOLCE-201ENST00000223061 ECM1Q16610 540 aa16.4■□□□□ 0.22
PCOLCE-201ENST00000223061 NME8Q8N427 588 aa16.4■□□□□ 0.22
PCOLCE-201ENST00000223061 ZNF396Q96N95 335 aaPredicted RBP16.4■□□□□ 0.22
PCOLCE-201ENST00000223061 MAP7D2Q96T17 732 aa16.4■□□□□ 0.22
PCOLCE-201ENST00000223061 TRPV2Q9Y5S1 764 aa16.4■□□□□ 0.22
PCOLCE-201ENST00000223061 STK24Q9Y6E0 443 aa16.4■□□□□ 0.22
PCOLCE-201ENST00000223061 MYH9P35579 1960 aaKnown RBP16.4■□□□□ 0.22
PCOLCE-201ENST00000223061 MAFO75444 373 aaPredicted RBP16.39■□□□□ 0.21
PCOLCE-201ENST00000223061 CXCL10P02778 98 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms