RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 GAP43P17677 238 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 ECHS1P30084 290 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 LSP1P33241 339 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 MMP14P50281 582 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 SCNN1DP51172 638 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 TTC19Q6DKK2 380 aaPredicted RBP14.53□□□□□ -0.08
SRP54-201ENST00000216774 H2AFVQ71UI9 128 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 RASGEF1CQ8N431 466 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 RNPC3Q96LT9 517 aaKnown RBP14.53□□□□□ -0.08
SRP54-201ENST00000216774 P2RX7Q99572 595 aaKnown RBP14.53□□□□□ -0.08
SRP54-201ENST00000216774 PAGR1Q9BTK6 254 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 EPN3Q9H201 632 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 GCNT4Q9P109 453 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 VAV3Q9UKW4 847 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 PLAAQ9Y263 795 aa14.53□□□□□ -0.08
SRP54-201ENST00000216774 FAM86B1E9PN63 330 aa14.52□□□□□ -0.08
SRP54-201ENST00000216774 EYA4O95677 639 aa14.52□□□□□ -0.08
SRP54-201ENST00000216774 FAM86B2P0C5J1 330 aa14.52□□□□□ -0.08
SRP54-201ENST00000216774 ATP1A2P50993 1020 aa14.52□□□□□ -0.08
SRP54-201ENST00000216774 DDR1Q08345 913 aa14.52□□□□□ -0.08
SRP54-201ENST00000216774 NFIAQ12857 509 aa14.52□□□□□ -0.08
SRP54-201ENST00000216774 HLTFQ14527 1009 aaKnown RBP eCLIP14.52□□□□□ -0.08
SRP54-201ENST00000216774 TRADDQ15628 312 aa14.52□□□□□ -0.08
SRP54-201ENST00000216774 NFIL3Q16649 462 aa14.52□□□□□ -0.08
SRP54-201ENST00000216774 PEX26Q7Z412 305 aa14.52□□□□□ -0.08
SRP54-201ENST00000216774 SLITRK6Q9H5Y7 841 aa14.52□□□□□ -0.08
SRP54-201ENST00000216774 STXBP5LQ9Y2K9 1186 aa14.52□□□□□ -0.08
SRP54-201ENST00000216774 POLRMTO00411 1230 aaKnown RBP14.52□□□□□ -0.09
SRP54-201ENST00000216774 EIF3DO15371 548 aaKnown RBP eCLIP14.52□□□□□ -0.09
SRP54-201ENST00000216774 SART1O43290 800 aaKnown RBP14.52□□□□□ -0.09
SRP54-201ENST00000216774 RAD21O60216 631 aa14.52□□□□□ -0.09
SRP54-201ENST00000216774 PPP1R37O75864 691 aa14.52□□□□□ -0.09
SRP54-201ENST00000216774 CERKLQ49MI3 558 aaPredicted RBP14.52□□□□□ -0.09
SRP54-201ENST00000216774 TCERG1LQ5VWI1 586 aa14.52□□□□□ -0.09
SRP54-201ENST00000216774 FBXO11Q86XK2 927 aa14.52□□□□□ -0.09
SRP54-201ENST00000216774 METTL13Q8N6R0 699 aa14.52□□□□□ -0.09
SRP54-201ENST00000216774 GMCL1P1Q8NEA9 526 aa14.52□□□□□ -0.09
SRP54-201ENST00000216774 GMCL1Q96IK5 515 aa14.52□□□□□ -0.09
SRP54-201ENST00000216774 TMBIM4Q9HC24 238 aa14.52□□□□□ -0.09
SRP54-201ENST00000216774 NOC2LQ9Y3T9 749 aaKnown RBP14.52□□□□□ -0.09
SRP54-201ENST00000216774 MSH4O15457 936 aa14.51□□□□□ -0.09
SRP54-201ENST00000216774 PPP1R12BO60237 982 aaPredicted RBP14.51□□□□□ -0.09
SRP54-201ENST00000216774 ERLIN2O94905 339 aa14.51□□□□□ -0.09
SRP54-201ENST00000216774 GCNT3O95395 438 aa14.51□□□□□ -0.09
SRP54-201ENST00000216774 ITGB3BPQ13352 177 aaPredicted RBP14.51□□□□□ -0.09
SRP54-201ENST00000216774 SLC15A2Q16348 729 aa14.51□□□□□ -0.09
SRP54-201ENST00000216774 CEP85LQ5SZL2 805 aa14.51□□□□□ -0.09
SRP54-201ENST00000216774 MAATS1Q7Z4T9 603 aa14.51□□□□□ -0.09
SRP54-201ENST00000216774 ARFGAP2Q8N6H7 521 aa14.51□□□□□ -0.09
SRP54-201ENST00000216774 BORCS6Q96GS4 357 aa14.51□□□□□ -0.09
SRP54-201ENST00000216774 ZDHHC15Q96MV8 337 aa14.51□□□□□ -0.09
SRP54-201ENST00000216774 RUSC1Q9BVN2 902 aa14.51□□□□□ -0.09
SRP54-201ENST00000216774 BHMT2Q9H2M3 363 aa14.51□□□□□ -0.09
SRP54-201ENST00000216774 PI4KBQ9UBF8 816 aa14.51□□□□□ -0.09
SRP54-201ENST00000216774 RABGAP1Q9Y3P9 1069 aa14.51□□□□□ -0.09
SRP54-201ENST00000216774 ADAMTSL1Q8N6G6 1762 aa14.51□□□□□ -0.09
SRP54-201ENST00000216774 GCOM1H8Y6P7 765 aaPredicted RBP14.5□□□□□ -0.09
SRP54-201ENST00000216774 KRIT1O00522 736 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 DDX3XO00571 662 aaKnown RBP eCLIP14.5□□□□□ -0.092e-11■■■□□ 16.3
SRP54-201ENST00000216774 CYP3A4P08684 503 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 MYZAPP0CAP1 466 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 HSD17B3P37058 310 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 MDH1P40925 334 aaKnown RBP14.5□□□□□ -0.09
SRP54-201ENST00000216774 STAT1P42224 750 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 CRKP46108 304 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 MTMR3Q13615 1198 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 FMNL3Q8IVF7 1028 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 TEX2Q8IWB9 1127 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 ZFPM1Q8IX07 1006 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 MICALL1Q8N3F8 863 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 HES6Q96HZ4 224 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 USP21Q9UK80 565 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 TTC7AQ9ULT0 858 aaPredicted RBP14.5□□□□□ -0.09
SRP54-201ENST00000216774 SIPA1L1O43166 1804 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 TMCO5BA8MYB1 307 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 RSPH10B2B2RC85 870 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 H0YGN5 161 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 RSPH10BP0C881 870 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 CASP4P49662 377 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 GUCY1A3Q02108 690 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 ICA1Q05084 483 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 BIRC3Q13489 604 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 PTGISQ16647 500 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 TATDN1Q6P1N9 297 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 TMEM179Q6ZVK1 233 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 MICALCLQ6ZW33 695 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 NT5DC3Q86UY8 548 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 SIAH1Q8IUQ4 282 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 CCDC26Q8TAB7 109 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 SEC14L1Q92503 715 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 EIF2AK1Q9BQI3 630 aaKnown RBP14.5□□□□□ -0.09
SRP54-201ENST00000216774 MKNK1Q9BUB5 465 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 MRIQ9BWK5 157 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 GOLPH3Q9H4A6 298 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 RABEP2Q9H5N1 569 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 AJAP1Q9UKB5 411 aaPredicted RBP14.5□□□□□ -0.09
SRP54-201ENST00000216774 DAAM1Q9Y4D1 1078 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 NFS1Q9Y697 457 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 NCANO14594 1321 aa14.5□□□□□ -0.09
SRP54-201ENST00000216774 F5H6K3 240 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms