RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 TRIM65Q6PJ69 517 aa19.16■□□□□ 0.66
VRK1-201ENST00000216639 ZNF720Q7Z2F6 126 aa19.16■□□□□ 0.66
VRK1-201ENST00000216639 ARMC9Q7Z3E5 817 aa19.16■□□□□ 0.66
VRK1-201ENST00000216639 POLD4Q9HCU8 107 aa19.16■□□□□ 0.66
VRK1-201ENST00000216639 ANKEF1Q9NU02 776 aa19.16■□□□□ 0.66
VRK1-201ENST00000216639 ARMCX3Q9UH62 379 aaPredicted RBP19.16■□□□□ 0.66
VRK1-201ENST00000216639 PTPRFP10586 1907 aa19.16■□□□□ 0.66
VRK1-201ENST00000216639 LOC285556D6RIA3 1793 aa19.16■□□□□ 0.66
VRK1-201ENST00000216639 ASTN1O14525 1302 aa19.15■□□□□ 0.66
VRK1-201ENST00000216639 GLTPD2A6NH11 291 aa19.15■□□□□ 0.66
VRK1-201ENST00000216639 CCNE2O96020 404 aa19.15■□□□□ 0.66
VRK1-201ENST00000216639 MAPTP10636 758 aaKnown RBP19.15■□□□□ 0.66
VRK1-201ENST00000216639 EPB41P11171 864 aaKnown RBP19.15■□□□□ 0.66
VRK1-201ENST00000216639 CDK17Q00537 523 aa19.15■□□□□ 0.66
VRK1-201ENST00000216639 PPIL2Q13356 520 aa19.15■□□□□ 0.66
VRK1-201ENST00000216639 HS2ST1Q7LGA3 356 aa19.15■□□□□ 0.66
VRK1-201ENST00000216639 GOLGA5Q8TBA6 731 aa19.15■□□□□ 0.66
VRK1-201ENST00000216639 FAM207AQ9NSI2 230 aaPredicted RBP19.15■□□□□ 0.66
VRK1-201ENST00000216639 EPN1Q9Y6I3 576 aaPredicted RBP19.15■□□□□ 0.66
VRK1-201ENST00000216639 NDUFA10O95299 355 aa19.14■□□□□ 0.66
VRK1-201ENST00000216639 ERCC3P19447 782 aa19.14■□□□□ 0.66
VRK1-201ENST00000216639 CYLC1P35663 651 aaPredicted RBP19.14■□□□□ 0.66
VRK1-201ENST00000216639 GNG11P61952 73 aa19.14■□□□□ 0.66
VRK1-201ENST00000216639 STXBP2Q15833 593 aa19.14■□□□□ 0.66
VRK1-201ENST00000216639 ARHGAP29Q52LW3 1261 aa19.14■□□□□ 0.66
VRK1-201ENST00000216639 CCDC170Q8IYT3 715 aa19.14■□□□□ 0.66
VRK1-201ENST00000216639 ATP6V0A1Q93050 837 aa19.14■□□□□ 0.66
VRK1-201ENST00000216639 DRC1Q96MC2 740 aa19.14■□□□□ 0.66
VRK1-201ENST00000216639 KCNH4Q9UQ05 1017 aa19.14■□□□□ 0.66
VRK1-201ENST00000216639 A0A0G2JMZ2 1700 aa19.14■□□□□ 0.65
VRK1-201ENST00000216639 IPO7O95373 1038 aaKnown RBP19.14■□□□□ 0.65
VRK1-201ENST00000216639 PSAPP07602 524 aa19.14■□□□□ 0.65
VRK1-201ENST00000216639 KCNA2P16389 499 aa19.14■□□□□ 0.65
VRK1-201ENST00000216639 GPR162Q16538 588 aa19.14■□□□□ 0.65
VRK1-201ENST00000216639 WDR59Q6PJI9 974 aa19.14■□□□□ 0.65
VRK1-201ENST00000216639 OTUD6AQ7L8S5 288 aa19.14■□□□□ 0.65
VRK1-201ENST00000216639 CACNA2D4Q7Z3S7 1137 aa19.14■□□□□ 0.65
VRK1-201ENST00000216639 SLC17A8Q8NDX2 589 aa19.14■□□□□ 0.65
VRK1-201ENST00000216639 CHP1Q99653 195 aa19.14■□□□□ 0.65
VRK1-201ENST00000216639 SPATC1LQ9H0A9 340 aa19.14■□□□□ 0.65
VRK1-201ENST00000216639 NUCKS1Q9H1E3 243 aaKnown RBP19.14■□□□□ 0.65
VRK1-201ENST00000216639 JPH1Q9HDC5 661 aaPredicted RBP19.14■□□□□ 0.65
VRK1-201ENST00000216639 AGTPBP1Q9UPW5 1226 aa19.14■□□□□ 0.65
VRK1-201ENST00000216639 SPATA31C2B4DYI2 1134 aa19.13■□□□□ 0.65
VRK1-201ENST00000216639 KIF5CO60282 957 aa19.13■□□□□ 0.65
VRK1-201ENST00000216639 EIF3JO75822 258 aaKnown RBP19.13■□□□□ 0.65
VRK1-201ENST00000216639 XRCC5P13010 732 aaKnown RBP19.13■□□□□ 0.65
VRK1-201ENST00000216639 CASQ1P31415 396 aa19.13■□□□□ 0.65
VRK1-201ENST00000216639 COPB2P35606 906 aa19.13■□□□□ 0.65
VRK1-201ENST00000216639 KRT83P78385 493 aa19.13■□□□□ 0.65
VRK1-201ENST00000216639 MAPK7Q13164 816 aa19.13■□□□□ 0.65
VRK1-201ENST00000216639 EAPPQ56P03 285 aaPredicted RBP19.13■□□□□ 0.65
VRK1-201ENST00000216639 FASTKD5Q7L8L6 764 aaKnown RBP19.13■□□□□ 0.65
VRK1-201ENST00000216639 CLMNQ96JQ2 1002 aa19.13■□□□□ 0.65
VRK1-201ENST00000216639 FIZ1Q96SL8 496 aa19.13■□□□□ 0.65
VRK1-201ENST00000216639 GBP3Q9H0R5 595 aa19.13■□□□□ 0.65
VRK1-201ENST00000216639 LZTFL1Q9NQ48 299 aa19.13■□□□□ 0.65
VRK1-201ENST00000216639 BTBD7Q9P203 1132 aa19.13■□□□□ 0.65
VRK1-201ENST00000216639 SLC9A2Q9UBY0 812 aa19.13■□□□□ 0.65
VRK1-201ENST00000216639 K7ENM7 598 aa19.12■□□□□ 0.65
VRK1-201ENST00000216639 TGFB1I1O43294 461 aa19.12■□□□□ 0.65
VRK1-201ENST00000216639 CTIFO43310 598 aaKnown RBP19.12■□□□□ 0.65
VRK1-201ENST00000216639 USO1O60763 962 aaKnown RBP19.12■□□□□ 0.65
VRK1-201ENST00000216639 PLS3P13797 630 aa19.12■□□□□ 0.65
VRK1-201ENST00000216639 HNRNPH3P31942 346 aaKnown RBP19.12■□□□□ 0.65
VRK1-201ENST00000216639 KCNH2Q12809 1159 aa19.12■□□□□ 0.65
VRK1-201ENST00000216639 ZC2HC1CQ53FD0 456 aaPredicted RBP19.12■□□□□ 0.65
VRK1-201ENST00000216639 XKR9Q5GH70 373 aa19.12■□□□□ 0.65
VRK1-201ENST00000216639 PNMA8AQ86V59 439 aaPredicted RBP19.12■□□□□ 0.65
VRK1-201ENST00000216639 NCAPG2Q86XI2 1143 aa19.12■□□□□ 0.65
VRK1-201ENST00000216639 ACRBPQ8NEB7 543 aa19.12■□□□□ 0.65
VRK1-201ENST00000216639 SMCR8Q8TEV9 937 aaPredicted RBP19.12■□□□□ 0.65
VRK1-201ENST00000216639 MKNK1Q9BUB5 465 aa19.12■□□□□ 0.65
VRK1-201ENST00000216639 BCAS3Q9H6U6 928 aa19.12■□□□□ 0.65
VRK1-201ENST00000216639 TMEM206Q9H813 350 aa19.12■□□□□ 0.65
VRK1-201ENST00000216639 PLAGL2Q9UPG8 496 aa19.12■□□□□ 0.65
VRK1-201ENST00000216639 RGS20O76081 388 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 SLC25A27O95847 323 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 AFPP02771 609 aaKnown RBP19.11■□□□□ 0.65
VRK1-201ENST00000216639 OSBPP22059 807 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 PSMC2P35998 433 aaKnown RBP19.11■□□□□ 0.65
VRK1-201ENST00000216639 HERVK_113P62684 666 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 KCNA1Q09470 495 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 KCNMA1Q12791 1236 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 UGCGQ16739 394 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 SYCP3Q8IZU3 236 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 DAW1Q8N136 415 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 MPHOSPH6Q99547 160 aaKnown RBP19.11■□□□□ 0.65
VRK1-201ENST00000216639 ASCC2Q9H1I8 757 aaPredicted RBP19.11■□□□□ 0.65
VRK1-201ENST00000216639 TAF1DQ9H5J8 278 aaPredicted RBP19.11■□□□□ 0.65
VRK1-201ENST00000216639 L2HGDHQ9H9P8 463 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 CEP72Q9P209 647 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 ZMYM2Q9UBW7 1377 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 POTEB2H3BUK9 544 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 BACH1O14867 736 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 CLIC2O15247 247 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 AKAP3O75969 853 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 ICAM3P32942 547 aa19.11■□□□□ 0.65
VRK1-201ENST00000216639 ALDH5A1P51649 535 aaPredicted RBP19.11■□□□□ 0.65
VRK1-201ENST00000216639 MIS18BP1Q6P0N0 1132 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms