RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 VPS39Q96JC1 886 aa16.06■□□□□ 0.16
NDFIP2-201ENST00000218652 FAM167BQ9BTA0 163 aa16.06■□□□□ 0.16
NDFIP2-201ENST00000218652 MED7O43513 233 aa16.06■□□□□ 0.16
NDFIP2-201ENST00000218652 BNIP3LO60238 219 aa16.06■□□□□ 0.16
NDFIP2-201ENST00000218652 PMLP29590 882 aa16.06■□□□□ 0.16
NDFIP2-201ENST00000218652 GCLMP48507 274 aa16.06■□□□□ 0.16
NDFIP2-201ENST00000218652 HABP4Q5JVS0 413 aaKnown RBP16.06■□□□□ 0.16
NDFIP2-201ENST00000218652 NOP9Q86U38 636 aaKnown RBP16.06■□□□□ 0.16
NDFIP2-201ENST00000218652 RNF217Q8TC41 542 aa16.06■□□□□ 0.16
NDFIP2-201ENST00000218652 CNKSR1Q969H4 720 aa16.06■□□□□ 0.16
NDFIP2-201ENST00000218652 YIPF3Q9GZM5 350 aa16.06■□□□□ 0.16
NDFIP2-201ENST00000218652 SLC24A3Q9HC58 644 aa16.06■□□□□ 0.16
NDFIP2-201ENST00000218652 TTC26A0AVF1 554 aa16.06■□□□□ 0.16
NDFIP2-201ENST00000218652 NCK2O43639 380 aa16.06■□□□□ 0.16
NDFIP2-201ENST00000218652 MARCH10Q8NA82 808 aaPredicted RBP16.06■□□□□ 0.16
NDFIP2-201ENST00000218652 NLRP4Q96MN2 994 aa16.06■□□□□ 0.16
NDFIP2-201ENST00000218652 ADGRG1Q9Y653 693 aa16.06■□□□□ 0.16
NDFIP2-201ENST00000218652 DCTN3O75935 186 aa16.05■□□□□ 0.16
NDFIP2-201ENST00000218652 BRAFP15056 766 aa16.05■□□□□ 0.16
NDFIP2-201ENST00000218652 GLE1Q53GS7 698 aaKnown RBP16.05■□□□□ 0.16
NDFIP2-201ENST00000218652 ST13P4Q8IZP2 240 aaPredicted RBP16.05■□□□□ 0.16
NDFIP2-201ENST00000218652 HSPH1Q92598 858 aa16.05■□□□□ 0.16
NDFIP2-201ENST00000218652 WARS2Q9UGM6 360 aaKnown RBP16.05■□□□□ 0.16
NDFIP2-201ENST00000218652 SPAG7O75391 227 aa16.05■□□□□ 0.16
NDFIP2-201ENST00000218652 PSMA2P25787 234 aa16.05■□□□□ 0.16
NDFIP2-201ENST00000218652 MYO1EQ12965 1108 aa16.05■□□□□ 0.16
NDFIP2-201ENST00000218652 CDC37Q16543 378 aaPredicted RBP16.05■□□□□ 0.16
NDFIP2-201ENST00000218652 MIGA2Q7L4E1 593 aa16.05■□□□□ 0.16
NDFIP2-201ENST00000218652 EXOC8Q8IYI6 725 aa16.05■□□□□ 0.16
NDFIP2-201ENST00000218652 SIX6OS1Q8N1H7 587 aa16.05■□□□□ 0.16
NDFIP2-201ENST00000218652 RNF25Q96BH1 459 aaPredicted RBP16.05■□□□□ 0.16
NDFIP2-201ENST00000218652 FAF2Q96CS3 445 aa16.05■□□□□ 0.16
NDFIP2-201ENST00000218652 BTBD6Q96KE9 485 aa16.05■□□□□ 0.16
NDFIP2-201ENST00000218652 FMR1NBQ8N0W7 255 aaPredicted RBP16.05■□□□□ 0.16
NDFIP2-201ENST00000218652 MID2Q9UJV3 735 aa16.05■□□□□ 0.16
NDFIP2-201ENST00000218652 HEY1Q9Y5J3 304 aa16.05■□□□□ 0.16
NDFIP2-201ENST00000218652 GMNCA6NCL1 334 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 ARPP19P56211 112 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 LRRC14Q15048 493 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 ERFEQ4G0M1 354 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 FAM83BQ5T0W9 1011 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 PPP1R2P3Q6NXS1 205 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 UNC13DQ70J99 1090 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 DGKHQ86XP1 1220 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 PASD1Q8IV76 773 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 TTC1Q99614 292 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 IRX2Q9BZI1 471 aaPredicted RBP16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 GOLPH3LQ9H4A5 285 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 ETNK1Q9HBU6 452 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 FGFR1OP2Q9NVK5 253 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 ANO9A1A5B4 782 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 MIF4GDA9UHW6 222 aaKnown RBP16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 MECOMQ03112 1051 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 KCNH2Q12809 1159 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 SYDE2Q5VT97 1194 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 ARHGEF25Q86VW2 580 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 CDHR1Q96JP9 859 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 YY1AP1Q9H869 796 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 TRPC5Q9UL62 973 aaPredicted RBP16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 CSPG5O95196 566 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 CDK8P49336 464 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 ZNF746Q6NUN9 644 aaPredicted RBP16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 PPP4R3CPQ6ZMV5 832 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 FBXL13Q8NEE6 735 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 SAAL1Q96ER3 474 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 NRBF2Q96F24 287 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 ATG3Q9NT62 314 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 LAMC3Q9Y6N6 1575 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 MCAMP43121 646 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 NLGN1Q8N2Q7 840 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 OXER1Q8TDS5 423 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 C11orf70Q9BRQ4 267 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 MSTO1Q9BUK6 570 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 STOML1Q9UBI4 398 aa16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 ADD3Q9UEY8 706 aaKnown RBP16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 APOBEC2Q9Y235 224 aaKnown RBP16.04■□□□□ 0.16
NDFIP2-201ENST00000218652 TYW5A2RUC4 315 aaKnown RBP16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 hCG_1984214I3L0E3 225 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 TJP3O95049 919 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 KITP10721 976 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 ERFP50548 548 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 ARL4CP56559 192 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 NBPF9Q3BBW0 867 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 FAM182BQ5T319 152 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 FAM196AQ6ZSG2 479 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 ZNF713Q8N859 430 aaPredicted RBP16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 OSBPL5Q9H0X9 879 aaPredicted RBP16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 VPS11Q9H270 941 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 RAD17O75943 681 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 MDM2Q00987 491 aaPredicted RBP16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 MIS18BP1Q6P0N0 1132 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 SFR1Q86XK3 245 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 LRRC37BQ96QE4 947 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 SUCLA2Q9P2R7 463 aaPredicted RBP16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 PI4KBQ9UBF8 816 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 E9PMD0 336 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 KRT38O76015 456 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 IGSF1Q8N6C5 1336 aa16.03■□□□□ 0.16
NDFIP2-201ENST00000218652 PPM1NQ8N819 430 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms