RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 IL9P15248 144 aa17.01■□□□□ 0.31
UPK3A-201ENST00000216211 IBSPP21815 317 aaPredicted RBP17.01■□□□□ 0.31
UPK3A-201ENST00000216211 PSMA5P28066 241 aa17.01■□□□□ 0.31
UPK3A-201ENST00000216211 PRR16Q569H4 304 aa17.01■□□□□ 0.31
UPK3A-201ENST00000216211 PTCRAQ6ISU1 281 aaPredicted RBP17.01■□□□□ 0.31
UPK3A-201ENST00000216211 ZNF746Q6NUN9 644 aaPredicted RBP17.01■□□□□ 0.31
UPK3A-201ENST00000216211 TRMT1LQ7Z2T5 733 aaKnown RBP17.01■□□□□ 0.31
UPK3A-201ENST00000216211 NPAS4Q8IUM7 802 aa17.01■□□□□ 0.31
UPK3A-201ENST00000216211 CKAP2LQ8IYA6 745 aa17.01■□□□□ 0.31
UPK3A-201ENST00000216211 KIAA0319LQ8IZA0 1049 aa17.01■□□□□ 0.31
UPK3A-201ENST00000216211 CRIPAKQ8N1N5 446 aa17.01■□□□□ 0.31
UPK3A-201ENST00000216211 NEK9Q8TD19 979 aa17.01■□□□□ 0.31
UPK3A-201ENST00000216211 PPP1R16BQ96T49 567 aa17.01■□□□□ 0.31
UPK3A-201ENST00000216211 RNF26Q9BY78 433 aaPredicted RBP17.01■□□□□ 0.31
UPK3A-201ENST00000216211 TMX1Q9H3N1 280 aa17.01■□□□□ 0.31
UPK3A-201ENST00000216211 NCOA5Q9HCD5 579 aaKnown RBP17.01■□□□□ 0.31
UPK3A-201ENST00000216211 CD320Q9NPF0 282 aa17.01■□□□□ 0.31
UPK3A-201ENST00000216211 TBC1D22BQ9NU19 505 aa17.01■□□□□ 0.31
UPK3A-201ENST00000216211 VPS54Q9P1Q0 977 aa17.01■□□□□ 0.31
UPK3A-201ENST00000216211 MRPL42Q9Y6G3 142 aaKnown RBP17.01■□□□□ 0.31
UPK3A-201ENST00000216211 STAG3L1P0CL83 205 aa17■□□□□ 0.31
UPK3A-201ENST00000216211 IFNAR1P17181 557 aa17■□□□□ 0.31
UPK3A-201ENST00000216211 PDIA3P30101 505 aaKnown RBP17■□□□□ 0.31
UPK3A-201ENST00000216211 NFX1Q12986 1120 aaKnown RBP17■□□□□ 0.31
UPK3A-201ENST00000216211 PAN2Q504Q3 1202 aaKnown RBP17■□□□□ 0.31
UPK3A-201ENST00000216211 CMTR2Q8IYT2 770 aaKnown RBP17■□□□□ 0.31
UPK3A-201ENST00000216211 CCDC148Q8NFR7 591 aa17■□□□□ 0.31
UPK3A-201ENST00000216211 BICD2Q8TD16 824 aa17■□□□□ 0.31
UPK3A-201ENST00000216211 BBXQ8WY36 941 aaPredicted RBP17■□□□□ 0.31
UPK3A-201ENST00000216211 PABPC5Q96DU9 382 aaKnown RBP17■□□□□ 0.31
UPK3A-201ENST00000216211 C1QTNF1Q9BXJ1 281 aa17■□□□□ 0.31
UPK3A-201ENST00000216211 LMAN2LQ9H0V9 348 aa17■□□□□ 0.31
UPK3A-201ENST00000216211 ERVK-5Q9HDB9 667 aa17■□□□□ 0.31
UPK3A-201ENST00000216211 TCEAL9Q9UHQ7 104 aa17■□□□□ 0.31
UPK3A-201ENST00000216211 NOC2LQ9Y3T9 749 aaKnown RBP17■□□□□ 0.31
UPK3A-201ENST00000216211 MAFBQ9Y5Q3 323 aaPredicted RBP17■□□□□ 0.31
UPK3A-201ENST00000216211 MGEA5O60502 916 aa16.99■□□□□ 0.31
UPK3A-201ENST00000216211 RPS6KA5O75582 802 aa16.99■□□□□ 0.31
UPK3A-201ENST00000216211 PSAPP07602 524 aa16.99■□□□□ 0.31
UPK3A-201ENST00000216211 CIITAP33076 1130 aa16.99■□□□□ 0.31
UPK3A-201ENST00000216211 GATMP50440 423 aa16.99■□□□□ 0.31
UPK3A-201ENST00000216211 TOB2Q14106 344 aaPredicted RBP16.99■□□□□ 0.31
UPK3A-201ENST00000216211 FAM178BQ8IXR5 827 aa16.99■□□□□ 0.31
UPK3A-201ENST00000216211 SMAP1Q8IYB5 467 aaPredicted RBP16.99■□□□□ 0.31
UPK3A-201ENST00000216211 TMEM40Q8WWA1 233 aa16.99■□□□□ 0.31
UPK3A-201ENST00000216211 LENG9Q96B70 501 aa16.99■□□□□ 0.31
UPK3A-201ENST00000216211 BACH2Q9BYV9 841 aa16.99■□□□□ 0.31
UPK3A-201ENST00000216211 ALG13Q9NP73 1137 aaKnown RBP16.99■□□□□ 0.31
UPK3A-201ENST00000216211 CLDND1Q9NY35 253 aa16.99■□□□□ 0.31
UPK3A-201ENST00000216211 GABBR1Q9UBS5 961 aa16.99■□□□□ 0.31
UPK3A-201ENST00000216211 LRFN2Q9ULH4 789 aa16.99■□□□□ 0.31
UPK3A-201ENST00000216211 SAMM50Q9Y512 469 aa16.99■□□□□ 0.31
UPK3A-201ENST00000216211 PCDHA10Q9Y5I2 948 aa16.99■□□□□ 0.31
UPK3A-201ENST00000216211 C5orf42Q9H799 3197 aa16.99■□□□□ 0.31
UPK3A-201ENST00000216211 GRXCR2A6NFK2 248 aa16.98■□□□□ 0.31
UPK3A-201ENST00000216211 EDIL3O43854 480 aa16.98■□□□□ 0.31
UPK3A-201ENST00000216211 C22orf31O95567 290 aa16.98■□□□□ 0.31
UPK3A-201ENST00000216211 EVCP57679 992 aa16.98■□□□□ 0.31
UPK3A-201ENST00000216211 COL19A1Q14993 1142 aa16.98■□□□□ 0.31
UPK3A-201ENST00000216211 KIZQ2M2Z5 673 aa16.98■□□□□ 0.31
UPK3A-201ENST00000216211 RUFY3Q7L099 469 aa16.98■□□□□ 0.31
UPK3A-201ENST00000216211 OSMRQ99650 979 aa16.98■□□□□ 0.31
UPK3A-201ENST00000216211 PLVAPQ9BX97 442 aa16.98■□□□□ 0.31
UPK3A-201ENST00000216211 MSH4O15457 936 aa16.97■□□□□ 0.31
UPK3A-201ENST00000216211 MMP1P03956 469 aa16.97■□□□□ 0.31
UPK3A-201ENST00000216211 VTNP04004 478 aa16.97■□□□□ 0.31
UPK3A-201ENST00000216211 GTF2F1P35269 517 aaKnown RBP eCLIP16.97■□□□□ 0.31
UPK3A-201ENST00000216211 SARSP49591 514 aaKnown RBP16.97■□□□□ 0.31
UPK3A-201ENST00000216211 HYAL1Q12794 435 aa16.97■□□□□ 0.31
UPK3A-201ENST00000216211 PUS10Q3MIT2 529 aaKnown RBP16.97■□□□□ 0.31
UPK3A-201ENST00000216211 METTL13Q8N6R0 699 aa16.97■□□□□ 0.31
UPK3A-201ENST00000216211 P2RX5Q93086 422 aa16.97■□□□□ 0.31
UPK3A-201ENST00000216211 LARP6Q9BRS8 491 aaKnown RBP16.97■□□□□ 0.31
UPK3A-201ENST00000216211 ZSWIM6Q9HCJ5 1215 aa16.97■□□□□ 0.31
UPK3A-201ENST00000216211 ST3GAL5Q9UNP4 418 aa16.97■□□□□ 0.31
UPK3A-201ENST00000216211 PLAGL2Q9UPG8 496 aa16.97■□□□□ 0.31
UPK3A-201ENST00000216211 DENND3A2RUS2 1198 aa16.96■□□□□ 0.31
UPK3A-201ENST00000216211 ITGB1P05556 798 aa16.96■□□□□ 0.31
UPK3A-201ENST00000216211 DNAJB1P25685 340 aa16.96■□□□□ 0.31
UPK3A-201ENST00000216211 SSTR3P32745 418 aaPredicted RBP16.96■□□□□ 0.31
UPK3A-201ENST00000216211 LTBRP36941 435 aa16.96■□□□□ 0.31
UPK3A-201ENST00000216211 CRYBB1P53674 252 aaPredicted RBP16.96■□□□□ 0.31
UPK3A-201ENST00000216211 NLRP5P59047 1200 aa16.96■□□□□ 0.31
UPK3A-201ENST00000216211 SSRP1Q08945 709 aaKnown RBP16.96■□□□□ 0.31
UPK3A-201ENST00000216211 CAMK1Q14012 370 aa16.96■□□□□ 0.31
UPK3A-201ENST00000216211 FAM228AQ86W67 206 aa16.96■□□□□ 0.31
UPK3A-201ENST00000216211 GJD3Q8N144 294 aa16.96■□□□□ 0.31
UPK3A-201ENST00000216211 KLHL23Q8NBE8 558 aa16.96■□□□□ 0.31
UPK3A-201ENST00000216211 GJA10Q969M2 543 aa16.96■□□□□ 0.31
UPK3A-201ENST00000216211 ADAM2Q99965 735 aa16.96■□□□□ 0.31
UPK3A-201ENST00000216211 IGFLR1Q9H665 355 aa16.96■□□□□ 0.31
UPK3A-201ENST00000216211 SH3GLB2Q9NR46 395 aa16.96■□□□□ 0.31
UPK3A-201ENST00000216211 RGS18Q9NS28 235 aa16.96■□□□□ 0.31
UPK3A-201ENST00000216211 PCDHB7Q9Y5E2 793 aa16.96■□□□□ 0.31
UPK3A-201ENST00000216211 WDR64B1ANS9 1081 aa16.95■□□□□ 0.3
UPK3A-201ENST00000216211 GPR182O15218 404 aa16.95■□□□□ 0.3
UPK3A-201ENST00000216211 CHMP2AO43633 222 aa16.95■□□□□ 0.3
UPK3A-201ENST00000216211 NCK2O43639 380 aa16.95■□□□□ 0.3
UPK3A-201ENST00000216211 ZNF862O60290 1169 aa16.95■□□□□ 0.3
UPK3A-201ENST00000216211 GPR32O75388 356 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms